Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04700 Brassica napus
A02p26940 Brassica napus
A06p06410 Brassica napus
A06p07320 Brassica napus
A06p07350 Brassica napus
A08p34390 Brassica napus
A09p17630 Brassica napus
Aa31LG1G4360 Aethionema arabicum
Aa31LG1G5260 Aethionema arabicum
Aa31LG2G10070 Aethionema arabicum
Aa31LG2G10100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.279 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.281 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5380 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.75 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2545 Anthoceros agrestis
Actinidia00305 Actinidia chinensis
Actinidia01160 Actinidia chinensis
Actinidia13513 Actinidia chinensis
Actinidia15043 Actinidia chinensis
Actinidia19631 Actinidia chinensis
Actinidia29624 Actinidia chinensis
Ah.02g129890 Amaranthus hybridus
Ah.02g129900 Amaranthus hybridus
Ah.03g132660 Amaranthus hybridus
Ah.05g170840 Amaranthus hybridus
AL1G20280 Arabidopsis lyrata
AL1G21390 Arabidopsis lyrata
AL2G16440 Arabidopsis lyrata
AL7G17890 Arabidopsis lyrata
Aqoxy3G02988 Aquilegia oxysepala
Aqoxy5G04000 Aquilegia oxysepala
Aqoxy6G00877 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31UHS4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6V6D2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.72ZBT8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BK27YN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4Q9CX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UYF69H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAFC77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y95VYD Arachis hypogaea
AT1G09730 Arabidopsis thaliana
AT1G10570 Arabidopsis thaliana
AT1G60220 Arabidopsis thaliana
AT2G10625 Arabidopsis thaliana
AT4G33620 Arabidopsis thaliana
ATR0730G146 Amborella trichopoda
ATR0767G167 Amborella trichopoda
ATR0824G075 Amborella trichopoda
Atru.chr11.2015 Acer truncatum
Atru.chr13.1015 Acer truncatum
Atru.chr13.1016 Acer truncatum
Atru.chr6.1255 Acer truncatum
AUR62005372 Chenopodium quinoa
AUR62014034 Chenopodium quinoa
AUR62019044 Chenopodium quinoa
AUR62027883 Chenopodium quinoa
AUR62027884 Chenopodium quinoa
BcaB07g31205 Brassica carinata
BcaC02g09016 Brassica carinata
BcaC02g09020 Brassica carinata
BcaC04g22220 Brassica carinata
BcaC05g24868 Brassica carinata
BcaC05g24936 Brassica carinata
BcaC09g52173 Brassica carinata
BcaNung06983 Brassica carinata
BcaNung06984 Brassica carinata
BolC1t00491H Brassica oleracea
BolC4t25507H Brassica oleracea
BolC4t25531H Brassica oleracea
BolC5t29532H Brassica oleracea
BolC5t29630H Brassica oleracea
BolC5t29631H Brassica oleracea
BolC8t48942H Brassica oleracea
BolC9t55101H Brassica oleracea
BraA01t00453Z Brassica rapa
BraA02t07707Z Brassica rapa
BraA06t23852Z Brassica rapa
BraA06t23937Z Brassica rapa
BraA08t35351Z Brassica rapa
BraA09t37393Z Brassica rapa
C01p05090 Brassica napus
C04p39420 Brassica napus
C04p39640 Brassica napus
C05p07810 Brassica napus
C05p08830 Brassica napus
C08p13140 Brassica napus
C09p21960 Brassica napus
CAN.G376.11 Capsicum annuum
CAN.G523.11 Capsicum annuum
CAN.G60.9 Capsicum annuum
CAN.G61.18 Capsicum annuum
CANSAT01G2663 Cannabis sativa
CANSAT25G2063 Cannabis sativa
CANSAT54G0160 Cannabis sativa
CARHR009700 Cardamine hirsuta
CARHR010730 Cardamine hirsuta
CARHR052740 Cardamine hirsuta
CARHR056550 Cardamine hirsuta
CARHR221040 Cardamine hirsuta
CARHR241710 Cardamine hirsuta
Carub.0001s0907 Capsella rubella
Carub.0001s1001 Capsella rubella
Carub.0002s0503 Capsella rubella
Carub.0007s0682 Capsella rubella
Ca_00162_v3 Cicer arietinum L.
Ca_11800_v3 Cicer arietinum L.
Ca_16000_v3 Cicer arietinum L.
Ca_22729_v3 Cicer arietinum L.
Ca_30959_v3 Cicer arietinum L.
CBR_g17607 Chara braunii
CBR_g31692 Chara braunii
CBR_g324 Chara braunii
Cc00_g07670 Coffea canephora
Cc02_g20940 Coffea canephora
Cc11_g14630 Coffea canephora
CDE01G0247 Ceratophyllum demersum
CDE01G0387 Ceratophyllum demersum
CDE02G3610 Ceratophyllum demersum
CDE04G0851 Ceratophyllum demersum
CDE04G1081 Ceratophyllum demersum
CDE04G3345 Ceratophyllum demersum
CDE06G2008 Ceratophyllum demersum
Cfa009140 Carpinus fangiana
Cfa013790 Carpinus fangiana
Cfa013791 Carpinus fangiana
Ciclev10000201m.g Citrus clementina
Ciclev10029286m.g Citrus clementina
Ciclev10031081m.g Citrus clementina
CiPaw.05G150600 Carya illinoinensis
CiPaw.07G165900 Carya illinoinensis
CiPaw.08G055500 Carya illinoinensis
ClCG05G025290 Citrullus lanatus
ClCG08G011690 Citrullus lanatus
ClCG09G016070 Citrullus lanatus
COL.COLO4_32386 Corchorus olitorius
COL.COLO4_35242 Corchorus olitorius
COL.COLO4_36969 Corchorus olitorius
Cpa.g.sc21.12 Carica papaya
Cpa.g.sc21.13 Carica papaya
Cpa.g.sc42.3 Carica papaya
Cpa.g.sc42.5 Carica papaya
Cpa.g.sc69.20 Carica papaya
Cpa.g.sc69.25 Carica papaya
Cre06.g278197 Chlamydomonas reinhardtii
CsaV3_2G030290 Cucumis sativus L.
CsaV3_5G031600 Cucumis sativus L.
CsaV3_7G006900 Cucumis sativus L.
CSS0010703 Camellia sinensis var. sinensis
CSS0024382 Camellia sinensis var. sinensis
CSS0029667 Camellia sinensis var. sinensis
CSS0039925 Camellia sinensis var. sinensis
CSS0046510 Camellia sinensis var. sinensis
CSS0049204 Camellia sinensis var. sinensis
DCAR_007092 Daucus carota
DCAR_009562 Daucus carota
DCAR_009563 Daucus carota
DCAR_009566 Daucus carota
DCAR_012858 Daucus carota
DCAR_018007 Daucus carota
DCAR_021913 Daucus carota
DCAR_021914 Daucus carota
Dinv15305 Davidia involucrata
Dinv15996 Davidia involucrata
Dinv24863 Davidia involucrata
Dinv44858 Davidia involucrata
Duzib052G0393 Durio zibethinus
Duzib248G0868 Durio zibethinus
Duzib248G1000 Durio zibethinus
ECA232G4048 Erigeron canadensis
ECA232G4484 Erigeron canadensis
ECA233G2320 Erigeron canadensis
ECA234G2749 Erigeron canadensis
ECA246G0922 Erigeron canadensis
ECA246G3273 Erigeron canadensis
EL10Ac1g01055 Beta vulgaris
EL10Ac6g13669 Beta vulgaris
Eucgr.F02147 Eucalyptus grandis
Eucgr.H02612 Eucalyptus grandis
FAN04G0518 Fragaria x ananassa
FAN07G2035 Fragaria x ananassa
FAN08G0616 Fragaria x ananassa
FAN12G1507 Fragaria x ananassa
FAN13G3173 Fragaria x ananassa
FAN15G0696 Fragaria x ananassa
FAN17G1642 Fragaria x ananassa
FAN18G2083 Fragaria x ananassa
FAN20G2933 Fragaria x ananassa
FAN22G1387 Fragaria x ananassa
FAN24G0423 Fragaria x ananassa
FvH4_2g11700 Fragaria vesca
FvH4_3g25421 Fragaria vesca
FvH4_4g34560 Fragaria vesca
FvH4_5g35390 Fragaria vesca
Glyma.02G214000 Glycine max
Glyma.02G214100 Glycine max
Glyma.04G093800 Glycine max
Glyma.06G095600 Glycine max
Glyma.08G287700 Glycine max
Glyma.08G287800 Glycine max
Glyma.12G161850 Glycine max
Glyma.13G256800 Glycine max
Glyma.15G058100 Glycine max
Glyma.18G137700 Glycine max
Glyma.18G280300 Glycine max
Glyma.18G281500 Glycine max
Glyma.18G281600 Glycine max
Glyma.18G281700 Glycine max
Gohir.A01G132400 Gossypium hirsutum
Gohir.A03G177400 Gossypium hirsutum
Gohir.A04G115400 Gossypium hirsutum
Gohir.A04G135200 Gossypium hirsutum
Gohir.A05G219700 Gossypium hirsutum
Gohir.D01G117200 Gossypium hirsutum
Gohir.D02G201100 Gossypium hirsutum
Gohir.D04G156900 Gossypium hirsutum
Gohir.D04G178300 Gossypium hirsutum
Gohir.D05G222200 Gossypium hirsutum
Gorai.002G142500 Gossypium raimondii
Gorai.005G225700 Gossypium raimondii
Gorai.009G229600 Gossypium raimondii
Gorai.012G143900 Gossypium raimondii
Gorai.012G171400 Gossypium raimondii
GSVIVG01009172001 Vitis vinifera
GSVIVG01009173001 Vitis vinifera
GSVIVG01020234001 Vitis vinifera
GSVIVG01020235001 Vitis vinifera
HanXRQChr03g0063601 Helianthus annuus
HanXRQChr03g0065741 Helianthus annuus
HanXRQChr05g0157911 Helianthus annuus
HanXRQChr05g0163371 Helianthus annuus
HanXRQChr10g0289961 Helianthus annuus
HanXRQChr12g0368581 Helianthus annuus
HanXRQChr15g0484871 Helianthus annuus
HanXRQChr15g0490121 Helianthus annuus
Haze_12172 Corylus avellana
Haze_22451 Corylus avellana
Hma1.2p1_0010F.1_g006660 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058890 Hydrangea macrophylla
HPP92_006224 Vanilla planifolia
HPP92_008297 Vanilla planifolia
HPP92_008298 Vanilla planifolia
HPP92_020276 Vanilla planifolia
HPP92_024212 Vanilla planifolia
HPP92_027860 Vanilla planifolia
Hund16858 Selenicereus undatus
Hund25343 Selenicereus undatus
Hund27020 Selenicereus undatus
Hund27770 Selenicereus undatus
Hund27774 Selenicereus undatus
Lalb_Chr08g0242481 Lupinus albus
Lalb_Chr09g0335011 Lupinus albus
Lalb_Chr11g0065021 Lupinus albus
Lalb_Chr18g0060411 Lupinus albus
Lj1g0015973 Lotus japonicus
Lj4A718G40 Lonicera japonica
Lj4A737G51 Lonicera japonica
Lj4g0026951 Lotus japonicus
Lj5A230G42 Lonicera japonica
Lj5A230G43 Lonicera japonica
Lj5A230T38 Lonicera japonica
Lj6g0027662 Lotus japonicus
LjContig00408g0003702 Lotus japonicus
Lsat_1_v5_gn_1_8661 Lactuca sativa
Lsat_1_v5_gn_1_98460 Lactuca sativa
Lsat_1_v5_gn_2_62680 Lactuca sativa
Lsat_1_v5_gn_3_45040 Lactuca sativa
Lsat_1_v5_gn_3_48100 Lactuca sativa
Lsat_1_v5_gn_3_95181 Lactuca sativa
Lsat_1_v5_gn_4_183321 Lactuca sativa
Lsat_1_v5_gn_5_109800 Lactuca sativa
Lsat_1_v5_gn_6_105041 Lactuca sativa
Lsat_1_v5_gn_6_56301 Lactuca sativa
Lsat_1_v5_gn_7_76281 Lactuca sativa
Lsat_1_v5_gn_8_157321 Lactuca sativa
Lsat_1_v5_gn_9_75061 Lactuca sativa
Lsat_1_v5_gn_9_77261 Lactuca sativa
Lsat_1_v5_gn_9_81600 Lactuca sativa
Manes.02G145000 Manihot esculenta
Manes.07G038300 Manihot esculenta
Manes.10G098700 Manihot esculenta
Manes.12G029500 Manihot esculenta
Manes.13G030900 Manihot esculenta
Manes.18G059001 Manihot esculenta
Mapoly0025s0054 Marchantia polymorpha
MBI01_g24502_MAGBIO Magnolia biondii
MBI01_g42165_MAGBIO Magnolia biondii
MBI02_g05218_MAGBIO Magnolia biondii
MBI02_g18696_MAGBIO Magnolia biondii
MBI02_g18697_MAGBIO Magnolia biondii
MBI02_g18698_MAGBIO Magnolia biondii
MBI02_g25595_MAGBIO Magnolia biondii
MBI07_g34624_MAGBIO Magnolia biondii
MBI16_g27584_MAGBIO Magnolia biondii
MBI16_g36056_MAGBIO Magnolia biondii
MBI18_g28166_MAGBIO Magnolia biondii
MD08G1197400 Malus domestica
MD13G1091500 Malus domestica
MD15G1385000 Malus domestica
Medtr2g009580 Medicago truncatula
Medtr3g100390 Medicago truncatula
Medtr5g066230 Medicago truncatula
Medtr5g066240 Medicago truncatula
Medtr5g066530 Medicago truncatula
Medtr8g064370 Medicago truncatula
Medtr8g064470 Medicago truncatula
MELO3C011091.2 Cucumis melo
MELO3C012000.2 Cucumis melo
MELO3C018604.2 Cucumis melo
Migut.B00556 Erythranthe guttata
Migut.D01607 Erythranthe guttata
Migut.L01018 Erythranthe guttata
Migut.L01409 Erythranthe guttata
Migut.N02858 Erythranthe guttata
MSTRG.22177 Avicennia marina
MSTRG.24428 Avicennia marina
MSTRG.597 Avicennia marina
MSTRG.7894 Avicennia marina
Nitab4.5_0000034g0260 Nicotiana tabacum
Nitab4.5_0000034g0270 Nicotiana tabacum
Nitab4.5_0000113g0260 Nicotiana tabacum
Nitab4.5_0000159g0110 Nicotiana tabacum
Nitab4.5_0000531g0050 Nicotiana tabacum
Nitab4.5_0000706g0010 Nicotiana tabacum
Nitab4.5_0001026g0030 Nicotiana tabacum
Nitab4.5_0001026g0040 Nicotiana tabacum
Nitab4.5_0002579g0090 Nicotiana tabacum
Nitab4.5_0004636g0020 Nicotiana tabacum
Nn1g05565 Nelumbo nucifera
Nn4g22805 Nelumbo nucifera
Nn5g29887 Nelumbo nucifera
Oeu010529.1 Olea europaea
Oeu024827.1 Olea europaea
Oeu025935.3 Olea europaea
Oeu029680.1 Olea europaea
Oeu032041.1 Olea europaea
Oeu034571.1 Olea europaea
Oeu034572.1 Olea europaea
Oeu041818.1 Olea europaea
Oeu056395.2 Olea europaea
Os01g0738100 Oryza sativa ssp. japonica
Os05g0207900 Oryza sativa ssp. japonica
Os06g0487900 Oryza sativa ssp. japonica
Os12g0606900 Oryza sativa ssp. japonica
Peaxi162Scf00299g00715 Petunia axillaris
Peaxi162Scf00299g00720 Petunia axillaris
Peaxi162Scf00338g00116 Petunia axillaris
Peaxi162Scf00495g00216 Petunia axillaris
PGR031G1992 Punica granatum
PGR119G2170 Punica granatum
PGSC0003DMG400006817 Solanum tuberosum
PGSC0003DMG400023378 Solanum tuberosum
PGSC0003DMG400030989 Solanum tuberosum
PGSC0003DMG400033572 Solanum tuberosum
PGSC0003DMG401009214 Solanum tuberosum
PGSC0003DMG402009214 Solanum tuberosum
PGSC0003DMG402009344 Solanum tuberosum
Phvul.003G052200 Phaseolus vulgaris
Phvul.006G202100 Phaseolus vulgaris
Phvul.009G037600 Phaseolus vulgaris
Potri.002G105700 Populus trichocarpa
Potri.005G155600 Populus trichocarpa
Potri.007G115400 Populus trichocarpa
Potri.010G040600 Populus trichocarpa
Potri.017G044000 Populus trichocarpa
Pp3c15_7620 Physcomitrium patens
Pp3c17_2400 Physcomitrium patens
Pp3c25_3200 Physcomitrium patens
Pp3c25_7310 Physcomitrium patens
Pp3c5_19870 Physcomitrium patens
Pp3c9_4420 Physcomitrium patens
Pp3c9_9780 Physcomitrium patens
Pp3c9_9860 Physcomitrium patens
PRCOL_00000994 Prasinoderma coloniale
Prupe.1G254600 Prunus persica
Prupe.6G149300 Prunus persica
Prupe.8G069500 Prunus persica
Psat0s1668g0040 Pisum sativum
Psat1g095800 Pisum sativum
Psat1g215560 Pisum sativum
Psat2g064720 Pisum sativum
Psat4g125280 Pisum sativum
Psat5g046880 Pisum sativum
PSO063G2616 Papaver somniferum
PSO063G4088 Papaver somniferum
PSO170G5589 Papaver somniferum
PSO210G3238 Papaver somniferum
PSO541G4975 Papaver somniferum
PSO675G2554 Papaver somniferum
PSO832G2131 Papaver somniferum
QL01p018445 Quercus lobata
QL03p061415 Quercus lobata
QL09p017743 Quercus lobata
RcHm_v2.0_Chr3g0455541 Rosa chinensis
RcHm_v2.0_Chr4g0443941 Rosa chinensis
RcHm_v2.0_Chr6g0271021 Rosa chinensis
RcHm_v2.0_Chr7g0236781 Rosa chinensis
Rhsim07G0211800 Rhododendron simsii
Rhsim12G0121000 Rhododendron simsii
Sabra02G0083000 Salix brachista
Sabra07G0094200 Salix brachista
Sabra10G0026500 Salix brachista
Sabra17G0029900 Salix brachista
Sc01g0001150 Simmondsia chinensis
Sc11g0001210 Simmondsia chinensis
Sed0002698 Sechium edule
Sed0011755 Sechium edule
Sed0021630 Sechium edule
Sed0022127 Sechium edule
SEGI_02443 Sequoiadendron giganteum
SEGI_12549 Sequoiadendron giganteum
SEGI_13379 Sequoiadendron giganteum
SEGI_20117 Sequoiadendron giganteum
SEGI_23287 Sequoiadendron giganteum
SEGI_36476 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38250 Striga asiatica
SGA_v2.0_scaffold48G17832 Striga asiatica
SGA_v2.0_scaffold83G26374 Striga asiatica
SGA_v2.0_scaffold8G04226 Striga asiatica
SGA_v2.0_scaffold8G04227 Striga asiatica
SHI27221 Sapria himalayana
SMO347G0330 Selaginella moellendorffii
SMO361G0085 Selaginella moellendorffii
SMO367G0188 Selaginella moellendorffii
Solyc01g105820.3 Solanum lycopersicum
Solyc04g026200.3 Solanum lycopersicum
Solyc04g026220.4 Solanum lycopersicum
Solyc05g005630.4 Solanum lycopersicum
Solyc11g017040.2 Solanum lycopersicum
Solyc11g017060.2 Solanum lycopersicum
Sopen00g006460 Solanum pennellii
Sopen01g048280 Solanum pennellii
Sopen04g014190 Solanum pennellii
Sopen04g014200 Solanum pennellii
Sopen04g014280 Solanum pennellii
Sopen05g001630 Solanum pennellii
Sopen11g009030 Solanum pennellii
Sopen11g009050 Solanum pennellii
Sp1g08320 Schrenkiella parvula
Sp1g09220 Schrenkiella parvula
Sp2g04460 Schrenkiella parvula
Sp7g31340 Schrenkiella parvula
SpUn0106_0010 Schrenkiella parvula
TAR374G1183 Trochodendron aralioides
TAR381G0500 Trochodendron aralioides
TAR381G1516 Trochodendron aralioides
TAR625G0946 Trochodendron aralioides
THA.LOC104807180 Tarenaya hassleriana
THA.LOC104816798 Tarenaya hassleriana
THA.LOC104820191 Tarenaya hassleriana
THA.LOC104823662 Tarenaya hassleriana
Thecc.02G129400 Theobroma cacao
Thecc.02G248100 Theobroma cacao
Thecc.08G070600 Theobroma cacao
Thhalv10006645m.g Eutrema salsugineum
Thhalv10007260m.g Eutrema salsugineum
Thhalv10023376m.g Eutrema salsugineum
Thhalv10024447m.g Eutrema salsugineum
TPR.G12734 Trifolium pratense
TPR.G13778 Trifolium pratense
TPR.G32100 Trifolium pratense
TPR.G34572 Trifolium pratense
TPR.G36050 Trifolium pratense
TPR.G39555 Trifolium pratense
TPR.G6330 Trifolium pratense
TPR.G6333 Trifolium pratense
TPR.G9503 Trifolium pratense
TWI12G0821 Tripterygium wilfordii
TWI18G1467 Tripterygium wilfordii
TWI56G0043 Tripterygium wilfordii
TWI59G0076 Tripterygium wilfordii
unitig_26.g10341 Utricularia gibba
unitig_744.g24188 Utricularia gibba
unitig_8.g4849 Utricularia gibba
unitig_8.g4850 Utricularia gibba
vmacro04653 Vaccinium macrocarpon
vmacro04654 Vaccinium macrocarpon
vmacro16254 Vaccinium macrocarpon
VMungo0251G2116 Vigna mungo
VMungo0540G0648 Vigna mungo
VMungo1309G1057 Vigna mungo
Zm00001eb031350 Zea mays
Zm00001eb153850 Zea mays
Zm00001eb208510 Zea mays
Zm00001eb367170 Zea mays

User provided reference genes

Program Settings