Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26680 Brassica napus
A04p20880 Brassica napus
A04p27630 Brassica napus
A05p09720 Brassica napus
Aa31LG4G13820 Aethionema arabicum
Aa31LG5G21230 Aethionema arabicum
Aa31LG5G8720 Aethionema arabicum
Actinidia05398 Actinidia chinensis
Actinidia07262 Actinidia chinensis
Actinidia22229 Actinidia chinensis
Actinidia24232 Actinidia chinensis
Actinidia24883 Actinidia chinensis
Actinidia35473 Actinidia chinensis
Actinidia37071 Actinidia chinensis
Ah.08g210360 Amaranthus hybridus
AL4G21260 Arabidopsis lyrata
AL4G32180 Arabidopsis lyrata
AL5G22470 Arabidopsis lyrata
Aqoxy2G01050 Aquilegia oxysepala
Aqoxy2G03288 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45DTJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9RJM5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCEI7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9YQVF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D86BWP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1GWNH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VP0AEQ Arachis hypogaea
AT2G27310 Arabidopsis thaliana
AT2G36090 Arabidopsis thaliana
AT3G44326 Arabidopsis thaliana
ATR0081G028 Amborella trichopoda
ATR0579G049 Amborella trichopoda
ATR0626G411 Amborella trichopoda
Atru.chr3.3162 Acer truncatum
Atru.chr3.3165 Acer truncatum
Atru.chr5.1400 Acer truncatum
Atru.chr5.2517 Acer truncatum
Atru.chr8.1438 Acer truncatum
Atru.chr9.1836 Acer truncatum
AUR62006243 Chenopodium quinoa
AUR62028481 Chenopodium quinoa
AUR62038061 Chenopodium quinoa
AUR62038187 Chenopodium quinoa
BcaB01g03064 Brassica carinata
BcaB02g09385 Brassica carinata
BcaB06g28141 Brassica carinata
BcaB06g28914 Brassica carinata
BcaC01g04933 Brassica carinata
BcaC02g07632 Brassica carinata
BcaC02g08249 Brassica carinata
BcaC02g08250 Brassica carinata
BcaC02g08252 Brassica carinata
BcaC02g11710 Brassica carinata
BNapus_Darmor_BZH_scaffold_239p00140 Brassica napus
BolC3t15538H Brassica oleracea
BolC4t22851H Brassica oleracea
BolC4t27201H Brassica oleracea
BolC4t27993H Brassica oleracea
BraA03t11879Z Brassica rapa
BraA04t17659Z Brassica rapa
BraA04t18258Z Brassica rapa
BraA05t19928Z Brassica rapa
C03p31960 Brassica napus
C04p12100 Brassica napus
C04p56690 Brassica napus
C04p65140 Brassica napus
CAN.G242.18 Capsicum annuum
CAN.G745.20 Capsicum annuum
CAN.G841.16 Capsicum annuum
CANSAT25G2734 Cannabis sativa
CANSAT54G0611 Cannabis sativa
CANSAT64G2696 Cannabis sativa
CARHR104560 Cardamine hirsuta
CARHR119880 Cardamine hirsuta
CARHR130340 Cardamine hirsuta
Carub.0004s0794 Capsella rubella
Carub.0004s1783 Capsella rubella
Carub.0005s1004 Capsella rubella
Ca_01646_v3 Cicer arietinum L.
Ca_09027_v3 Cicer arietinum L.
Ca_09762_v3 Cicer arietinum L.
Ca_19444_v3 Cicer arietinum L.
Ca_25954_v3 Cicer arietinum L.
Cc01_g08790 Coffea canephora
Cc01_g19610 Coffea canephora
Cc06_g06220 Coffea canephora
CDE02G1508 Ceratophyllum demersum
CDE04G2896 Ceratophyllum demersum
CDE08G1152 Ceratophyllum demersum
Cfa006127 Carpinus fangiana
Cfa009984 Carpinus fangiana
Cfa011889 Carpinus fangiana
Cfa016651 Carpinus fangiana
Ciclev10010153m.g Citrus clementina
Ciclev10010559m.g Citrus clementina
Ciclev10012029m.g Citrus clementina
Ciclev10012130m.g Citrus clementina
Ciclev10012142m.g Citrus clementina
Ciclev10013482m.g Citrus clementina
Ciclev10013808m.g Citrus clementina
Ciclev10023799m.g Citrus clementina
Ciclev10028740m.g Citrus clementina
Ciclev10028746m.g Citrus clementina
Ciclev10028749m.g Citrus clementina
Ciclev10029080m.g Citrus clementina
CiPaw.07G092700 Carya illinoinensis
CiPaw.08G104500 Carya illinoinensis
CiPaw.09G017700 Carya illinoinensis
CiPaw.10G012700 Carya illinoinensis
CiPaw.11G108800 Carya illinoinensis
CiPaw.13G132900 Carya illinoinensis
CiPaw.14G097700 Carya illinoinensis
ClCG02G022300 Citrullus lanatus
ClCG10G018690 Citrullus lanatus
COL.COLO4_09116 Corchorus olitorius
COL.COLO4_10842 Corchorus olitorius
COL.COLO4_22634 Corchorus olitorius
COL.COLO4_29666 Corchorus olitorius
Cpa.g.c31932.1 Carica papaya
Cpa.g.sc195.30 Carica papaya
Cpa.g.sc195.31 Carica papaya
CsaV3_3G037540 Cucumis sativus L.
CsaV3_6G038430 Cucumis sativus L.
CSS0001600 Camellia sinensis var. sinensis
CSS0018930 Camellia sinensis var. sinensis
CSS0023210 Camellia sinensis var. sinensis
CSS0030350 Camellia sinensis var. sinensis
CSS0031216 Camellia sinensis var. sinensis
DCAR_002742 Daucus carota
DCAR_006172 Daucus carota
DCAR_010328 Daucus carota
DCAR_010330 Daucus carota
DCAR_010331 Daucus carota
DCAR_012214 Daucus carota
DCAR_012216 Daucus carota
DCAR_012222 Daucus carota
DCAR_012223 Daucus carota
DCAR_012224 Daucus carota
DCAR_012225 Daucus carota
DCAR_013416 Daucus carota
DCAR_018416 Daucus carota
Dinv08922 Davidia involucrata
Dinv11244 Davidia involucrata
Dinv21161 Davidia involucrata
Dinv21162 Davidia involucrata
Dinv22812 Davidia involucrata
Dinv31724 Davidia involucrata
Dinv32946 Davidia involucrata
Duzib093G0493 Durio zibethinus
Duzib128G0290 Durio zibethinus
Duzib133G1205 Durio zibethinus
Duzib138G0696 Durio zibethinus
Duzib150G0782 Durio zibethinus
Duzib168G1783 Durio zibethinus
Duzib170G0799 Durio zibethinus
ECA236G2531 Erigeron canadensis
ECA247G2715 Erigeron canadensis
ECA248G3330 Erigeron canadensis
EL10Ac3g06407 Beta vulgaris
EL10Ac7g16846 Beta vulgaris
Eucgr.J00526 Eucalyptus grandis
Eucgr.K03377 Eucalyptus grandis
FAN02G0071 Fragaria x ananassa
FAN05G2004 Fragaria x ananassa
FAN05G3885 Fragaria x ananassa
FAN11G0065 Fragaria x ananassa
FAN14G4181 Fragaria x ananassa
FAN15G0462 Fragaria x ananassa
FAN16G3341 Fragaria x ananassa
FAN20G1604 Fragaria x ananassa
FAN21G2749 Fragaria x ananassa
FAN24G2931 Fragaria x ananassa
FAN25G1416 Fragaria x ananassa
FAN27G1515 Fragaria x ananassa
FvH4_2g23740 Fragaria vesca
FvH4_3g25740 Fragaria vesca
FvH4_6g19530 Fragaria vesca
Glyma.02G148100 Glycine max
Glyma.03G152300 Glycine max
Glyma.03G198600 Glycine max
Glyma.10G025700 Glycine max
Glyma.10G075800 Glycine max
Glyma.11G181200 Glycine max
Glyma.12G186800 Glycine max
Glyma.13G314700 Glycine max
Glyma.14G223800 Glycine max
Glyma.19G154800 Glycine max
Glyma.19G196400 Glycine max
Gohir.A02G095300 Gossypium hirsutum
Gohir.A04G059700 Gossypium hirsutum
Gohir.A05G079300 Gossypium hirsutum
Gohir.A07G111100 Gossypium hirsutum
Gohir.A11G121900 Gossypium hirsutum
Gohir.D03G088200 Gossypium hirsutum
Gohir.D04G096500 Gossypium hirsutum
Gohir.D05G082200 Gossypium hirsutum
Gohir.D07G114900 Gossypium hirsutum
Gohir.D11G127100 Gossypium hirsutum
Gorai.001G123100 Gossypium raimondii
Gorai.003G073700 Gossypium raimondii
Gorai.007G135800 Gossypium raimondii
Gorai.009G083800 Gossypium raimondii
Gorai.009G399200 Gossypium raimondii
GSVIVG01011119001 Vitis vinifera
HanXRQChr01g0018041 Helianthus annuus
HanXRQChr02g0034551 Helianthus annuus
HanXRQChr04g0098931 Helianthus annuus
HanXRQChr04g0118771 Helianthus annuus
HanXRQChr04g0123241 Helianthus annuus
HanXRQChr10g0282771 Helianthus annuus
HanXRQChr15g0485071 Helianthus annuus
HanXRQChr15g0485081 Helianthus annuus
Haze_04727 Corylus avellana
Haze_09214 Corylus avellana
Haze_19656 Corylus avellana
Haze_23343 Corylus avellana
Hma1.2p1_0820F.1_g224090 Hydrangea macrophylla
HPP92_009882 Vanilla planifolia
HPP92_011809 Vanilla planifolia
Lalb_Chr01g0017941 Lupinus albus
Lalb_Chr02g0142801 Lupinus albus
Lalb_Chr02g0154771 Lupinus albus
Lalb_Chr03g0028271 Lupinus albus
Lalb_Chr24g0393471 Lupinus albus
Lalb_Chr24g0393481 Lupinus albus
Lj1A258G36 Lonicera japonica
Lj1A46T42 Lonicera japonica
Lj1g0010769 Lotus japonicus
Lj1P258T28 Lonicera japonica
Lj2A969G69 Lonicera japonica
Lj2C969G11 Lonicera japonica
Lj2C969T12 Lonicera japonica
Lj2C971G3 Lonicera japonica
Lj2C971T4 Lonicera japonica
Lj2P144T15 Lonicera japonica
Lj2P151T26 Lonicera japonica
Lj2P969T21 Lonicera japonica
Lj2P969T43 Lonicera japonica
Lj2P970T14 Lonicera japonica
Lj2P970T27 Lonicera japonica
Lj2P970T38 Lonicera japonica
Lj2P970T53 Lonicera japonica
Lj2P970T55 Lonicera japonica
Lj3g0009564 Lotus japonicus
Lj3g0017769 Lotus japonicus
Lj3g0024723 Lotus japonicus
Lj5g0015050 Lotus japonicus
Lj5g0021329 Lotus japonicus
Lj6P612T10 Lonicera japonica
Lsat_1_v5_gn_1_59920 Lactuca sativa
Lsat_1_v5_gn_1_85820 Lactuca sativa
Lsat_1_v5_gn_1_86140 Lactuca sativa
Lsat_1_v5_gn_1_86180 Lactuca sativa
Lsat_1_v5_gn_1_86240 Lactuca sativa
Lsat_1_v5_gn_3_82201 Lactuca sativa
Lsat_1_v5_gn_6_37100 Lactuca sativa
Lsat_1_v5_gn_8_56220 Lactuca sativa
Lsat_1_v5_gn_9_4061 Lactuca sativa
Lsat_1_v5_gn_9_71981 Lactuca sativa
Lsat_1_v5_gn_9_72200 Lactuca sativa
Lsat_1_v5_gn_9_72220 Lactuca sativa
Lsat_1_v5_gn_9_72840 Lactuca sativa
Lsat_1_v5_gn_9_73000 Lactuca sativa
Lsat_1_v5_gn_9_81961 Lactuca sativa
Manes.01G000434 Manihot esculenta
Manes.01G208700 Manihot esculenta
Manes.09G051600 Manihot esculenta
Manes.11G164500 Manihot esculenta
Mapoly0027s0014 Marchantia polymorpha
MBI01_g41238_MAGBIO Magnolia biondii
MBI01_g44955_MAGBIO Magnolia biondii
MBI04_g19008_MAGBIO Magnolia biondii
MBI17_g40298_MAGBIO Magnolia biondii
MD03G1150200 Malus domestica
MD03G1150400 Malus domestica
MD03G1267000 Malus domestica
MD11G1169600 Malus domestica
MD11G1169800 Malus domestica
MD11G1287400 Malus domestica
MD12G1031600 Malus domestica
MD14G1031900 Malus domestica
Medtr1g058490 Medicago truncatula
Medtr1g060460 Medicago truncatula
Medtr1g072360 Medicago truncatula
Medtr2g086920 Medicago truncatula
Medtr3g466280 Medicago truncatula
Medtr3g466300 Medicago truncatula
Medtr3g466330 Medicago truncatula
Medtr3g466350 Medicago truncatula
Medtr4g052460 Medicago truncatula
Medtr5g013660 Medicago truncatula
Medtr7g105320 Medicago truncatula
Medtr8g021080 Medicago truncatula
Medtr8g021090 Medicago truncatula
Medtr8g022730 Medicago truncatula
MELO3C009497.2 Cucumis melo
MELO3C014507.2 Cucumis melo
Migut.D02365 Erythranthe guttata
Migut.J00998 Erythranthe guttata
Migut.L01805 Erythranthe guttata
Migut.N02471 Erythranthe guttata
MSTRG.17698 Avicennia marina
MSTRG.18773 Avicennia marina
MSTRG.19279 Avicennia marina
MSTRG.21567 Avicennia marina
MSTRG.5867 Avicennia marina
Nitab4.5_0000731g0010 Nicotiana tabacum
Nitab4.5_0001028g0070 Nicotiana tabacum
Nitab4.5_0001933g0130 Nicotiana tabacum
Nitab4.5_0002036g0040 Nicotiana tabacum
Nitab4.5_0008177g0020 Nicotiana tabacum
Nn1g02184 Nelumbo nucifera
Nn2g14229 Nelumbo nucifera
Nn6g34804 Nelumbo nucifera
Oeu015964.1 Olea europaea
Oeu022879.1 Olea europaea
Oeu047417.1 Olea europaea
Oeu047834.1 Olea europaea
Oeu051601.1 Olea europaea
Oeu058570.1 Olea europaea
Os01g0685300 Oryza sativa ssp. japonica
Os02g0535901 Oryza sativa ssp. japonica
Os04g0414500 Oryza sativa ssp. japonica
Os11g0155100 Oryza sativa ssp. japonica
Os12g0156500 Oryza sativa ssp. japonica
Peaxi162Scf00013g00132 Petunia axillaris
Peaxi162Scf00069g00003 Petunia axillaris
Peaxi162Scf00096g00826 Petunia axillaris
Peaxi162Scf00224g00034 Petunia axillaris
Peaxi162Scf00338g00064 Petunia axillaris
Peaxi162Scf00345g01028 Petunia axillaris
PGR031G2343 Punica granatum
PGR044G0094 Punica granatum
PGR044G1888 Punica granatum
PGR102G1477 Punica granatum
PGR119G1239 Punica granatum
PGR142G3875 Punica granatum
PGSC0003DMG400026346 Solanum tuberosum
PGSC0003DMG400028160 Solanum tuberosum
Phvul.001G149900 Phaseolus vulgaris
Phvul.001G192900 Phaseolus vulgaris
Phvul.005G121900 Phaseolus vulgaris
Phvul.007G171100 Phaseolus vulgaris
Phvul.011G096300 Phaseolus vulgaris
Potri.001G452000 Populus trichocarpa
Potri.002G054500 Populus trichocarpa
Potri.004G199300 Populus trichocarpa
Potri.005G208200 Populus trichocarpa
Potri.006G208400 Populus trichocarpa
Potri.009G160700 Populus trichocarpa
Pp3c20_18520 Physcomitrium patens
Pp3c23_16130 Physcomitrium patens
Pp3c23_3650 Physcomitrium patens
Prupe.6G137300 Prunus persica
Prupe.7G100900 Prunus persica
Prupe.8G242700 Prunus persica
Psat3g031200 Pisum sativum
Psat5g260120 Pisum sativum
Psat6g060560 Pisum sativum
Psat7g186440 Pisum sativum
PSO170G3673 Papaver somniferum
PSO302G0139 Papaver somniferum
PSO339G4685 Papaver somniferum
PSO339G5488 Papaver somniferum
PSO384G0232 Papaver somniferum
PSO801G0103 Papaver somniferum
QL01p011805 Quercus lobata
QL02p027135 Quercus lobata
QL07p038097 Quercus lobata
QL08p000221 Quercus lobata
QL08p000251 Quercus lobata
QL12p022121 Quercus lobata
RcHm_v2.0_Chr3g0474871 Rosa chinensis
RcHm_v2.0_Chr5g0046101 Rosa chinensis
RcHm_v2.0_Chr6g0291231 Rosa chinensis
Rhsim01G0203100 Rhododendron simsii
Rhsim01G0203200 Rhododendron simsii
Rhsim01G0203300 Rhododendron simsii
Rhsim01G0203600 Rhododendron simsii
Rhsim01G0275400 Rhododendron simsii
Rhsim03G0069700 Rhododendron simsii
Rhsim13G0195000 Rhododendron simsii
Sabra02G0044300 Salix brachista
Sabra04G0134400 Salix brachista
Sabra05G0158400 Salix brachista
Sabra06G0160300 Salix brachista
Sabra09G0125700 Salix brachista
Sabra16G0305200 Salix brachista
SalBow3G2393 Salvia bowleyana
SalBow3G4144 Salvia bowleyana
SalBow4G1376 Salvia bowleyana
SalBow5G5688 Salvia bowleyana
SalBow6G5902 Salvia bowleyana
Sc02g0000450 Simmondsia chinensis
Sc19g0004440 Simmondsia chinensis
Sed0025213 Sechium edule
Sed0027957 Sechium edule
SEGI_09392 Sequoiadendron giganteum
SEGI_11383 Sequoiadendron giganteum
SEGI_16106 Sequoiadendron giganteum
SEGI_17994 Sequoiadendron giganteum
SEGI_21889 Sequoiadendron giganteum
SEGI_26855 Sequoiadendron giganteum
SEGI_27650 Sequoiadendron giganteum
SEGI_31567 Sequoiadendron giganteum
SEGI_31875 Sequoiadendron giganteum
SEGI_32242 Sequoiadendron giganteum
SEGI_32330 Sequoiadendron giganteum
SEGI_33640 Sequoiadendron giganteum
SEGI_40647 Sequoiadendron giganteum
SEGI_41552 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06693 Striga asiatica
SGA_v2.0_scaffold177G39440 Striga asiatica
SGA_v2.0_scaffold36G14254 Striga asiatica
SGA_v2.0_scaffold7G03997 Striga asiatica
SMO358G0574 Selaginella moellendorffii
Solyc09g065020.4 Solanum lycopersicum
Solyc10g083230.1 Solanum lycopersicum
Solyc11g068710.3 Solanum lycopersicum
Sopen09g026750 Solanum pennellii
Sopen10g032710 Solanum pennellii
Sopen11g027420 Solanum pennellii
Sp4g10120 Schrenkiella parvula
Sp4g18320 Schrenkiella parvula
Sp5g16910 Schrenkiella parvula
TAR362G0290 Trochodendron aralioides
TAR623G1074 Trochodendron aralioides
TAR633G1115 Trochodendron aralioides
TAR633G1388 Trochodendron aralioides
TAR636G0436 Trochodendron aralioides
TAR636G1412 Trochodendron aralioides
THA.LOC104799555 Tarenaya hassleriana
THA.LOC104800515 Tarenaya hassleriana
THA.LOC104817554 Tarenaya hassleriana
THA.LOC104820728 Tarenaya hassleriana
THA.LOC104826437 Tarenaya hassleriana
Thecc.01G281400 Theobroma cacao
Thecc.03G216100 Theobroma cacao
Thecc.05G096200 Theobroma cacao
Thecc.09G278000 Theobroma cacao
Thecc.09G278100 Theobroma cacao
Thhalv10002035m.g Eutrema salsugineum
Thhalv10016952m.g Eutrema salsugineum
TPR.G11608 Trifolium pratense
TPR.G15178 Trifolium pratense
TPR.G1585 Trifolium pratense
TPR.G16659 Trifolium pratense
TPR.G16662 Trifolium pratense
TPR.G16673 Trifolium pratense
TPR.G17223 Trifolium pratense
TPR.G23325 Trifolium pratense
TPR.G27006 Trifolium pratense
TPR.G32758 Trifolium pratense
TPR.G36506 Trifolium pratense
TPR.G39610 Trifolium pratense
TPR.G4529 Trifolium pratense
TWI09G0769 Tripterygium wilfordii
TWI23G1064 Tripterygium wilfordii
TWI39G0306 Tripterygium wilfordii
TWI39G0321 Tripterygium wilfordii
TWI39G0995 Tripterygium wilfordii
TWI53G0879 Tripterygium wilfordii
TWI63G0398 Tripterygium wilfordii
TWI79G0358 Tripterygium wilfordii
TWI79G1506 Tripterygium wilfordii
unitig_26.g10153 Utricularia gibba
unitig_26.g9258 Utricularia gibba
unitig_749.g13742 Utricularia gibba
unitig_8.g3660 Utricularia gibba
unitig_899.g15375 Utricularia gibba
VMungo0720G2940 Vigna mungo
VMungo1080G0702 Vigna mungo
VMungo1127G0911 Vigna mungo
VMungo1383G0438 Vigna mungo
VMungo1383G1863 Vigna mungo
Zm00001eb017340 Zea mays
Zm00001eb083710 Zea mays
Zm00001eb197220 Zea mays
Zm00001eb197260 Zea mays
Zm00001eb242900 Zea mays
Zm00001eb421990 Zea mays

User provided reference genes

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