Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00550 Brassica napus
A03p04640 Brassica napus
A06p32460 Brassica napus
A07p32450 Brassica napus
A07p32460 Brassica napus
A07p34200 Brassica napus
A09p03880 Brassica napus
Aa31LG11G12080 Aethionema arabicum
Aa31LG1G16440 Aethionema arabicum
Aa31LG4G12100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3512 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis
Actinidia15135 Actinidia chinensis
Actinidia15927 Actinidia chinensis
Actinidia15931 Actinidia chinensis
Actinidia16391 Actinidia chinensis
Actinidia16392 Actinidia chinensis
Actinidia16394 Actinidia chinensis
Actinidia22785 Actinidia chinensis
Actinidia24167 Actinidia chinensis
Actinidia24567 Actinidia chinensis
Actinidia30684 Actinidia chinensis
Ah.02g129170 Amaranthus hybridus
Ah.02g130500 Amaranthus hybridus
Ah.03g133760 Amaranthus hybridus
Ah.03g134350 Amaranthus hybridus
AL112U10040 Arabidopsis lyrata
AL2G26390 Arabidopsis lyrata
AL2G26400 Arabidopsis lyrata
AL6G21070 Arabidopsis lyrata
AL8G43210 Arabidopsis lyrata
Aqoxy1G02394 Aquilegia oxysepala
Aqoxy5G03558 Aquilegia oxysepala
Aqoxy5G03572 Aquilegia oxysepala
Aqoxy6G00643 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2M0S5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3J7CW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2BJ93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NJ8Y8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4N2LF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7B72I Arachis hypogaea
AT1G67690 Arabidopsis thaliana
AT1G67700 Arabidopsis thaliana
AT5G10540 Arabidopsis thaliana
AT5G65620 Arabidopsis thaliana
ATR0800G081 Amborella trichopoda
ATR0800G138 Amborella trichopoda
ATR0800G171 Amborella trichopoda
ATR0824G247 Amborella trichopoda
ATR0824G252 Amborella trichopoda
Atru.BG.281.p Acer truncatum
Atru.chr11.2216 Acer truncatum
Atru.chr11.2222 Acer truncatum
Atru.chr3.1158 Acer truncatum
Atru.chr3.1159 Acer truncatum
Atru.chr3.1174 Acer truncatum
Atru.chr3.1175 Acer truncatum
Atru.chr3.1176 Acer truncatum
AUR62005553 Chenopodium quinoa
AUR62005559 Chenopodium quinoa
AUR62005894 Chenopodium quinoa
AUR62005895 Chenopodium quinoa
AUR62024175 Chenopodium quinoa
AUR62024180 Chenopodium quinoa
AUR62032883 Chenopodium quinoa
BcaB01g05521 Brassica carinata
BcaB03g15175 Brassica carinata
BcaB03g15176 Brassica carinata
BcaB03g15369 Brassica carinata
BcaB05g21489 Brassica carinata
BcaC01g02851 Brassica carinata
BcaC01g03325 Brassica carinata
BcaC03g13317 Brassica carinata
BcaC08g46045 Brassica carinata
BcaC08g46186 Brassica carinata
BcaC08g46187 Brassica carinata
BolC2t06413H Brassica oleracea
BolC3t13045H Brassica oleracea
BolC3t17624H Brassica oleracea
BolC3t18277H Brassica oleracea
BolC6t37906H Brassica oleracea
BolC6t38945H Brassica oleracea
BolC6t38946H Brassica oleracea
BolC6t39193H Brassica oleracea
BraA01t00994Z Brassica rapa
BraA02t05038Z Brassica rapa
BraA03t09805Z Brassica rapa
BraA06t26170Z Brassica rapa
BraA07t30869Z Brassica rapa
BraA07t30870Z Brassica rapa
BraA07t31049Z Brassica rapa
C02p04530 Brassica napus
C03p05320 Brassica napus
C03p53640 Brassica napus
C03p60130 Brassica napus
C06p27360 Brassica napus
C06p38480 Brassica napus
C06p38530 Brassica napus
C06p42370 Brassica napus
CAN.G1061.30 Capsicum annuum
CAN.G1061.31 Capsicum annuum
CAN.G1061.32 Capsicum annuum
CAN.G1061.33 Capsicum annuum
CAN.G1061.34 Capsicum annuum
CAN.G1061.35 Capsicum annuum
CAN.G1220.1 Capsicum annuum
CAN.G1928.2 Capsicum annuum
CAN.G508.27 Capsicum annuum
CANSAT01G0179 Cannabis sativa
CANSAT21G0986 Cannabis sativa
CARHR060280 Cardamine hirsuta
CARHR060290 Cardamine hirsuta
CARHR202760 Cardamine hirsuta
CARHR217670 Cardamine hirsuta
CARHR279570 Cardamine hirsuta
Carub.0002s1412 Capsella rubella
Carub.0002s1413 Capsella rubella
Carub.0006s0902 Capsella rubella
Carub.0008s2649 Capsella rubella
Ca_13465_v3 Cicer arietinum L.
Ca_16492_v3 Cicer arietinum L.
Ca_16494_v3 Cicer arietinum L.
CBR_g28672 Chara braunii
CBR_g51495 Chara braunii
Cc00_g02850 Coffea canephora
Cc07_g07930 Coffea canephora
Cc11_g16390 Coffea canephora
Cc11_g16440 Coffea canephora
CDE02G1129 Ceratophyllum demersum
CDE02G1292 Ceratophyllum demersum
CDE04G1632 Ceratophyllum demersum
CDE04G3591 Ceratophyllum demersum
CDE09G0141 Ceratophyllum demersum
CDE09G0600 Ceratophyllum demersum
Cfa006834 Carpinus fangiana
Cfa009288 Carpinus fangiana
Cfa009301 Carpinus fangiana
Cfa009324 Carpinus fangiana
Cfa010111 Carpinus fangiana
Cfa021197 Carpinus fangiana
Cfa024759 Carpinus fangiana
Cfa025771 Carpinus fangiana
Ciclev10024919m.g Citrus clementina
Ciclev10027448m.g Citrus clementina
Ciclev10027606m.g Citrus clementina
Ciclev10032669m.g Citrus clementina
Ciclev10033657m.g Citrus clementina
CiPaw.05G174500 Carya illinoinensis
CiPaw.06G063200 Carya illinoinensis
CiPaw.07G043000 Carya illinoinensis
CiPaw.08G145000 Carya illinoinensis
ClCG07G009830 Citrullus lanatus
ClCG08G017380 Citrullus lanatus
ClCG08G017440 Citrullus lanatus
COL.COLO4_01330 Corchorus olitorius
COL.COLO4_02571 Corchorus olitorius
COL.COLO4_11684 Corchorus olitorius
COL.COLO4_23565 Corchorus olitorius
COL.COLO4_23601 Corchorus olitorius
Cpa.g.c30628.2 Carica papaya
Cpa.g.sc129.15 Carica papaya
Cpa.g.sc86.3 Carica papaya
Cre03.g146167 Chlamydomonas reinhardtii
Cre13.g572900 Chlamydomonas reinhardtii
CsaV3_2G025190 Cucumis sativus L.
CsaV3_2G025240 Cucumis sativus L.
CsaV3_4G008500 Cucumis sativus L.
CSS0003445 Camellia sinensis var. sinensis
CSS0009053 Camellia sinensis var. sinensis
CSS0022889 Camellia sinensis var. sinensis
CSS0031471 Camellia sinensis var. sinensis
CSS0036027 Camellia sinensis var. sinensis
CSS0037118 Camellia sinensis var. sinensis
CSS0040295 Camellia sinensis var. sinensis
DCAR_010514 Daucus carota
DCAR_021620 Daucus carota
DCAR_021641 Daucus carota
DCAR_025863 Daucus carota
DCAR_026485 Daucus carota
DCAR_032315 Daucus carota
Dinv11004 Davidia involucrata
Dinv11009 Davidia involucrata
Dinv27004 Davidia involucrata
Dinv29403 Davidia involucrata
Dinv40934 Davidia involucrata
Duzib147G1544 Durio zibethinus
Duzib248G0877 Durio zibethinus
Duzib251G0230 Durio zibethinus
ECA233G6138 Erigeron canadensis
ECA234G3132 Erigeron canadensis
ECA238G0162 Erigeron canadensis
ECA246G4544 Erigeron canadensis
EL10Ac6g13308 Beta vulgaris
EL10Ac6g13421 Beta vulgaris
EL10As2g23248 Beta vulgaris
Eucgr.B03454 Eucalyptus grandis
Eucgr.H04690 Eucalyptus grandis
Eucgr.I00594 Eucalyptus grandis
Eucgr.I00597 Eucalyptus grandis
Eucgr.L02517 Eucalyptus grandis
FAN07G1515 Fragaria x ananassa
FAN07G2070 Fragaria x ananassa
FAN12G0304 Fragaria x ananassa
FAN12G0763 Fragaria x ananassa
FAN17G0228 Fragaria x ananassa
FAN17G2678 Fragaria x ananassa
FAN19G0255 Fragaria x ananassa
FAN22G1346 Fragaria x ananassa
FAN22G1988 Fragaria x ananassa
FAN23G1646 Fragaria x ananassa
FAN26G1340 Fragaria x ananassa
FAN28G2550 Fragaria x ananassa
FvH4_1g19050 Fragaria vesca
FvH4_4g24570 Fragaria vesca
FvH4_4g24830 Fragaria vesca
Glyma.01G020300 Glycine max
Glyma.09G202100 Glycine max
Glyma.11G246700 Glycine max
Glyma.11G247067 Glycine max
Glyma.11G247133 Glycine max
Glyma.18G010200 Glycine max
Gohir.A03G068250 Gossypium hirsutum
Gohir.A03G129900 Gossypium hirsutum
Gohir.A04G137800 Gossypium hirsutum
Gohir.A11G208500 Gossypium hirsutum
Gohir.A12G082400 Gossypium hirsutum
Gohir.D02G153600 Gossypium hirsutum
Gohir.D03G094850 Gossypium hirsutum
Gohir.D04G181000 Gossypium hirsutum
Gohir.D11G214900 Gossypium hirsutum
Gohir.D12G080400 Gossypium hirsutum
Gorai.003G099000 Gossypium raimondii
Gorai.005G172700 Gossypium raimondii
Gorai.007G230700 Gossypium raimondii
Gorai.008G088600 Gossypium raimondii
Gorai.008G088700 Gossypium raimondii
Gorai.012G174200 Gossypium raimondii
GSVIVG01001667001 Vitis vinifera
GSVIVG01001670001 Vitis vinifera
GSVIVG01003850001 Vitis vinifera
GSVIVG01010306001 Vitis vinifera
GSVIVG01010319001 Vitis vinifera
GSVIVG01031425001 Vitis vinifera
HanXRQChr03g0075761 Helianthus annuus
HanXRQChr08g0207321 Helianthus annuus
HanXRQChr10g0288711 Helianthus annuus
HanXRQChr12g0355791 Helianthus annuus
HanXRQChr12g0372151 Helianthus annuus
HanXRQChr12g0375551 Helianthus annuus
HanXRQChr14g0447101 Helianthus annuus
HanXRQChr15g0468331 Helianthus annuus
Haze_03928 Corylus avellana
Haze_12318 Corylus avellana
Haze_12334 Corylus avellana
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla
Hma1.2p1_0080F.1_g042070 Hydrangea macrophylla
HPP92_004594 Vanilla planifolia
HPP92_008946 Vanilla planifolia
HPP92_025840 Vanilla planifolia
Hund06057 Selenicereus undatus
Hund14168 Selenicereus undatus
Hund25432 Selenicereus undatus
Lalb_Chr05g0216211 Lupinus albus
Lalb_Chr08g0230761 Lupinus albus
Lalb_Chr09g0325801 Lupinus albus
Lalb_Chr11g0075661 Lupinus albus
Lj2C429T16 Lonicera japonica
Lj2g0015774 Lotus japonicus
Lj4A176T36 Lonicera japonica
Lj6C819T3 Lonicera japonica
Lj6C820G6 Lonicera japonica
Lj6g0014976 Lotus japonicus
Lj6g0017703 Lotus japonicus
Lsat_1_v5_gn_1_130700 Lactuca sativa
Lsat_1_v5_gn_2_18321 Lactuca sativa
Lsat_1_v5_gn_2_26300 Lactuca sativa
Lsat_1_v5_gn_2_82080 Lactuca sativa
Lsat_1_v5_gn_2_82261 Lactuca sativa
Lsat_1_v5_gn_4_28681 Lactuca sativa
Lsat_1_v5_gn_4_28701 Lactuca sativa
Lsat_1_v5_gn_4_59680 Lactuca sativa
Lsat_1_v5_gn_5_93820 Lactuca sativa
Lsat_1_v5_gn_7_30280 Lactuca sativa
Lsat_1_v5_gn_7_58620 Lactuca sativa
Lsat_1_v5_gn_8_150960 Lactuca sativa
Lsat_1_v5_gn_8_151441 Lactuca sativa
Lsat_1_v5_gn_9_52981 Lactuca sativa
Manes.12G016550 Manihot esculenta
Manes.12G017100 Manihot esculenta
Manes.12G121600 Manihot esculenta
Manes.13G103984 Manihot esculenta
Mapoly0080s0066 Marchantia polymorpha
Mapoly0101s0039 Marchantia polymorpha
Mapoly0137s0031 Marchantia polymorpha
MBI06_g05241_MAGBIO Magnolia biondii
MBI11_g16648_MAGBIO Magnolia biondii
MBI16_g10449_MAGBIO Magnolia biondii
MBI16_g33083_MAGBIO Magnolia biondii
MBI16_g36493_MAGBIO Magnolia biondii
MCO01G115 Micromonas commoda
MCO02G036 Micromonas commoda
MD01G1044200 Malus domestica
MD02G1151800 Malus domestica
MD13G1108600 Malus domestica
MD13G1110200 Malus domestica
MD16G1110100 Malus domestica
MD16G1110200 Malus domestica
Medtr3g086000 Medicago truncatula
Medtr3g086040 Medicago truncatula
Medtr5g030940 Medicago truncatula
MELO3C010716.2 Cucumis melo
MELO3C010721.2 Cucumis melo
MELO3C016079.2 Cucumis melo
Migut.H00290 Erythranthe guttata
Migut.K00680 Erythranthe guttata
Migut.K00684 Erythranthe guttata
MSTRG.23623 Avicennia marina
MSTRG.532 Avicennia marina
MSTRG.7966 Avicennia marina
Nitab4.5_0000041g0390 Nicotiana tabacum
Nitab4.5_0000139g0030 Nicotiana tabacum
Nitab4.5_0000139g0060 Nicotiana tabacum
Nitab4.5_0000139g0070 Nicotiana tabacum
Nitab4.5_0000291g0100 Nicotiana tabacum
Nitab4.5_0001318g0090 Nicotiana tabacum
Nitab4.5_0002483g0020 Nicotiana tabacum
Nitab4.5_0007512g0010 Nicotiana tabacum
Nn1g05669 Nelumbo nucifera
Nn4g22445 Nelumbo nucifera
Nn5g29786 Nelumbo nucifera
Oeu007434.1 Olea europaea
Oeu007435.1 Olea europaea
Oeu009356.1 Olea europaea
Oeu020321.1 Olea europaea
Oeu026995.1 Olea europaea
Oeu036906.1 Olea europaea
Oeu041694.1 Olea europaea
Oeu044763.1 Olea europaea
Oeu050982.2 Olea europaea
Oeu054746.2 Olea europaea
Os01g0902200 Oryza sativa ssp. japonica
Os02g0600200 Oryza sativa ssp. japonica
Os02g0830100 Oryza sativa ssp. japonica
Peaxi162Scf00128g00729 Petunia axillaris
Peaxi162Scf00160g00921 Petunia axillaris
Peaxi162Scf00703g00111 Petunia axillaris
PGR031G2110 Punica granatum
PGR102G3374 Punica granatum
PGR119G0865 Punica granatum
PGSC0003DMG400017453 Solanum tuberosum
PGSC0003DMG400030613 Solanum tuberosum
Phvul.001G258300 Phaseolus vulgaris
Phvul.001G258500 Phaseolus vulgaris
Phvul.002G143600 Phaseolus vulgaris
Potri.007G004600 Populus trichocarpa
Potri.009G151300 Populus trichocarpa
Potri.010G053600 Populus trichocarpa
Potri.010G054466 Populus trichocarpa
Potri.014G010100 Populus trichocarpa
Pp3c14_9580 Physcomitrium patens
Pp3c18_20030 Physcomitrium patens
Pp3c19_17580 Physcomitrium patens
PRCOL_00000361 Prasinoderma coloniale
PRCOL_00007257 Prasinoderma coloniale
Prupe.1G234500 Prunus persica
Prupe.1G237600 Prunus persica
Prupe.6G167100 Prunus persica
Prupe.6G209200 Prunus persica
Psat2g133960 Pisum sativum
Psat5g093160 Pisum sativum
Psat5g093920 Pisum sativum
PSO017G2184 Papaver somniferum
PSO063G3228 Papaver somniferum
PSO063G7645 Papaver somniferum
PSO478G2230 Papaver somniferum
PSO782G0777 Papaver somniferum
PSO782G2509 Papaver somniferum
QL01p014133 Quercus lobata
QL03p055365 Quercus lobata
QL06p037353 Quercus lobata
QL11p013013 Quercus lobata
QL11p013027 Quercus lobata
RcHm_v2.0_Chr2g0110061 Rosa chinensis
RcHm_v2.0_Chr4g0431491 Rosa chinensis
RcHm_v2.0_Chr4g0431531 Rosa chinensis
RcHm_v2.0_Chr4g0431911 Rosa chinensis
RcHm_v2.0_Chr4g0444651 Rosa chinensis
RcHm_v2.0_Chr7g0233391 Rosa chinensis
RcHm_v2.0_Chr7g0233411 Rosa chinensis
RcHm_v2.0_Chr7g0233421 Rosa chinensis
Rhsim10G0079900 Rhododendron simsii
Rhsim10G0080000 Rhododendron simsii
Rhsim12G0036000 Rhododendron simsii
Rhsim12G0107100 Rhododendron simsii
Sabra07G0003300 Salix brachista
Sabra10G0017000 Salix brachista
Sabra10G0050400 Salix brachista
Sabra14G0001500 Salix brachista
Sabra14G0004300 Salix brachista
SalBow1G7379 Salvia bowleyana
SalBow2G0118 Salvia bowleyana
SalBow2G1645 Salvia bowleyana
SalBow3G1603 Salvia bowleyana
SalBow3G2076 Salvia bowleyana
SalBow3G4364 Salvia bowleyana
Sc04g0009800 Simmondsia chinensis
Sc11g0000750 Simmondsia chinensis
Sc12g0003840 Simmondsia chinensis
Sc16g0000720 Simmondsia chinensis
Sed0004969 Sechium edule
Sed0013965 Sechium edule
Sed0016167 Sechium edule
SEGI_03489 Sequoiadendron giganteum
SEGI_13204 Sequoiadendron giganteum
SEGI_20006 Sequoiadendron giganteum
SEGI_20923 Sequoiadendron giganteum
SEGI_22072 Sequoiadendron giganteum
SEGI_38583 Sequoiadendron giganteum
SEGI_38983 Sequoiadendron giganteum
SEGI_40444 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33140 Striga asiatica
SGA_v2.0_scaffold484G52361 Striga asiatica
SGA_v2.0_scaffold64G21891 Striga asiatica
SMO134G0101 Selaginella moellendorffii
SMO134G0121 Selaginella moellendorffii
SMO134G0218 Selaginella moellendorffii
SMO274G0011 Selaginella moellendorffii
SMO347G0350 Selaginella moellendorffii
SMO353G0212 Selaginella moellendorffii
SMO364G0683 Selaginella moellendorffii
SMO367G0665 Selaginella moellendorffii
Solyc02g091580.4 Solanum lycopersicum
Solyc05g014310.3 Solanum lycopersicum
Solyc09g014890.3 Solanum lycopersicum
Sopen02g036200 Solanum pennellii
Sopen05g009420 Solanum pennellii
Sopen09g007800 Solanum pennellii
Sp2g28710 Schrenkiella parvula
Sp5g22680 Schrenkiella parvula
Sp5g22690 Schrenkiella parvula
Sp6g32890 Schrenkiella parvula
TAR381G0455 Trochodendron aralioides
TAR622G1249 Trochodendron aralioides
TAR625G1042 Trochodendron aralioides
TAR629G1650 Trochodendron aralioides
TAR629G3532 Trochodendron aralioides
THA.LOC104798525 Tarenaya hassleriana
THA.LOC104825527 Tarenaya hassleriana
THA.LOC104825532 Tarenaya hassleriana
Thecc.01G084400 Theobroma cacao
Thecc.02G270700 Theobroma cacao
Thecc.02G272500 Theobroma cacao
Thhalv10003666m.g Eutrema salsugineum
Thhalv10012826m.g Eutrema salsugineum
Thhalv10018203m.g Eutrema salsugineum
Thhalv10019020m.g Eutrema salsugineum
TPR.G19314 Trifolium pratense
TPR.G33375 Trifolium pratense
TPR.G33396 Trifolium pratense
TPR.G33410 Trifolium pratense
TPR.G37069 Trifolium pratense
TWI36G0586 Tripterygium wilfordii
TWI53G1123 Tripterygium wilfordii
TWI75G0249 Tripterygium wilfordii
TWI77G0616 Tripterygium wilfordii
unitig_736.g22352 Utricularia gibba
unitig_747.g21137 Utricularia gibba
vmacro01092 Vaccinium macrocarpon
vmacro01093 Vaccinium macrocarpon
vmacro05523 Vaccinium macrocarpon
vmacro16147 Vaccinium macrocarpon
vmacro16148 Vaccinium macrocarpon
vmacro18038 Vaccinium macrocarpon
VMungo1215G0027 Vigna mungo
VMungo1383G0240 Vigna mungo
VMungo1383G2972 Vigna mungo
Zm00001eb144370 Zea mays
Zm00001eb246340 Zea mays
Zm00001eb259450 Zea mays

User provided reference genes

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