Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20120 Brassica napus
A03p20130 Brassica napus
A03p35740 Brassica napus
A04p21100 Brassica napus
A04p27920 Brassica napus
A04p27930 Brassica napus
A05p18350 Brassica napus
A05p39040 Brassica napus
A07p18360 Brassica napus
A07p21270 Brassica napus
A07p21310 Brassica napus
A08p15900 Brassica napus
A09p21500 Brassica napus
A09p43440 Brassica napus
A09p45980 Brassica napus
A09p68960 Brassica napus
A10p32440 Brassica napus
Aa31LG10G7830 Aethionema arabicum
Aa31LG10G8120 Aethionema arabicum
Aa31LG1G21570 Aethionema arabicum
Aa31LG3G2480 Aethionema arabicum
Aa31LG4G12450 Aethionema arabicum
Aa31LG5G21590 Aethionema arabicum
Aa31LG5G21600 Aethionema arabicum
Aa31LG5G8250 Aethionema arabicum
Aa31sc27G60 Aethionema arabicum
Aa31sc95G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3606 Anthoceros agrestis
Actinidia05450 Actinidia chinensis
Actinidia10396 Actinidia chinensis
Actinidia24185 Actinidia chinensis
Actinidia31284 Actinidia chinensis
Actinidia34710 Actinidia chinensis
Ah.08g210840 Amaranthus hybridus
Ah.08g216040 Amaranthus hybridus
AL3G21270 Arabidopsis lyrata
AL4G22560 Arabidopsis lyrata
AL4G32510 Arabidopsis lyrata
AL4G32590 Arabidopsis lyrata
AL5G33680 Arabidopsis lyrata
AL5G33710 Arabidopsis lyrata
AL6G13170 Arabidopsis lyrata
Aqoxy1G00824 Aquilegia oxysepala
Aqoxy2G01358 Aquilegia oxysepala
Aqoxy4G02859 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3U3PFL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95H5CE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A4KAB7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC2QWC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KFPL44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6BTHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NR4K5D Arachis hypogaea
AT2G27740 Arabidopsis thaliana
AT2G36355 Arabidopsis thaliana
AT2G36410 Arabidopsis thaliana
AT3G09980 Arabidopsis thaliana
AT3G52900 Arabidopsis thaliana
AT3G52920 Arabidopsis thaliana
AT5G03660 Arabidopsis thaliana
ATR0820G174 Amborella trichopoda
Atru.chr3.3357 Acer truncatum
Atru.chr8.1614 Acer truncatum
AUR62009804 Chenopodium quinoa
AUR62033550 Chenopodium quinoa
AUR62038116 Chenopodium quinoa
AUR62043077 Chenopodium quinoa
AUR62043109 Chenopodium quinoa
BcaB01g00328 Brassica carinata
BcaB01g00329 Brassica carinata
BcaB01g00331 Brassica carinata
BcaB01g03839 Brassica carinata
BcaB01g03840 Brassica carinata
BcaB02g07804 Brassica carinata
BcaB02g10111 Brassica carinata
BcaB02g10112 Brassica carinata
BcaB03g11579 Brassica carinata
BcaB06g28937 Brassica carinata
BcaB06g28938 Brassica carinata
BcaC01g04255 Brassica carinata
BcaC01g05659 Brassica carinata
BcaC01g05660 Brassica carinata
BcaC02g07595 Brassica carinata
BcaC02g07596 Brassica carinata
BcaC02g07599 Brassica carinata
BcaC02g08233 Brassica carinata
BcaC02g10902 Brassica carinata
BcaC05g26952 Brassica carinata
BcaC05g29725 Brassica carinata
BcaC06g32075 Brassica carinata
BcaC06g34382 Brassica carinata
BcaC07g39653 Brassica carinata
BcaC07g39655 Brassica carinata
BcaC08g44604 Brassica carinata
BcaC08g44609 Brassica carinata
BcaNung04563 Brassica carinata
BolC3t14751H Brassica oleracea
BolC3t14752H Brassica oleracea
BolC3t16612H Brassica oleracea
BolC4t23885H Brassica oleracea
BolC4t28022H Brassica oleracea
BolC4t28023H Brassica oleracea
BolC5t31527H Brassica oleracea
BolC5t34463H Brassica oleracea
BolC6t37260H Brassica oleracea
BolC6t37265H Brassica oleracea
BolC8t50430H Brassica oleracea
BolC9t60061H Brassica oleracea
BraA03t11262Z Brassica rapa
BraA03t11263Z Brassica rapa
BraA03t12748Z Brassica rapa
BraA04t17679Z Brassica rapa
BraA04t18283Z Brassica rapa
BraA05t22696Z Brassica rapa
BraA07t29552Z Brassica rapa
BraA07t29815Z Brassica rapa
BraA07t29818Z Brassica rapa
BraA09t37749Z Brassica rapa
BraA09t40061Z Brassica rapa
BraA10t45284Z Brassica rapa
C02p63920 Brassica napus
C03p23570 Brassica napus
C03p23580 Brassica napus
C03p43410 Brassica napus
C03p83960 Brassica napus
C04p04350 Brassica napus
C04p23920 Brassica napus
C05p28000 Brassica napus
C05p58060 Brassica napus
C06p20770 Brassica napus
C06p20800 Brassica napus
C08p28170 Brassica napus
C09p73260 Brassica napus
CAN.G1138.24 Capsicum annuum
CAN.G534.17 Capsicum annuum
CAN.G644.20 Capsicum annuum
CAN.G824.17 Capsicum annuum
CANSAT54G0979 Cannabis sativa
CANSAT56G2006 Cannabis sativa
CANSAT80G0207 Cannabis sativa
CARHR084490 Cardamine hirsuta
CARHR120440 Cardamine hirsuta
CARHR130650 Cardamine hirsuta
CARHR130710 Cardamine hirsuta
CARHR162780 Cardamine hirsuta
CARHR162800 Cardamine hirsuta
CARHR209640 Cardamine hirsuta
Carub.0003s0908 Capsella rubella
Carub.0004s0849 Capsella rubella
Carub.0004s1814 Capsella rubella
Carub.0004s1821 Capsella rubella
Carub.0004s1822 Capsella rubella
Carub.0005s1937 Capsella rubella
Carub.0005s1940 Capsella rubella
Carub.0006s0257 Capsella rubella
Ca_01672_v3 Cicer arietinum L.
Ca_08972_v3 Cicer arietinum L.
Ca_10500_v3 Cicer arietinum L.
Cc01_g09640 Coffea canephora
Cc02_g09990 Coffea canephora
Cc06_g05380 Coffea canephora
Cfa010072 Carpinus fangiana
Cfa011239 Carpinus fangiana
Cfa016558 Carpinus fangiana
Ciclev10012928m.g Citrus clementina
Ciclev10029402m.g Citrus clementina
Ciclev10032972m.g Citrus clementina
CiPaw.09G009700 Carya illinoinensis
CiPaw.10G006400 Carya illinoinensis
CiPaw.13G037300 Carya illinoinensis
CiPaw.13G139900 Carya illinoinensis
CiPaw.14G029500 Carya illinoinensis
CiPaw.14G102900 Carya illinoinensis
ClCG01G012520 Citrullus lanatus
ClCG04G009830 Citrullus lanatus
ClCG05G021660 Citrullus lanatus
ClCG10G019230 Citrullus lanatus
COL.COLO4_19956 Corchorus olitorius
COL.COLO4_20108 Corchorus olitorius
COL.COLO4_29798 Corchorus olitorius
Cpa.g.sc19.16 Carica papaya
Cpa.g.sc47.78 Carica papaya
Cpa.g.sc5.64 Carica papaya
CsaV3_1G014610 Cucumis sativus L.
CsaV3_3G036960 Cucumis sativus L.
CsaV3_5G035610 Cucumis sativus L.
CsaV3_6G040460 Cucumis sativus L.
CsaV3_7G016250 Cucumis sativus L.
CSS0010573 Camellia sinensis var. sinensis
CSS0014590 Camellia sinensis var. sinensis
CSS0016769 Camellia sinensis var. sinensis
CSS0040261 Camellia sinensis var. sinensis
DCAR_003295 Daucus carota
DCAR_007745 Daucus carota
DCAR_009138 Daucus carota
DCAR_010376 Daucus carota
DCAR_013368 Daucus carota
Dinv01490 Davidia involucrata
Dinv19840 Davidia involucrata
Dinv20807 Davidia involucrata
Dinv20808 Davidia involucrata
Dinv21243 Davidia involucrata
Dinv29437 Davidia involucrata
Dinv42584 Davidia involucrata
Duzib093G0422 Durio zibethinus
Duzib106G1466 Durio zibethinus
Duzib114G0983 Durio zibethinus
Duzib128G1404 Durio zibethinus
Duzib150G1320 Durio zibethinus
Duzib168G1030 Durio zibethinus
Duzib170G1003 Durio zibethinus
ECA232G3340 Erigeron canadensis
ECA233G0175 Erigeron canadensis
ECA233G0586 Erigeron canadensis
ECA238G4172 Erigeron canadensis
ECA248G0645 Erigeron canadensis
EL10Ac7g15782 Beta vulgaris
EL10Ac7g16971 Beta vulgaris
Eucgr.A01535 Eucalyptus grandis
Eucgr.B03885 Eucalyptus grandis
Eucgr.I00610 Eucalyptus grandis
Eucgr.I00611 Eucalyptus grandis
Eucgr.I00613 Eucalyptus grandis
Eucgr.I00618 Eucalyptus grandis
Eucgr.I01679 Eucalyptus grandis
Eucgr.J01003 Eucalyptus grandis
Eucgr.K02066 Eucalyptus grandis
FAN05G0604 Fragaria x ananassa
FAN05G3700 Fragaria x ananassa
FAN09G2556 Fragaria x ananassa
FAN11G2257 Fragaria x ananassa
FAN19G1423 Fragaria x ananassa
FAN21G3263 Fragaria x ananassa
FAN23G1439 Fragaria x ananassa
FAN23G2475 Fragaria x ananassa
FAN25G2980 Fragaria x ananassa
FAN26G3147 Fragaria x ananassa
FAN28G0119 Fragaria x ananassa
FvH4_1g24952 Fragaria vesca
FvH4_1g27500 Fragaria vesca
FvH4_3g09321 Fragaria vesca
FvH4_3g29660 Fragaria vesca
FvH4_6g18110 Fragaria vesca
Glyma.03G192100 Glycine max
Glyma.10G202700 Glycine max
Glyma.11G188000 Glycine max
Glyma.12G086500 Glycine max
Glyma.19G192600 Glycine max
Glyma.20G187600 Glycine max
Gohir.A01G208000 Gossypium hirsutum
Gohir.A04G026850 Gossypium hirsutum
Gohir.A07G108100 Gossypium hirsutum
Gohir.A09G094100 Gossypium hirsutum
Gohir.A09G137500 Gossypium hirsutum
Gohir.D01G197400 Gossypium hirsutum
Gohir.D07G111900 Gossypium hirsutum
Gohir.D09G093700 Gossypium hirsutum
Gohir.D09G137100 Gossypium hirsutum
Gorai.001G120300 Gossypium raimondii
Gorai.002G241500 Gossypium raimondii
Gorai.006G110300 Gossypium raimondii
Gorai.006G157400 Gossypium raimondii
GSVIVG01031383001 Vitis vinifera
GSVIVG01033798001 Vitis vinifera
GSVIVG01034739001 Vitis vinifera
HanXRQChr04g0094641 Helianthus annuus
HanXRQChr05g0146841 Helianthus annuus
HanXRQChr07g0197791 Helianthus annuus
HanXRQChr08g0217871 Helianthus annuus
HanXRQChr11g0351201 Helianthus annuus
HanXRQChr12g0380951 Helianthus annuus
HanXRQChr15g0491581 Helianthus annuus
HanXRQChr15g0491981 Helianthus annuus
Haze_02591 Corylus avellana
Haze_19559 Corylus avellana
Haze_23438 Corylus avellana
Hma1.2p1_0084F.1_g043370 Hydrangea macrophylla
Hma1.2p1_0246F.1_g101750 Hydrangea macrophylla
Hma1.2p1_0352F.1_g132990 Hydrangea macrophylla
Hma1.2p1_0646F.1_g194990 Hydrangea macrophylla
HPP92_005461 Vanilla planifolia
Hund04040 Selenicereus undatus
Hund18733 Selenicereus undatus
Hund19283 Selenicereus undatus
Lalb_Chr02g0151421 Lupinus albus
Lalb_Chr19g0136711 Lupinus albus
Lalb_Chr20g0112121 Lupinus albus
Lalb_Chr25g0288601 Lupinus albus
Lj1g0019636 Lotus japonicus
Lj2A991T87 Lonicera japonica
Lj2C131G2 Lonicera japonica
Lj2C29T21 Lonicera japonica
Lj3A1002G51 Lonicera japonica
Lj3g0001526 Lotus japonicus
Lj5g0018470 Lotus japonicus
Lsat_1_v5_gn_0_7361 Lactuca sativa
Lsat_1_v5_gn_1_48540 Lactuca sativa
Lsat_1_v5_gn_2_95641 Lactuca sativa
Lsat_1_v5_gn_6_41721 Lactuca sativa
Lsat_1_v5_gn_6_70780 Lactuca sativa
Manes.04G007200 Manihot esculenta
Manes.07G089500 Manihot esculenta
Manes.08G022200 Manihot esculenta
Manes.10G057100 Manihot esculenta
Manes.11G158800 Manihot esculenta
Mapoly0038s0078 Marchantia polymorpha
MBI01_g05551_MAGBIO Magnolia biondii
MD02G1248700 Malus domestica
MD02G1248800 Malus domestica
MD03G1136300 Malus domestica
MD07G1067500 Malus domestica
MD11G1158600 Malus domestica
MD12G1019800 Malus domestica
MD12G1020200 Malus domestica
MD14G1017400 Malus domestica
Medtr1g492930 Medicago truncatula
Medtr2g085025 Medicago truncatula
Medtr7g104020 Medicago truncatula
MELO3C004756.2 Cucumis melo
MELO3C009443.2 Cucumis melo
MELO3C012362.2 Cucumis melo
MELO3C024522.2 Cucumis melo
Migut.F00895 Erythranthe guttata
Migut.F01642 Erythranthe guttata
Migut.J00976 Erythranthe guttata
Migut.N02509 Erythranthe guttata
MSTRG.17720 Avicennia marina
MSTRG.18737 Avicennia marina
MSTRG.19237 Avicennia marina
MSTRG.27523 Avicennia marina
MSTRG.5815 Avicennia marina
MSTRG.9108 Avicennia marina
Nitab4.5_0000132g0090 Nicotiana tabacum
Nitab4.5_0000962g0030 Nicotiana tabacum
Nitab4.5_0000963g0040 Nicotiana tabacum
Nitab4.5_0003454g0030 Nicotiana tabacum
Nitab4.5_0003541g0050 Nicotiana tabacum
Nitab4.5_0005390g0050 Nicotiana tabacum
Nitab4.5_0006089g0030 Nicotiana tabacum
Nitab4.5_0022552g0010 Nicotiana tabacum
Nn2g14049 Nelumbo nucifera
Nn6g35015 Nelumbo nucifera
Oeu018723.1 Olea europaea
Oeu030499.1 Olea europaea
Oeu032418.1 Olea europaea
Oeu039816.1 Olea europaea
Oeu040529.1 Olea europaea
Oeu042278.1 Olea europaea
Oeu050192.1 Olea europaea
Oeu050193.1 Olea europaea
Oeu052893.1 Olea europaea
Oeu058279.1 Olea europaea
Os02g0528100 Oryza sativa ssp. japonica
Os04g0408600 Oryza sativa ssp. japonica
Peaxi162Scf00002g05425 Petunia axillaris
Peaxi162Scf00068g00034 Petunia axillaris
Peaxi162Scf00163g00217 Petunia axillaris
Peaxi162Scf00244g01120 Petunia axillaris
PGR004G1543 Punica granatum
PGR044G2729 Punica granatum
PGR102G0613 Punica granatum
PGR142G1757 Punica granatum
PGSC0003DMG400002711 Solanum tuberosum
PGSC0003DMG400019496 Solanum tuberosum
PGSC0003DMG400026542 Solanum tuberosum
PGSC0003DMG400028170 Solanum tuberosum
Phvul.001G187400 Phaseolus vulgaris
Phvul.007G104200 Phaseolus vulgaris
Phvul.011G091600 Phaseolus vulgaris
Potri.004G186900 Populus trichocarpa
Potri.006G115400 Populus trichocarpa
Potri.009G147500 Populus trichocarpa
Potri.010G235600 Populus trichocarpa
Pp3c4_24280 Physcomitrium patens
Prupe.2G084700 Prunus persica
Prupe.6G121000 Prunus persica
Prupe.7G115700 Prunus persica
Psat3g035200 Pisum sativum
Psat5g255800 Pisum sativum
Psat6g176880 Pisum sativum
PSO339G3783 Papaver somniferum
PSO384G1686 Papaver somniferum
PSO443G0050 Papaver somniferum
QL01p013415 Quercus lobata
QL04p042565 Quercus lobata
QL04p042580 Quercus lobata
QL07p040067 Quercus lobata
RcHm_v2.0_Chr3g0472381 Rosa chinensis
RcHm_v2.0_Chr3g0489011 Rosa chinensis
RcHm_v2.0_Chr5g0055021 Rosa chinensis
Rhsim03G0079200 Rhododendron simsii
Rhsim03G0079800 Rhododendron simsii
Rhsim04G0134900 Rhododendron simsii
Rhsim13G0106700 Rhododendron simsii
RhsimUnG0042300 Rhododendron simsii
Sabra04G0125900 Salix brachista
Sabra06G0090300 Salix brachista
Sabra09G0113700 Salix brachista
Sabra09G0116200 Salix brachista
Sabra10G0182700 Salix brachista
SalBow3G0840 Salvia bowleyana
SalBow3G4143 Salvia bowleyana
SalBow3G4507 Salvia bowleyana
SalBow6G2283 Salvia bowleyana
SalBow6G4984 Salvia bowleyana
Sc02g0001090 Simmondsia chinensis
Sc05g0003410 Simmondsia chinensis
Sc07g0005400 Simmondsia chinensis
Sc12g0004260 Simmondsia chinensis
Sed0001596 Sechium edule
Sed0004160 Sechium edule
Sed0008393 Sechium edule
Sed0016219 Sechium edule
Sed0025714 Sechium edule
SGA_v2.0_scaffold15G07423 Striga asiatica
SGA_v2.0_scaffold27G11625 Striga asiatica
SGA_v2.0_scaffold4G02307 Striga asiatica
SGA_v2.0_scaffold62G21350 Striga asiatica
SGA_v2.0_scaffold710G53496 Striga asiatica
SGA_v2.0_scaffold71G23897 Striga asiatica
SGA_v2.0_scaffold75G24791 Striga asiatica
SGA_v2.0_scaffold83G26421 Striga asiatica
Solyc10g083520.2 Solanum lycopersicum
Solyc11g007330.2 Solanum lycopersicum
Solyc11g066970.3 Solanum lycopersicum
Sopen09g003940 Solanum pennellii
Sopen10g032990 Solanum pennellii
Sopen11g003220 Solanum pennellii
Sopen11g026690 Solanum pennellii
Sp3g08320 Schrenkiella parvula
Sp4g10570 Schrenkiella parvula
Sp4g18700 Schrenkiella parvula
Sp4g18710 Schrenkiella parvula
Sp5g09410 Schrenkiella parvula
Sp5g09440 Schrenkiella parvula
Sp6g39070 Schrenkiella parvula
TAR369G0967 Trochodendron aralioides
TAR623G0765 Trochodendron aralioides
TAR633G0289 Trochodendron aralioides
TAR636G3651 Trochodendron aralioides
THA.LOC104800548 Tarenaya hassleriana
THA.LOC104823107 Tarenaya hassleriana
THA.LOC104823227 Tarenaya hassleriana
THA.LOC104823463 Tarenaya hassleriana
THA.LOC104826930 Tarenaya hassleriana
THA.LOC104827507 Tarenaya hassleriana
Thecc.05G083200 Theobroma cacao
Thecc.09G289800 Theobroma cacao
Thecc.10G104800 Theobroma cacao
Thhalv10010763m.g Eutrema salsugineum
Thhalv10010775m.g Eutrema salsugineum
Thhalv10014828m.g Eutrema salsugineum
Thhalv10017290m.g Eutrema salsugineum
Thhalv10017323m.g Eutrema salsugineum
Thhalv10021627m.g Eutrema salsugineum
TPR.G23399 Trifolium pratense
TPR.G2502 Trifolium pratense
TPR.G25372 Trifolium pratense
TPR.G8933 Trifolium pratense
TWI38G2326 Tripterygium wilfordii
TWI53G1386 Tripterygium wilfordii
TWI75G0553 Tripterygium wilfordii
TWI77G0148 Tripterygium wilfordii
TWI79G1399 Tripterygium wilfordii
unitig_26.g9246 Utricularia gibba
unitig_578.g15764 Utricularia gibba
unitig_736.g22529 Utricularia gibba
unitig_744.g24692 Utricularia gibba
unitig_749.g14290 Utricularia gibba
vmacro03287 Vaccinium macrocarpon
vmacro07381 Vaccinium macrocarpon
vmacro08823 Vaccinium macrocarpon
vmacro10291 Vaccinium macrocarpon
VMungo0720G2072 Vigna mungo
VMungo1383G3133 Vigna mungo
Zm00001eb242600 Zea mays
Zm00001eb421850 Zea mays

User provided reference genes

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