Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16670 Brassica napus
A02p12130 Brassica napus
A03p55970 Brassica napus
A03p55980 Brassica napus
A06p09100 Brassica napus
A08p21200 Brassica napus
A09p13290 Brassica napus
A10p09620 Brassica napus
Aa31LG1G2110 Aethionema arabicum
Aa31LG2G460 Aethionema arabicum
Aa31LG3G8230 Aethionema arabicum
Aa31LG7G12360 Aethionema arabicum
Aa31LG7G12370 Aethionema arabicum
Actinidia02063 Actinidia chinensis
Actinidia03094 Actinidia chinensis
Actinidia05238 Actinidia chinensis
Actinidia13535 Actinidia chinensis
Actinidia13536 Actinidia chinensis
Actinidia14495 Actinidia chinensis
Actinidia27418 Actinidia chinensis
Actinidia32918 Actinidia chinensis
Ah.07g208550 Amaranthus hybridus
Ah.13g067630 Amaranthus hybridus
AL1G23890 Arabidopsis lyrata
AL2G12660 Arabidopsis lyrata
AL7G27720 Arabidopsis lyrata
AL7G27730 Arabidopsis lyrata
AL8G26070 Arabidopsis lyrata
AL8G26080 Arabidopsis lyrata
Aqoxy5G03945 Aquilegia oxysepala
Aqoxy5G03946 Aquilegia oxysepala
Aqoxy7G00518 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0RUU36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FH537Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6BHL8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KV09X6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KV6JR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VKT7IT Arachis hypogaea
AT1G12540 Arabidopsis thaliana
AT1G62975 Arabidopsis thaliana
AT4G25400 Arabidopsis thaliana
AT4G25410 Arabidopsis thaliana
AT5G51780 Arabidopsis thaliana
AT5G51790 Arabidopsis thaliana
ATR0661G119 Amborella trichopoda
ATR0661G187 Amborella trichopoda
ATR0661G238 Amborella trichopoda
ATR0661G325 Amborella trichopoda
ATR0763G102 Amborella trichopoda
ATR0782G047 Amborella trichopoda
ATR0782G065 Amborella trichopoda
ATR0782G228 Amborella trichopoda
Atru.chr1.583 Acer truncatum
Atru.chr1.585 Acer truncatum
Atru.chr1.586 Acer truncatum
Atru.chr1.588 Acer truncatum
AUR62007178 Chenopodium quinoa
AUR62010555 Chenopodium quinoa
AUR62016072 Chenopodium quinoa
AUR62016073 Chenopodium quinoa
AUR62017336 Chenopodium quinoa
AUR62021280 Chenopodium quinoa
AUR62021281 Chenopodium quinoa
AUR62021282 Chenopodium quinoa
BcaB03g12465 Brassica carinata
BcaB05g23987 Brassica carinata
BcaB05g23989 Brassica carinata
BcaB08g35525 Brassica carinata
BcaC03g14576 Brassica carinata
BcaC04g20636 Brassica carinata
BcaC04g22735 Brassica carinata
BcaC05g25134 Brassica carinata
BcaC05g25179 Brassica carinata
BcaC05g25180 Brassica carinata
BcaC05g25181 Brassica carinata
BcaC06g31924 Brassica carinata
BcaC06g32811 Brassica carinata
BcaC06g32812 Brassica carinata
BcaC06g32813 Brassica carinata
BcaC07g38186 Brassica carinata
BcaC09g50782 Brassica carinata
BcaNung03689 Brassica carinata
BcaNung03690 Brassica carinata
BolC1t02016H Brassica oleracea
BolC2t08153H Brassica oleracea
BolC5t29811H Brassica oleracea
BolC7t45916H Brassica oleracea
BolC7t45917H Brassica oleracea
BolC8t48607H Brassica oleracea
BolC9t54492H Brassica oleracea
BolC9t56998H Brassica oleracea
BraA01t01621Z Brassica rapa
BraA02t06277Z Brassica rapa
BraA03t14669Z Brassica rapa
BraA03t14670Z Brassica rapa
BraA06t24097Z Brassica rapa
BraA08t34070Z Brassica rapa
BraA09t36977Z Brassica rapa
BraA10t43043Z Brassica rapa
C01p20890 Brassica napus
C02p20230 Brassica napus
C05p10690 Brassica napus
C05p10700 Brassica napus
C07p54300 Brassica napus
C07p54310 Brassica napus
C09p15800 Brassica napus
C09p41210 Brassica napus
CAN.G1021.23 Capsicum annuum
CAN.G1101.1 Capsicum annuum
CAN.G1101.2 Capsicum annuum
CAN.G1283.1 Capsicum annuum
CAN.G28.4 Capsicum annuum
CAN.G339.46 Capsicum annuum
CAN.G375.44 Capsicum annuum
CAN.G375.45 Capsicum annuum
CANSAT21G0442 Cannabis sativa
CANSAT21G0785 Cannabis sativa
CANSAT21G1391 Cannabis sativa
CANSAT21G1549 Cannabis sativa
CARHR048680 Cardamine hirsuta
CARHR232810 Cardamine hirsuta
CARHR232820 Cardamine hirsuta
CARHR264660 Cardamine hirsuta
CARHR264670 Cardamine hirsuta
Carub.0001s1223 Capsella rubella
Carub.0002s0204 Capsella rubella
Carub.0007s1560 Capsella rubella
Carub.0007s1561 Capsella rubella
Carub.0008s1180 Capsella rubella
Carub.0008s1181 Capsella rubella
Cc02_g03660 Coffea canephora
Cc02_g03670 Coffea canephora
Cc02_g28190 Coffea canephora
Cc02_g28210 Coffea canephora
Cc08_g13690 Coffea canephora
Cc08_g13700 Coffea canephora
Cfa008251 Carpinus fangiana
Cfa008252 Carpinus fangiana
Cfa012063 Carpinus fangiana
Ciclev10006628m.g Citrus clementina
Ciclev10006639m.g Citrus clementina
Ciclev10006887m.g Citrus clementina
Ciclev10024422m.g Citrus clementina
CiPaw.03G099000 Carya illinoinensis
CiPaw.03G099100 Carya illinoinensis
CiPaw.03G099200 Carya illinoinensis
ClCG01G003330 Citrullus lanatus
ClCG01G003340 Citrullus lanatus
ClCG01G003350 Citrullus lanatus
ClCG01G003360 Citrullus lanatus
ClCG01G003370 Citrullus lanatus
ClCG05G007630 Citrullus lanatus
ClCG05G007640 Citrullus lanatus
COL.COLO4_14215 Corchorus olitorius
COL.COLO4_14216 Corchorus olitorius
COL.COLO4_14217 Corchorus olitorius
COL.COLO4_23806 Corchorus olitorius
COL.COLO4_28825 Corchorus olitorius
Cpa.g.sc4.179 Carica papaya
Cpa.g.sc4.181 Carica papaya
CsaV3_3G016560 Cucumis sativus L.
CsaV3_3G016570 Cucumis sativus L.
CsaV3_5G003410 Cucumis sativus L.
CsaV3_5G003420 Cucumis sativus L.
CsaV3_5G003430 Cucumis sativus L.
CSS0004016 Camellia sinensis var. sinensis
CSS0022137 Camellia sinensis var. sinensis
CSS0038169 Camellia sinensis var. sinensis
CSS0040348 Camellia sinensis var. sinensis
DCAR_018134 Daucus carota
DCAR_018135 Daucus carota
Dinv28514 Davidia involucrata
Dinv35129 Davidia involucrata
Dinv35130 Davidia involucrata
Dinv35131 Davidia involucrata
Dinv39039 Davidia involucrata
Duzib068G0300 Durio zibethinus
Duzib068G0562 Durio zibethinus
Duzib068G0864 Durio zibethinus
Duzib068G1182 Durio zibethinus
Duzib084G1059 Durio zibethinus
Duzib205G0219 Durio zibethinus
Duzib205G1762 Durio zibethinus
ECA232G1780 Erigeron canadensis
ECA238G1587 Erigeron canadensis
EL10Ac3g05755 Beta vulgaris
EL10Ac3g05756 Beta vulgaris
EL10Ac3g05757 Beta vulgaris
EL10Ac5g12253 Beta vulgaris
EL10Ac5g12680 Beta vulgaris
Eucgr.A02857 Eucalyptus grandis
Eucgr.D01948 Eucalyptus grandis
Eucgr.E00512 Eucalyptus grandis
Eucgr.F04119 Eucalyptus grandis
Eucgr.K00181 Eucalyptus grandis
FAN01G0658 Fragaria x ananassa
FAN01G1135 Fragaria x ananassa
FAN03G0198 Fragaria x ananassa
FAN03G2421 Fragaria x ananassa
FAN04G0053 Fragaria x ananassa
FAN06G0229 Fragaria x ananassa
FAN06G2255 Fragaria x ananassa
FAN06G2904 Fragaria x ananassa
FAN06G4443 Fragaria x ananassa
FAN10G1110 Fragaria x ananassa
FAN10G2210 Fragaria x ananassa
FAN10G2706 Fragaria x ananassa
FAN10G4332 Fragaria x ananassa
FAN13G0672 Fragaria x ananassa
FAN18G2099 Fragaria x ananassa
FvH4_5g01160 Fragaria vesca
FvH4_7g28590 Fragaria vesca
FvH4_7g28600 Fragaria vesca
FvH4_7g28610 Fragaria vesca
Glyma.09G149900 Glycine max
Glyma.09G150000 Glycine max
Glyma.10G241300 Glycine max
Glyma.10G241400 Glycine max
Glyma.16G201300 Glycine max
Glyma.16G201400 Glycine max
Glyma.20G152900 Glycine max
Glyma.20G153000 Glycine max
Gohir.A07G040100 Gossypium hirsutum
Gohir.A09G179000 Gossypium hirsutum
Gohir.A10G194700 Gossypium hirsutum
Gohir.A12G261900 Gossypium hirsutum
Gohir.A12G262900 Gossypium hirsutum
Gohir.D01G170901 Gossypium hirsutum
Gohir.D07G044200 Gossypium hirsutum
Gohir.D08G202100 Gossypium hirsutum
Gohir.D09G174500 Gossypium hirsutum
Gohir.D10G201800 Gossypium hirsutum
Gohir.D12G263366 Gossypium hirsutum
Gohir.D12G263400 Gossypium hirsutum
Gorai.001G047300 Gossypium raimondii
Gorai.002G157100 Gossypium raimondii
Gorai.006G196500 Gossypium raimondii
Gorai.008G085900 Gossypium raimondii
Gorai.008G282300 Gossypium raimondii
Gorai.008G282400 Gossypium raimondii
Gorai.010G053500 Gossypium raimondii
Gorai.011G226600 Gossypium raimondii
GSVIVG01018459001 Vitis vinifera
GSVIVG01018460001 Vitis vinifera
GSVIVG01018461001 Vitis vinifera
HanXRQChr01g0021141 Helianthus annuus
HanXRQChr02g0058551 Helianthus annuus
HanXRQChr07g0206721 Helianthus annuus
HanXRQChr14g0461841 Helianthus annuus
HanXRQChr14g0461851 Helianthus annuus
HanXRQChr15g0486101 Helianthus annuus
Haze_08993 Corylus avellana
Haze_13799 Corylus avellana
Haze_13800 Corylus avellana
Hma1.2p1_0099F.1_g048800 Hydrangea macrophylla
Hma1.2p1_0371F.1_g138320 Hydrangea macrophylla
Hma1.2p1_0386F.1_g141660 Hydrangea macrophylla
Hund04652 Selenicereus undatus
Hund04669 Selenicereus undatus
Hund04851 Selenicereus undatus
Hund11544 Selenicereus undatus
Hund11785 Selenicereus undatus
Lalb_Chr01g0008911 Lupinus albus
Lalb_Chr03g0032961 Lupinus albus
Lj1A987G38 Lonicera japonica
Lj2g0009723 Lotus japonicus
Lj2g0026159 Lotus japonicus
Lj5g0006047 Lotus japonicus
Lj5g0013853 Lotus japonicus
Lj5g0025775 Lotus japonicus
Lj8A243G42 Lonicera japonica
Lsat_1_v5_gn_9_53541 Lactuca sativa
Manes.06G140500 Manihot esculenta
Manes.06G140600 Manihot esculenta
Manes.06G140700 Manihot esculenta
Manes.14G031500 Manihot esculenta
Manes.14G031600 Manihot esculenta
MBI04_g21534_MAGBIO Magnolia biondii
MBI04_g21537_MAGBIO Magnolia biondii
MBI04_g22602_MAGBIO Magnolia biondii
MBI11_g37707_MAGBIO Magnolia biondii
MBI11_g37708_MAGBIO Magnolia biondii
MBI11_g40186_MAGBIO Magnolia biondii
MBI11_g40187_MAGBIO Magnolia biondii
MD00G1002600 Malus domestica
MD01G1191600 Malus domestica
MD01G1191700 Malus domestica
MD12G1112400 Malus domestica
Medtr0007s0330 Medicago truncatula
Medtr0007s0380 Medicago truncatula
Medtr1g102370 Medicago truncatula
Medtr1g102380 Medicago truncatula
MELO3C005610.2 Cucumis melo
MELO3C005611.2 Cucumis melo
MELO3C005612.2 Cucumis melo
MELO3C006854.2 Cucumis melo
MELO3C031789.2 Cucumis melo
MELO3C034003.2 Cucumis melo
Migut.F00404 Erythranthe guttata
Migut.F00405 Erythranthe guttata
Migut.F01201 Erythranthe guttata
Migut.H00770 Erythranthe guttata
MSTRG.27152 Avicennia marina
MSTRG.27154 Avicennia marina
MSTRG.27155 Avicennia marina
MSTRG.8783 Avicennia marina
Nitab4.5_0000072g0020 Nicotiana tabacum
Nitab4.5_0000347g0080 Nicotiana tabacum
Nitab4.5_0000347g0090 Nicotiana tabacum
Nitab4.5_0000971g0040 Nicotiana tabacum
Nitab4.5_0001306g0010 Nicotiana tabacum
Nitab4.5_0001341g0050 Nicotiana tabacum
Nitab4.5_0001757g0020 Nicotiana tabacum
Nitab4.5_0001757g0030 Nicotiana tabacum
Nitab4.5_0002060g0020 Nicotiana tabacum
Nitab4.5_0006298g0020 Nicotiana tabacum
Nitab4.5_0006298g0060 Nicotiana tabacum
Nitab4.5_0007466g0010 Nicotiana tabacum
Nitab4.5_0009640g0010 Nicotiana tabacum
Oeu022525.1 Olea europaea
Oeu022529.1 Olea europaea
Oeu022531.1 Olea europaea
Oeu023045.1 Olea europaea
Oeu030149.1 Olea europaea
Oeu036910.1 Olea europaea
Oeu039230.1 Olea europaea
Oeu039231.1 Olea europaea
Oeu039232.1 Olea europaea
Oeu042416.1 Olea europaea
Oeu042593.1 Olea europaea
Oeu056156.1 Olea europaea
Oeu056161.1 Olea europaea
Oeu056162.1 Olea europaea
Oeu056169.1 Olea europaea
Oeu056171.1 Olea europaea
Oeu056174.1 Olea europaea
Oeu056176.1 Olea europaea
Peaxi162Scf00000g00723 Petunia axillaris
Peaxi162Scf00111g01327 Petunia axillaris
Peaxi162Scf00156g00023 Petunia axillaris
Peaxi162Scf00156g00213 Petunia axillaris
Peaxi162Scf00192g00715 Petunia axillaris
Peaxi162Scf01178g00113 Petunia axillaris
Peaxi162Scf01178g00119 Petunia axillaris
PGR031G1448 Punica granatum
PGR031G2884 Punica granatum
PGR042G1285 Punica granatum
PGR042G1754 Punica granatum
PGR102G2034 Punica granatum
PGR102G2415 Punica granatum
PGSC0003DMG400007092 Solanum tuberosum
PGSC0003DMG400007559 Solanum tuberosum
PGSC0003DMG400010526 Solanum tuberosum
PGSC0003DMG400027959 Solanum tuberosum
PGSC0003DMG400040835 Solanum tuberosum
Phvul.004G124200 Phaseolus vulgaris
Phvul.004G124300 Phaseolus vulgaris
Phvul.007G064300 Phaseolus vulgaris
Phvul.007G064400 Phaseolus vulgaris
Potri.001G113400 Populus trichocarpa
Potri.012G132000 Populus trichocarpa
Potri.012G132100 Populus trichocarpa
Potri.015G134300 Populus trichocarpa
Potri.015G134400 Populus trichocarpa
Prupe.2G285900 Prunus persica
Prupe.2G286000 Prunus persica
Prupe.2G286100 Prunus persica
Prupe.5G086600 Prunus persica
Psat1g107040 Pisum sativum
Psat6g202400 Pisum sativum
Psat6g202840 Pisum sativum
PSO478G1422 Papaver somniferum
PSO478G2013 Papaver somniferum
PSO478G3251 Papaver somniferum
PSO782G0335 Papaver somniferum
PSO782G4971 Papaver somniferum
QL12p038958 Quercus lobata
QL12p038971 Quercus lobata
QL12p038982 Quercus lobata
QL12p038997 Quercus lobata
QL12p039006 Quercus lobata
QL12p039031 Quercus lobata
RcHm_v2.0_Chr1g0368211 Rosa chinensis
RcHm_v2.0_Chr1g0376001 Rosa chinensis
RcHm_v2.0_Chr1g0376011 Rosa chinensis
RcHm_v2.0_Chr1g0376061 Rosa chinensis
RcHm_v2.0_Chr7g0199961 Rosa chinensis
Rhsim03G0173700 Rhododendron simsii
Rhsim03G0173800 Rhododendron simsii
Rhsim03G0173900 Rhododendron simsii
Rhsim03G0174000 Rhododendron simsii
Rhsim07G0096700 Rhododendron simsii
Rhsim09G0194900 Rhododendron simsii
Sabra12G0099300 Salix brachista
Sabra12G0099400 Salix brachista
Sabra15G0146400 Salix brachista
Sabra15G0146500 Salix brachista
SalBow4G0696 Salvia bowleyana
SalBow4G0836 Salvia bowleyana
SalBow4G1086 Salvia bowleyana
SalBow4G1185 Salvia bowleyana
SalBow4G1216 Salvia bowleyana
SalBow4G1523 Salvia bowleyana
SalBow4G1602 Salvia bowleyana
SalBow4G1823 Salvia bowleyana
SalBow4G2616 Salvia bowleyana
SalBow4G2927 Salvia bowleyana
SalBow4G3159 Salvia bowleyana
SalBow4G3286 Salvia bowleyana
Sc13g0008180 Simmondsia chinensis
Sc19g0001770 Simmondsia chinensis
Sc19g0001780 Simmondsia chinensis
Sed0001541 Sechium edule
Sed0002566 Sechium edule
Sed0006628 Sechium edule
Sed0008464 Sechium edule
Sed0011491 Sechium edule
Sed0014264 Sechium edule
Sed0018083 Sechium edule
SEGI_01180 Sequoiadendron giganteum
SEGI_07629 Sequoiadendron giganteum
SEGI_10316 Sequoiadendron giganteum
SEGI_11821 Sequoiadendron giganteum
SEGI_13782 Sequoiadendron giganteum
SEGI_14300 Sequoiadendron giganteum
SEGI_21067 Sequoiadendron giganteum
SEGI_25056 Sequoiadendron giganteum
SEGI_25562 Sequoiadendron giganteum
SEGI_27151 Sequoiadendron giganteum
SEGI_29341 Sequoiadendron giganteum
SEGI_32203 Sequoiadendron giganteum
SEGI_32777 Sequoiadendron giganteum
SEGI_34052 Sequoiadendron giganteum
SEGI_34437 Sequoiadendron giganteum
SEGI_34801 Sequoiadendron giganteum
SEGI_41365 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01099 Striga asiatica
SGA_v2.0_scaffold2G01102 Striga asiatica
Solyc03g006910.3 Solanum lycopersicum
Solyc04g056535.1 Solanum lycopersicum
Solyc06g035490.3 Solanum lycopersicum
Solyc07g062200.2 Solanum lycopersicum
Solyc09g074805.1 Solanum lycopersicum
Sopen03g002910 Solanum pennellii
Sopen04g025470 Solanum pennellii
Sopen06g011230 Solanum pennellii
Sopen07g030480 Solanum pennellii
Sopen09g029650 Solanum pennellii
Sp1g11120 Schrenkiella parvula
Sp2g01630 Schrenkiella parvula
Sp6g14000 Schrenkiella parvula
Sp6g14020 Schrenkiella parvula
Sp6g14030 Schrenkiella parvula
Sp7g23420 Schrenkiella parvula
Sp7g23430 Schrenkiella parvula
TAR629G0867 Trochodendron aralioides
TAR636G2369 Trochodendron aralioides
THA.LOC104811499 Tarenaya hassleriana
THA.LOC104811500 Tarenaya hassleriana
THA.LOC104818269 Tarenaya hassleriana
THA.LOC104823567 Tarenaya hassleriana
Thecc.03G165700 Theobroma cacao
Thecc.03G165800 Theobroma cacao
Thecc.03G165900 Theobroma cacao
Thecc.03G267000 Theobroma cacao
Thecc.03G267100 Theobroma cacao
Thhalv10009922m.g Eutrema salsugineum
Thhalv10014694m.g Eutrema salsugineum
Thhalv10015297m.g Eutrema salsugineum
Thhalv10023637m.g Eutrema salsugineum
Thhalv10026341m.g Eutrema salsugineum
Thhalv10027549m.g Eutrema salsugineum
TPR.G17394 Trifolium pratense
TPR.G17418 Trifolium pratense
TPR.G26585 Trifolium pratense
TWI14G0763 Tripterygium wilfordii
TWI81G0370 Tripterygium wilfordii
TWI81G0610 Tripterygium wilfordii
unitig_37.g12509 Utricularia gibba
unitig_748.g7095 Utricularia gibba
vmacro06751 Vaccinium macrocarpon
vmacro06752 Vaccinium macrocarpon
vmacro09873 Vaccinium macrocarpon
vmacro09874 Vaccinium macrocarpon
vmacro14017 Vaccinium macrocarpon
vmacro22544 Vaccinium macrocarpon
vmacro22545 Vaccinium macrocarpon
vmacro22546 Vaccinium macrocarpon
vmacro23175 Vaccinium macrocarpon
vmacro23176 Vaccinium macrocarpon
vmacro23177 Vaccinium macrocarpon
VMungo0464G1288 Vigna mungo
VMungo0464G1833 Vigna mungo
VMungo0720G0922 Vigna mungo
VMungo0720G2037 Vigna mungo

User provided reference genes

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