Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24800 Brassica napus
A06p09770 Brassica napus
A06p35220 Brassica napus
A06p35230 Brassica napus
A06p35250 Brassica napus
A06p35260 Brassica napus
A09p62850 Brassica napus
Aa31LG11G3670 Aethionema arabicum
Aa31LG11G3680 Aethionema arabicum
Aa31LG1G1220 Aethionema arabicum
Aa31LG4G17910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1387 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.269 Anthoceros agrestis
Actinidia08681 Actinidia chinensis
Actinidia19911 Actinidia chinensis
Actinidia31935 Actinidia chinensis
Actinidia34253 Actinidia chinensis
Actinidia39376 Actinidia chinensis
Ah.03g138820 Amaranthus hybridus
Ah.07g204940 Amaranthus hybridus
Ah.07g204950 Amaranthus hybridus
AL1G25490 Arabidopsis lyrata
AL5G29120 Arabidopsis lyrata
AL6G35980 Arabidopsis lyrata
AL6G35990 Arabidopsis lyrata
AL6G36000 Arabidopsis lyrata
Aqoxy2G00331 Aquilegia oxysepala
Aqoxy3G03646 Aquilegia oxysepala
Aqoxy7G00022 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0FQ4XJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1CQ8VL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2PPB1V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5D48CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2PSPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BURC06 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5IZYY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6G9VX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J42BJ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJVE6S Arachis hypogaea
AT1G13700 Arabidopsis thaliana
AT3G49360 Arabidopsis thaliana
AT5G24400 Arabidopsis thaliana
AT5G24410 Arabidopsis thaliana
AT5G24420 Arabidopsis thaliana
ATR0620G022 Amborella trichopoda
ATR0684G139 Amborella trichopoda
ATR0827G007 Amborella trichopoda
Atru.chr11.1606 Acer truncatum
Atru.chr12.2335 Acer truncatum
Atru.chr12.2336 Acer truncatum
AUR62003084 Chenopodium quinoa
AUR62006033 Chenopodium quinoa
AUR62006034 Chenopodium quinoa
AUR62007901 Chenopodium quinoa
AUR62035593 Chenopodium quinoa
AUR62037907 Chenopodium quinoa
AUR62040159 Chenopodium quinoa
BcaB04g19826 Brassica carinata
BcaB04g19827 Brassica carinata
BcaB05g23102 Brassica carinata
BcaB08g34319 Brassica carinata
BcaC04g23538 Brassica carinata
BcaC05g25276 Brassica carinata
BcaC07g41627 Brassica carinata
BcaC09g49943 Brassica carinata
BcaNung01230 Brassica carinata
BcaNung01231 Brassica carinata
BcaNung01232 Brassica carinata
BcaNung01233 Brassica carinata
BcaNung02023 Brassica carinata
BcaNung02024 Brassica carinata
BcaNung02025 Brassica carinata
BcaNung02027 Brassica carinata
BcaNung02028 Brassica carinata
BcaNung02032 Brassica carinata
BcaNung02033 Brassica carinata
BolC1t03027H Brassica oleracea
BolC5t29902H Brassica oleracea
BolC7t44850H Brassica oleracea
BolC7t44851H Brassica oleracea
BolC7t44852H Brassica oleracea
BolC7t44855H Brassica oleracea
BolC7t44856H Brassica oleracea
BolC7t44860H Brassica oleracea
BolC7t44861H Brassica oleracea
BolC8t52182H Brassica oleracea
BolC9t53639H Brassica oleracea
BraA01t02390Z Brassica rapa
BraA06t24167Z Brassica rapa
BraA06t26444Z Brassica rapa
BraA06t26445Z Brassica rapa
BraA06t26447Z Brassica rapa
BraA06t26449Z Brassica rapa
BraA06t26451Z Brassica rapa
BraA09t36296Z Brassica rapa
BraA09t41646Z Brassica rapa
C01p30930 Brassica napus
C05p11530 Brassica napus
C07p43250 Brassica napus
C07p43260 Brassica napus
C07p43280 Brassica napus
C07p43320 Brassica napus
C07p43330 Brassica napus
C08p46330 Brassica napus
CAN.G1527.5 Capsicum annuum
CAN.G707.19 Capsicum annuum
CANSAT21G1432 Cannabis sativa
CANSAT64G2860 Cannabis sativa
CARHR014100 Cardamine hirsuta
CARHR158300 Cardamine hirsuta
CARHR189000 Cardamine hirsuta
CARHR189010 Cardamine hirsuta
CARHR189020 Cardamine hirsuta
Carub.0001s1344 Capsella rubella
Carub.0006s2223 Capsella rubella
Carub.0006s2224 Capsella rubella
Carub.0006s2225 Capsella rubella
Ca_04998_v3 Cicer arietinum L.
Ca_12693_v3 Cicer arietinum L.
Ca_12695_v3 Cicer arietinum L.
Ca_16750_v3 Cicer arietinum L.
Ca_16769_v3 Cicer arietinum L.
CBR_g17115 Chara braunii
Cc00_g19480 Coffea canephora
Cc00_g19500 Coffea canephora
Cc00_g22420 Coffea canephora
Cc00_g29540 Coffea canephora
Cc02_g01030 Coffea canephora
Cc02_g01040 Coffea canephora
Cc07_g18280 Coffea canephora
Cc08_g07990 Coffea canephora
Cc11_g11830 Coffea canephora
CDE02G1730 Ceratophyllum demersum
CDE04G0631 Ceratophyllum demersum
CDE04G1567 Ceratophyllum demersum
CDE07G0005 Ceratophyllum demersum
CDE07G0261 Ceratophyllum demersum
CDE11G0699 Ceratophyllum demersum
Cfa008865 Carpinus fangiana
Cfa016184 Carpinus fangiana
Cfa016185 Carpinus fangiana
Cfa016186 Carpinus fangiana
Ciclev10002054m.g Citrus clementina
Ciclev10021162m.g Citrus clementina
Ciclev10032440m.g Citrus clementina
CiPaw.01G213300 Carya illinoinensis
CiPaw.05G124000 Carya illinoinensis
CiPaw.05G201800 Carya illinoinensis
CiPaw.06G043100 Carya illinoinensis
CiPaw.06G093100 Carya illinoinensis
CiPaw.07G072300 Carya illinoinensis
CiPaw.16G111400 Carya illinoinensis
ClCG01G000180 Citrullus lanatus
ClCG01G000190 Citrullus lanatus
ClCG05G023630 Citrullus lanatus
COL.COLO4_00253 Corchorus olitorius
COL.COLO4_03557 Corchorus olitorius
COL.COLO4_14339 Corchorus olitorius
Cpa.g.sc1.149 Carica papaya
Cpa.g.sc3.135 Carica papaya
Cpa.g.sc36.1 Carica papaya
Cre01.g034400 Chlamydomonas reinhardtii
Cre08.g370650 Chlamydomonas reinhardtii
CsaV3_5G000220 Cucumis sativus L.
CsaV3_5G000230 Cucumis sativus L.
CsaV3_5G033390 Cucumis sativus L.
CSS0005477 Camellia sinensis var. sinensis
CSS0010525 Camellia sinensis var. sinensis
CSS0020627 Camellia sinensis var. sinensis
DCAR_007201 Daucus carota
DCAR_014555 Daucus carota
DCAR_015935 Daucus carota
DCAR_015936 Daucus carota
DCAR_020354 Daucus carota
DCAR_026682 Daucus carota
DCAR_030046 Daucus carota
Dinv02486 Davidia involucrata
Dinv02487 Davidia involucrata
Dinv20155 Davidia involucrata
Dinv29232 Davidia involucrata
Dinv29233 Davidia involucrata
Dinv34054 Davidia involucrata
Duzib041G0291 Durio zibethinus
Duzib084G0582 Durio zibethinus
Duzib248G0681 Durio zibethinus
Duzib251G0170 Durio zibethinus
Duzib268G1629 Durio zibethinus
ECA233G4794 Erigeron canadensis
ECA234G3813 Erigeron canadensis
ECA240G2813 Erigeron canadensis
EL10Ac3g05212 Beta vulgaris
EL10Ac3g05213 Beta vulgaris
EL10Ac6g15016 Beta vulgaris
Eucgr.A01425 Eucalyptus grandis
Eucgr.B03143 Eucalyptus grandis
Eucgr.G02431 Eucalyptus grandis
Eucgr.K00011 Eucalyptus grandis
Eucgr.K00013 Eucalyptus grandis
Eucgr.K00414 Eucalyptus grandis
FAN01G1403 Fragaria x ananassa
FAN03G1236 Fragaria x ananassa
FAN07G0080 Fragaria x ananassa
FAN10G0164 Fragaria x ananassa
FAN10G1901 Fragaria x ananassa
FAN12G1870 Fragaria x ananassa
FAN17G1147 Fragaria x ananassa
FAN22G1339 Fragaria x ananassa
FvH4_4g29730 Fragaria vesca
FvH4_7g32550 Fragaria vesca
Glyma.01G062000 Glycine max
Glyma.02G120200 Glycine max
Glyma.04G231600 Glycine max
Glyma.06G133500 Glycine max
Glyma.14G161800 Glycine max
Glyma.14G162000 Glycine max
Gohir.A03G105200 Gossypium hirsutum
Gohir.A06G041300 Gossypium hirsutum
Gohir.A12G247400 Gossypium hirsutum
Gohir.A13G084298 Gossypium hirsutum
Gohir.D02G130500 Gossypium hirsutum
Gohir.D06G042200 Gossypium hirsutum
Gohir.D12G248100 Gossypium hirsutum
Gohir.D13G083400 Gossypium hirsutum
Gorai.005G146400 Gossypium raimondii
Gorai.008G266100 Gossypium raimondii
Gorai.010G047500 Gossypium raimondii
Gorai.013G095200 Gossypium raimondii
GSVIVG01012236001 Vitis vinifera
GSVIVG01038616001 Vitis vinifera
HanXRQChr03g0062851 Helianthus annuus
HanXRQChr03g0062861 Helianthus annuus
HanXRQChr03g0063041 Helianthus annuus
HanXRQChr03g0063051 Helianthus annuus
HanXRQChr08g0212031 Helianthus annuus
HanXRQChr08g0225691 Helianthus annuus
HanXRQChr12g0363171 Helianthus annuus
HanXRQChr17g0568401 Helianthus annuus
Haze_00270 Corylus avellana
Haze_11888 Corylus avellana
Hma1.2p1_0094F.1_g047160 Hydrangea macrophylla
Hma1.2p1_0094F.1_g047170 Hydrangea macrophylla
Hma1.2p1_0566F.1_g179920 Hydrangea macrophylla
HPP92_020453 Vanilla planifolia
HPP92_022343 Vanilla planifolia
HPP92_022353 Vanilla planifolia
HPP92_025870 Vanilla planifolia
Hund05830 Selenicereus undatus
Hund21037 Selenicereus undatus
Hund25166 Selenicereus undatus
Lalb_Chr04g0255581 Lupinus albus
Lalb_Chr08g0239891 Lupinus albus
Lalb_Chr10g0101791 Lupinus albus
Lalb_Chr10g0101801 Lupinus albus
Lalb_Chr11g0067181 Lupinus albus
Lalb_Chr17g0343811 Lupinus albus
Lalb_Chr17g0343821 Lupinus albus
Lj1A565G21 Lonicera japonica
Lj1C1025T12 Lonicera japonica
Lj1g0008112 Lotus japonicus
Lj1g0011948 Lotus japonicus
Lj1g0015395 Lotus japonicus
Lj1g0024039 Lotus japonicus
Lj1g0025875 Lotus japonicus
Lj2g0026908 Lotus japonicus
Lj3A1029G40 Lonicera japonica
Lj3A898T33 Lonicera japonica
Lj3A902G27 Lonicera japonica
Lj6A777G37 Lonicera japonica
Lju1074C0T5 Lonicera japonica
Lsat_1_v5_gn_7_43640 Lactuca sativa
Lsat_1_v5_gn_7_43660 Lactuca sativa
Lsat_1_v5_gn_8_45981 Lactuca sativa
Lsat_1_v5_gn_8_4640 Lactuca sativa
Manes.01G026800 Manihot esculenta
Manes.01G038700 Manihot esculenta
Manes.05G112500 Manihot esculenta
Manes.05G193300 Manihot esculenta
Manes.18G073581 Manihot esculenta
Mapoly0009s0152 Marchantia polymorpha
MBI03_g11147_MAGBIO Magnolia biondii
MBI12_g02420_MAGBIO Magnolia biondii
MBI16_g03098_MAGBIO Magnolia biondii
MBI19_g43180_MAGBIO Magnolia biondii
MCO10G194 Micromonas commoda
MCO14G581 Micromonas commoda
MD01G1226300 Malus domestica
MD07G1296700 Malus domestica
MD13G1060200 Malus domestica
MD16G1059500 Malus domestica
Medtr1g028320 Medicago truncatula
Medtr1g028330 Medicago truncatula
Medtr3g092110 Medicago truncatula
Medtr5g045000 Medicago truncatula
MELO3C005909.2 Cucumis melo
MELO3C005910.2 Cucumis melo
MELO3C012159.2 Cucumis melo
Migut.E00043 Erythranthe guttata
Migut.F00167 Erythranthe guttata
Migut.F01002 Erythranthe guttata
MSTRG.13453 Avicennia marina
MSTRG.26996 Avicennia marina
MSTRG.8538 Avicennia marina
MSTRG.8622 Avicennia marina
Nitab4.5_0000115g0010 Nicotiana tabacum
Nitab4.5_0000231g0050 Nicotiana tabacum
Nitab4.5_0000319g0320 Nicotiana tabacum
Nitab4.5_0000319g0350 Nicotiana tabacum
Nitab4.5_0001118g0020 Nicotiana tabacum
Nitab4.5_0003332g0050 Nicotiana tabacum
Nitab4.5_0006368g0010 Nicotiana tabacum
Nitab4.5_0007028g0020 Nicotiana tabacum
Nitab4.5_0007734g0030 Nicotiana tabacum
Nitab4.5_0008776g0010 Nicotiana tabacum
Nitab4.5_0009056g0010 Nicotiana tabacum
Nitab4.5_0009056g0020 Nicotiana tabacum
Nitab4.5_0011053g0020 Nicotiana tabacum
Nitab4.5_0011053g0030 Nicotiana tabacum
Nn1g00384 Nelumbo nucifera
Nn1g00684 Nelumbo nucifera
Nn1g08923 Nelumbo nucifera
Nn3g17492 Nelumbo nucifera
Nn3g18807 Nelumbo nucifera
Nn4g23478 Nelumbo nucifera
Nn5g28069 Nelumbo nucifera
Oeu001878.1 Olea europaea
Oeu005726.2 Olea europaea
Oeu008566.1 Olea europaea
Oeu008568.1 Olea europaea
Oeu020364.3 Olea europaea
Oeu026024.1 Olea europaea
Oeu031533.1 Olea europaea
Oeu037037.1 Olea europaea
Os03g0416500 Oryza sativa ssp. japonica
Os07g0604000 Oryza sativa ssp. japonica
Os08g0547100 Oryza sativa ssp. japonica
Os09g0529100 Oryza sativa ssp. japonica
Peaxi162Scf00026g01511 Petunia axillaris
Peaxi162Scf00175g00519 Petunia axillaris
Peaxi162Scf00618g00115 Petunia axillaris
Peaxi162Scf00618g00124 Petunia axillaris
Peaxi162Scf00740g00559 Petunia axillaris
PGR102G0999 Punica granatum
PGR102G2143 Punica granatum
PGR119G2198 Punica granatum
PGR142G0096 Punica granatum
PGR142G1259 Punica granatum
PGSC0003DMG400005471 Solanum tuberosum
PGSC0003DMG400018511 Solanum tuberosum
PGSC0003DMG400021890 Solanum tuberosum
PGSC0003DMG400028363 Solanum tuberosum
PGSC0003DMG401026150 Solanum tuberosum
PGSC0003DMG402026150 Solanum tuberosum
Phvul.003G040800 Phaseolus vulgaris
Phvul.009G049100 Phaseolus vulgaris
Phvul.009G049200 Phaseolus vulgaris
Phvul.009G049300 Phaseolus vulgaris
Potri.008G097200 Populus trichocarpa
Potri.010G157200 Populus trichocarpa
Potri.012G020100 Populus trichocarpa
Potri.012G024400 Populus trichocarpa
Potri.015G007200 Populus trichocarpa
Potri.015G007300 Populus trichocarpa
Potri.015G008401 Populus trichocarpa
Pp3c24_17310 Physcomitrium patens
Pp3c2_37930 Physcomitrium patens
PRCOL_00006701 Prasinoderma coloniale
Prupe.1G289200 Prunus persica
Prupe.2G316300 Prunus persica
Psat0s4047g0040 Pisum sativum
Psat2g131640 Pisum sativum
Psat5g074120 Pisum sativum
Psat5g198560 Pisum sativum
Psat5g200720 Pisum sativum
Psat6g038760 Pisum sativum
Psat6g039000 Pisum sativum
Psat6g133960 Pisum sativum
PSO017G2436 Papaver somniferum
PSO017G5150 Papaver somniferum
PSO210G0788 Papaver somniferum
PSO210G2998 Papaver somniferum
PSO478G2896 Papaver somniferum
QL03p073776 Quercus lobata
QL05p021139 Quercus lobata
QL09p007520 Quercus lobata
RcHm_v2.0_Chr1g0382391 Rosa chinensis
RcHm_v2.0_Chr4g0437981 Rosa chinensis
Rhsim01G0187800 Rhododendron simsii
Rhsim01G0188900 Rhododendron simsii
Rhsim01G0189000 Rhododendron simsii
Rhsim03G0212900 Rhododendron simsii
Rhsim03G0213000 Rhododendron simsii
Rhsim09G0126100 Rhododendron simsii
Rhsim09G0208500 Rhododendron simsii
Rhsim12G0074200 Rhododendron simsii
Sabra08G0073400 Salix brachista
Sabra10G0119300 Salix brachista
Sabra12G0006300 Salix brachista
Sabra12G0009700 Salix brachista
SalBow4G2404 Salvia bowleyana
SalBow8G0841 Salvia bowleyana
Sc04g0007490 Simmondsia chinensis
Sc11g0002540 Simmondsia chinensis
Sc19g0000690 Simmondsia chinensis
Sed0001642 Sechium edule
Sed0007422 Sechium edule
Sed0008471 Sechium edule
Sed0012736 Sechium edule
SEGI_15056 Sequoiadendron giganteum
SEGI_33168 Sequoiadendron giganteum
SEGI_34817 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08451 Striga asiatica
SGA_v2.0_scaffold18G08452 Striga asiatica
SGA_v2.0_scaffold18G08455 Striga asiatica
SGA_v2.0_scaffold269G46284 Striga asiatica
SGA_v2.0_scaffold44G16833 Striga asiatica
SGA_v2.0_scaffold90G27625 Striga asiatica
SGA_v2.0_scaffold922G53728 Striga asiatica
SMO146G0330 Selaginella moellendorffii
SMO356G0538 Selaginella moellendorffii
Solyc01g010250.4 Solanum lycopersicum
Solyc03g082580.3 Solanum lycopersicum
Solyc05g012110.4 Solanum lycopersicum
Solyc06g053200.3 Solanum lycopersicum
Solyc07g066270.4 Solanum lycopersicum
Sopen01g005860 Solanum pennellii
Sopen03g022340 Solanum pennellii
Sopen05g006900 Solanum pennellii
Sopen06g018270 Solanum pennellii
Sopen07g034450 Solanum pennellii
Sp1g12210 Schrenkiella parvula
Sp2g22910 Schrenkiella parvula
Sp2g22920 Schrenkiella parvula
Sp2g22930 Schrenkiella parvula
Sp5g12710 Schrenkiella parvula
TAR371G0880 Trochodendron aralioides
TAR374G1416 Trochodendron aralioides
TAR375G0437 Trochodendron aralioides
TAR375G0956 Trochodendron aralioides
TAR376G0509 Trochodendron aralioides
TAR629G0031 Trochodendron aralioides
TAR629G3069 Trochodendron aralioides
THA.LOC104803337 Tarenaya hassleriana
THA.LOC104805205 Tarenaya hassleriana
THA.LOC104814946 Tarenaya hassleriana
Thecc.02G328000 Theobroma cacao
Thecc.03G205500 Theobroma cacao
Thecc.08G117700 Theobroma cacao
Thhalv10003261m.g Eutrema salsugineum
Thhalv10004579m.g Eutrema salsugineum
Thhalv10004809m.g Eutrema salsugineum
Thhalv10008475m.g Eutrema salsugineum
Thhalv10010648m.g Eutrema salsugineum
TPR.G11013 Trifolium pratense
TPR.G23759 Trifolium pratense
TPR.G33313 Trifolium pratense
TPR.G33342 Trifolium pratense
TPR.G33353 Trifolium pratense
TPR.G33636 Trifolium pratense
TPR.G33638 Trifolium pratense
TWI14G1250 Tripterygium wilfordii
TWI36G0411 Tripterygium wilfordii
TWI53G1415 Tripterygium wilfordii
TWI75G0246 Tripterygium wilfordii
TWI79G0490 Tripterygium wilfordii
unitig_21.g20865 Utricularia gibba
unitig_744.g24289 Utricularia gibba
unitig_748.g7284 Utricularia gibba
vmacro01313 Vaccinium macrocarpon
vmacro06422 Vaccinium macrocarpon
vmacro06423 Vaccinium macrocarpon
vmacro10149 Vaccinium macrocarpon
vmacro10436 Vaccinium macrocarpon
vmacro12707 Vaccinium macrocarpon
vmacro12708 Vaccinium macrocarpon
VMungo1215G0172 Vigna mungo
VMungo1309G0500 Vigna mungo
VMungo1309G2640 Vigna mungo
Zm00001eb020090 Zea mays
Zm00001eb040260 Zea mays
Zm00001eb103260 Zea mays
Zm00001eb326960 Zea mays

User provided reference genes

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