Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14920 Brassica napus
A07p33740 Brassica napus
A07p34760 Brassica napus
A08p33960 Brassica napus
A09p65040 Brassica napus
Aa31LG1G4470 Aethionema arabicum
Aa31LG2G3420 Aethionema arabicum
Actinidia08184 Actinidia chinensis
Actinidia14908 Actinidia chinensis
Actinidia15584 Actinidia chinensis
Actinidia16671 Actinidia chinensis
Actinidia25834 Actinidia chinensis
Ah.02g127640 Amaranthus hybridus
Ah.11g046240 Amaranthus hybridus
AL1G21280 Arabidopsis lyrata
AL2G25350 Arabidopsis lyrata
AL2G27210 Arabidopsis lyrata
Aqoxy2G02813 Aquilegia oxysepala
Aqoxy3G00245 Aquilegia oxysepala
Aqoxy3G03102 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9RWZ5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BPB7X4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GUG7VU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5B2UF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JIT9FN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MHX50Y Arachis hypogaea
AT1G10480 Arabidopsis thaliana
AT1G67030 Arabidopsis thaliana
AT1G68360 Arabidopsis thaliana
ATR0706G024 Amborella trichopoda
ATR1125G014 Amborella trichopoda
ATR1149G134 Amborella trichopoda
Atru.chr1.1660 Acer truncatum
Atru.chr11.1949 Acer truncatum
Atru.chr5.1055 Acer truncatum
AUR62002642 Chenopodium quinoa
AUR62026560 Chenopodium quinoa
AUR62032101 Chenopodium quinoa
AUR62037310 Chenopodium quinoa
AUR62037860 Chenopodium quinoa
AUR62039422 Chenopodium quinoa
BcaB03g15413 Brassica carinata
BcaB03g15815 Brassica carinata
BcaB03g15906 Brassica carinata
BcaB05g24373 Brassica carinata
BcaB08g37354 Brassica carinata
BcaC03g14939 Brassica carinata
BcaC03g14940 Brassica carinata
BcaC07g38604 Brassica carinata
BcaC07g41820 Brassica carinata
BcaNung06252 Brassica carinata
BolC2t08550H Brassica oleracea
BolC6t39121H Brassica oleracea
BolC6t39261H Brassica oleracea
BolC8t49007H Brassica oleracea
BolC8t52421H Brassica oleracea
BraA02t06558Z Brassica rapa
BraA07t31001Z Brassica rapa
BraA07t31094Z Brassica rapa
BraA08t35309Z Brassica rapa
BraA09t41847Z Brassica rapa
C02p24450 Brassica napus
C06p41650 Brassica napus
C06p43190 Brassica napus
C08p13710 Brassica napus
C08p48840 Brassica napus
CAN.G14.1 Capsicum annuum
CAN.G159.18 Capsicum annuum
CAN.G610.60 Capsicum annuum
CAN.G610.61 Capsicum annuum
CAN.G853.10 Capsicum annuum
CANSAT01G2668 Cannabis sativa
CANSAT78G1213 Cannabis sativa
CANSAT78G1994 Cannabis sativa
CANSAT80G1583 Cannabis sativa
CARHR010620 Cardamine hirsuta
CARHR059420 Cardamine hirsuta
CARHR061080 Cardamine hirsuta
Carub.0001s0991 Capsella rubella
Carub.0002s1329 Capsella rubella
Carub.0002s1486 Capsella rubella
Ca_08081_v3 Cicer arietinum L.
Ca_11147_v3 Cicer arietinum L.
Ca_26574_v3 Cicer arietinum L.
Cc00_g15160 Coffea canephora
Cc11_g09880 Coffea canephora
Cc11_g14160 Coffea canephora
CDE06G0381 Ceratophyllum demersum
Cfa005845 Carpinus fangiana
Cfa007913 Carpinus fangiana
Ciclev10013754m.g Citrus clementina
Ciclev10016426m.g Citrus clementina
Ciclev10022452m.g Citrus clementina
Ciclev10032466m.g Citrus clementina
CiPaw.01G142100 Carya illinoinensis
CiPaw.02G076900 Carya illinoinensis
CiPaw.03G062900 Carya illinoinensis
CiPaw.04G043200 Carya illinoinensis
CiPaw.05G145900 Carya illinoinensis
CiPaw.06G018300 Carya illinoinensis
CiPaw.06G075500 Carya illinoinensis
CiPaw.08G091900 Carya illinoinensis
ClCG01G005820 Citrullus lanatus
ClCG05G022560 Citrullus lanatus
ClCG05G024980 Citrullus lanatus
ClCG06G004780 Citrullus lanatus
ClCG09G005290 Citrullus lanatus
ClCG11G007850 Citrullus lanatus
COL.COLO4_04323 Corchorus olitorius
COL.COLO4_09350 Corchorus olitorius
COL.COLO4_23269 Corchorus olitorius
COL.COLO4_34671 Corchorus olitorius
COL.COLO4_37888 Corchorus olitorius
COL.COLO4_38493 Corchorus olitorius
Cpa.g.sc18.1 Carica papaya
Cpa.g.sc5.339 Carica papaya
Cpa.g.sc65.48 Carica papaya
Cpa.g.sc9.98 Carica papaya
CsaV3_2G033740 Cucumis sativus L.
CsaV3_5G025350 Cucumis sativus L.
CsaV3_5G028870 Cucumis sativus L.
CsaV3_5G031910 Cucumis sativus L.
CsaV3_5G034460 Cucumis sativus L.
CsaV3_6G022570 Cucumis sativus L.
CsaV3_7G029780 Cucumis sativus L.
CSS0002480 Camellia sinensis var. sinensis
CSS0009568 Camellia sinensis var. sinensis
CSS0016388 Camellia sinensis var. sinensis
CSS0019313 Camellia sinensis var. sinensis
CSS0020753 Camellia sinensis var. sinensis
CSS0042001 Camellia sinensis var. sinensis
CSS0048728 Camellia sinensis var. sinensis
DCAR_000151 Daucus carota
DCAR_002870 Daucus carota
DCAR_007252 Daucus carota
DCAR_023331 Daucus carota
DCAR_023643 Daucus carota
DCAR_024520 Daucus carota
DCAR_024521 Daucus carota
DCAR_026559 Daucus carota
DCAR_026741 Daucus carota
DCAR_027019 Daucus carota
DCAR_030172 Daucus carota
Dinv02073 Davidia involucrata
Dinv21056 Davidia involucrata
Dinv24910 Davidia involucrata
Dinv31617 Davidia involucrata
Dinv35024 Davidia involucrata
Dinv44319 Davidia involucrata
Duzib068G0272 Durio zibethinus
Duzib138G0854 Durio zibethinus
Duzib138G1206 Durio zibethinus
Duzib151G0151 Durio zibethinus
Duzib211G0083 Durio zibethinus
Duzib211G0582 Durio zibethinus
Duzib212G0239 Durio zibethinus
Duzib248G0406 Durio zibethinus
Duzib248G0418 Durio zibethinus
Duzib251G0229 Durio zibethinus
Duzib251G0738 Durio zibethinus
Duzib268G1574 Durio zibethinus
ECA233G2451 Erigeron canadensis
ECA233G3732 Erigeron canadensis
ECA234G2753 Erigeron canadensis
EL10Ac6g13753 Beta vulgaris
EL10Ac6g14353 Beta vulgaris
Eucgr.B02564 Eucalyptus grandis
Eucgr.B03001 Eucalyptus grandis
Eucgr.B03372 Eucalyptus grandis
Eucgr.F02505 Eucalyptus grandis
FAN07G0180 Fragaria x ananassa
FAN07G0319 Fragaria x ananassa
FAN12G1641 Fragaria x ananassa
FAN12G3428 Fragaria x ananassa
FAN12G3529 Fragaria x ananassa
FAN12G3622 Fragaria x ananassa
FAN17G0792 Fragaria x ananassa
FAN17G2270 Fragaria x ananassa
FAN22G0402 Fragaria x ananassa
FAN22G1816 Fragaria x ananassa
FvH4_4g19283 Fragaria vesca
FvH4_4g27020 Fragaria vesca
FvH4_4g35130 Fragaria vesca
Glyma.01G036600 Glycine max
Glyma.02G029000 Glycine max
Glyma.02G029100 Glycine max
Glyma.02G029400 Glycine max
Glyma.03G217900 Glycine max
Glyma.08G366900 Glycine max
Glyma.10G272300 Glycine max
Glyma.17G031400 Glycine max
Glyma.18G295500 Glycine max
Glyma.19G214600 Glycine max
Glyma.20G117800 Glycine max
Gohir.A03G143001 Gossypium hirsutum
Gohir.A03G147900 Gossypium hirsutum
Gohir.A07G207400 Gossypium hirsutum
Gohir.A08G041100 Gossypium hirsutum
Gohir.A09G064200 Gossypium hirsutum
Gohir.A10G168500 Gossypium hirsutum
Gohir.A11G111400 Gossypium hirsutum
Gohir.A12G142100 Gossypium hirsutum
Gohir.D02G166300 Gossypium hirsutum
Gohir.D02G171100 Gossypium hirsutum
Gohir.D07G131400 Gossypium hirsutum
Gohir.D07G213400 Gossypium hirsutum
Gohir.D08G051200 Gossypium hirsutum
Gohir.D09G063100 Gossypium hirsutum
Gohir.D10G174700 Gossypium hirsutum
Gohir.D11G116700 Gossypium hirsutum
Gohir.D12G147000 Gossypium hirsutum
Gorai.001G142500 Gossypium raimondii
Gorai.001G241300 Gossypium raimondii
Gorai.004G050900 Gossypium raimondii
Gorai.005G186400 Gossypium raimondii
Gorai.005G192400 Gossypium raimondii
Gorai.006G078000 Gossypium raimondii
Gorai.007G124800 Gossypium raimondii
Gorai.008G158200 Gossypium raimondii
Gorai.011G195500 Gossypium raimondii
GSVIVG01011868001 Vitis vinifera
GSVIVG01020155001 Vitis vinifera
GSVIVG01031007001 Vitis vinifera
HanXRQChr03g0087231 Helianthus annuus
HanXRQChr08g0209051 Helianthus annuus
HanXRQChr12g0371271 Helianthus annuus
HanXRQChr15g0476601 Helianthus annuus
HanXRQChr15g0477591 Helianthus annuus
HanXRQChr17g0551971 Helianthus annuus
HanXRQChr17g0558931 Helianthus annuus
HanXRQChr17g0567441 Helianthus annuus
Haze_00624 Corylus avellana
Haze_01086 Corylus avellana
Haze_05004 Corylus avellana
Haze_12128 Corylus avellana
Hma1.2p1_0002F.1_g002780 Hydrangea macrophylla
Hma1.2p1_0160F.1_g070570 Hydrangea macrophylla
Hma1.2p1_0212F.1_g090130 Hydrangea macrophylla
Hma1.2p1_1049F.1_g251840 Hydrangea macrophylla
Hma1.2p1_1149F.1_g261770 Hydrangea macrophylla
HPP92_004799 Vanilla planifolia
HPP92_017344 Vanilla planifolia
HPP92_017351 Vanilla planifolia
HPP92_020148 Vanilla planifolia
HPP92_021595 Vanilla planifolia
HPP92_021865 Vanilla planifolia
HPP92_023131 Vanilla planifolia
HPP92_024109 Vanilla planifolia
HPP92_024124 Vanilla planifolia
HPP92_026429 Vanilla planifolia
HPP92_027126 Vanilla planifolia
HPP92_027127 Vanilla planifolia
Lalb_Chr02g0145841 Lupinus albus
Lalb_Chr05g0217241 Lupinus albus
Lalb_Chr05g0217761 Lupinus albus
Lalb_Chr06g0165961 Lupinus albus
Lalb_Chr16g0382901 Lupinus albus
Lj2g0019425 Lotus japonicus
Lj2g0023185 Lotus japonicus
Lj3P1012T42 Lonicera japonica
Lj3P1048T15 Lonicera japonica
Lj5g0023512 Lotus japonicus
Lj6P755T11 Lonicera japonica
Lj6P800T20 Lonicera japonica
Lsat_1_v5_gn_1_95200 Lactuca sativa
Lsat_1_v5_gn_3_49580 Lactuca sativa
Lsat_1_v5_gn_3_57900 Lactuca sativa
Lsat_1_v5_gn_6_19301 Lactuca sativa
Lsat_1_v5_gn_8_160440 Lactuca sativa
Lsat_1_v5_gn_8_40320 Lactuca sativa
Manes.01G111600 Manihot esculenta
Manes.01G196000 Manihot esculenta
Manes.01G225300 Manihot esculenta
Manes.02G069800 Manihot esculenta
Manes.05G001500 Manihot esculenta
Manes.05G093100 Manihot esculenta
Manes.06G066000 Manihot esculenta
Manes.14G104900 Manihot esculenta
Manes.15G006800 Manihot esculenta
Mapoly0024s0120 Marchantia polymorpha
MBI09_g07741_MAGBIO Magnolia biondii
MBI16_g06601_MAGBIO Magnolia biondii
MBI18_g24952_MAGBIO Magnolia biondii
MD13G1039200 Malus domestica
MD13G1086000 Malus domestica
MD16G1040100 Malus domestica
MD16G1085400 Malus domestica
MELO3C002947.2 Cucumis melo
MELO3C005347.2 Cucumis melo
MELO3C012028.2 Cucumis melo
MELO3C012263.2 Cucumis melo
MELO3C015943.2 Cucumis melo
MELO3C021287.2 Cucumis melo
Migut.L01046 Erythranthe guttata
Migut.L01453 Erythranthe guttata
Migut.O00685 Erythranthe guttata
Migut.O00779 Erythranthe guttata
Migut.O00975 Erythranthe guttata
MSTRG.10133 Avicennia marina
MSTRG.13546 Avicennia marina
MSTRG.2378 Avicennia marina
MSTRG.3872 Avicennia marina
MSTRG.629 Avicennia marina
MSTRG.7654 Avicennia marina
MSTRG.7865 Avicennia marina
MSTRG.854 Avicennia marina
Nitab4.5_0000034g0090 Nicotiana tabacum
Nitab4.5_0000257g0090 Nicotiana tabacum
Nitab4.5_0000615g0060 Nicotiana tabacum
Nitab4.5_0001616g0060 Nicotiana tabacum
Nitab4.5_0001616g0070 Nicotiana tabacum
Nitab4.5_0001642g0060 Nicotiana tabacum
Nitab4.5_0006492g0010 Nicotiana tabacum
Nitab4.5_0010399g0010 Nicotiana tabacum
Nitab4.5_0010399g0020 Nicotiana tabacum
Nitab4.5_0010523g0020 Nicotiana tabacum
Nn3g16998 Nelumbo nucifera
Nn3g17902 Nelumbo nucifera
Nn4g22907 Nelumbo nucifera
Nn4g23905 Nelumbo nucifera
Nn4g25662 Nelumbo nucifera
Nn6g32306 Nelumbo nucifera
Oeu012246.1 Olea europaea
Oeu013599.1 Olea europaea
Oeu017600.1 Olea europaea
Oeu018288.1 Olea europaea
Oeu026232.1 Olea europaea
Oeu026673.1 Olea europaea
Oeu034222.1 Olea europaea
Oeu039491.1 Olea europaea
Oeu046561.1 Olea europaea
Oeu051326.1 Olea europaea
Oeu054994.1 Olea europaea
Oeu057738.1 Olea europaea
Oeu059494.1 Olea europaea
Os01g0132766 Oryza sativa ssp. japonica
Os01g0512700 Oryza sativa ssp. japonica
Peaxi162Scf00065g00036 Petunia axillaris
Peaxi162Scf00753g00021 Petunia axillaris
Peaxi162Scf00753g00022 Petunia axillaris
Peaxi162Scf01141g00013 Petunia axillaris
Peaxi162Scf01206g00012 Petunia axillaris
PGR004G1520 Punica granatum
PGR102G0206 Punica granatum
PGR102G3337 Punica granatum
PGR119G1438 Punica granatum
PGR119G2049 Punica granatum
PGR119G2547 Punica granatum
PGSC0003DMG400014553 Solanum tuberosum
PGSC0003DMG400014574 Solanum tuberosum
PGSC0003DMG400014990 Solanum tuberosum
PGSC0003DMG400015611 Solanum tuberosum
PGSC0003DMG402024472 Solanum tuberosum
Phvul.001G211400 Phaseolus vulgaris
Phvul.002G075900 Phaseolus vulgaris
Phvul.002G076300 Phaseolus vulgaris
Phvul.002G082900 Phaseolus vulgaris
Phvul.003G110800 Phaseolus vulgaris
Phvul.007G029500 Phaseolus vulgaris
Phvul.008G007400 Phaseolus vulgaris
Phvul.009G253900 Phaseolus vulgaris
Potri.002G199200 Populus trichocarpa
Potri.004G097900 Populus trichocarpa
Potri.008G123100 Populus trichocarpa
Potri.008G193400 Populus trichocarpa
Potri.010G036400 Populus trichocarpa
Potri.010G122400 Populus trichocarpa
Potri.010G140700 Populus trichocarpa
Potri.014G123700 Populus trichocarpa
Potri.017G116300 Populus trichocarpa
Pp3c14_21120 Physcomitrium patens
Pp3c17_17640 Physcomitrium patens
Prupe.1G260700 Prunus persica
Prupe.1G314000 Prunus persica
Prupe.3G143800 Prunus persica
Psat2g089440 Pisum sativum
Psat2g113200 Pisum sativum
Psat6g225800 Pisum sativum
PSO017G0327 Papaver somniferum
PSO210G5632 Papaver somniferum
PSO478G2801 Papaver somniferum
PSO478G5026 Papaver somniferum
PSO591G0228 Papaver somniferum
PSO761G0358 Papaver somniferum
PSO832G4141 Papaver somniferum
QL01p012757 Quercus lobata
QL01p040570 Quercus lobata
QL02p051021 Quercus lobata
QL03p067113 Quercus lobata
QL06p011328 Quercus lobata
QL10p012430 Quercus lobata
QL12p016532 Quercus lobata
QL12p028923 Quercus lobata
RcHm_v2.0_Chr4g0424291 Rosa chinensis
RcHm_v2.0_Chr4g0434821 Rosa chinensis
Rhsim01G0289000 Rhododendron simsii
Rhsim04G0232300 Rhododendron simsii
Rhsim09G0105500 Rhododendron simsii
Rhsim12G0050500 Rhododendron simsii
Rhsim12G0125200 Rhododendron simsii
Sabra08G0093400 Salix brachista
Sabra08G0146900 Salix brachista
Sabra10G0028700 Salix brachista
Sabra10G0092500 Salix brachista
Sabra10G0108700 Salix brachista
Sabra14G0092000 Salix brachista
Sabra17G0096300 Salix brachista
SalBow8G0278 Salvia bowleyana
SalBow8G0885 Salvia bowleyana
SalBow8G0951 Salvia bowleyana
SalBow8G2134 Salvia bowleyana
SalBow8G2676 Salvia bowleyana
SalBow8G4472 Salvia bowleyana
SalBow8G4757 Salvia bowleyana
Sc11g0001400 Simmondsia chinensis
Sc11g0003530 Simmondsia chinensis
Sed0002254 Sechium edule
Sed0005236 Sechium edule
Sed0006491 Sechium edule
Sed0011460 Sechium edule
Sed0012189 Sechium edule
Sed0020245 Sechium edule
Sed0023103 Sechium edule
Sed0027507 Sechium edule
SEGI_04029 Sequoiadendron giganteum
SEGI_06019 Sequoiadendron giganteum
SEGI_33194 Sequoiadendron giganteum
SEGI_39833 Sequoiadendron giganteum
SGA_v2.0_scaffold166G38329 Striga asiatica
SGA_v2.0_scaffold170G38784 Striga asiatica
SGA_v2.0_scaffold36G14545 Striga asiatica
SGA_v2.0_scaffold38G14968 Striga asiatica
SGA_v2.0_scaffold444G51709 Striga asiatica
SGA_v2.0_scaffold63G21690 Striga asiatica
SHI15758 Sapria himalayana
Solyc01g060420.2 Solanum lycopersicum
Solyc03g113890.1 Solanum lycopersicum
Solyc05g006310.3 Solanum lycopersicum
Solyc05g009170.3 Solanum lycopersicum
Solyc05g009180.1 Solanum lycopersicum
Sopen01g026560 Solanum pennellii
Sopen05g002280 Solanum pennellii
Sopen05g004890 Solanum pennellii
Sopen05g004900 Solanum pennellii
Sp1g09110 Schrenkiella parvula
Sp5g21940 Schrenkiella parvula
Sp5g23410 Schrenkiella parvula
TAR365G0059 Trochodendron aralioides
TAR371G0161 Trochodendron aralioides
TAR371G0938 Trochodendron aralioides
TAR374G0543 Trochodendron aralioides
TAR622G0054 Trochodendron aralioides
TAR622G1380 Trochodendron aralioides
TAR629G2542 Trochodendron aralioides
THA.LOC104805577 Tarenaya hassleriana
THA.LOC104808327 Tarenaya hassleriana
THA.LOC104817063 Tarenaya hassleriana
THA.LOC104821919 Tarenaya hassleriana
THA.LOC104825311 Tarenaya hassleriana
Thecc.01G309700 Theobroma cacao
Thecc.02G225300 Theobroma cacao
Thecc.02G240900 Theobroma cacao
Thecc.04G132100 Theobroma cacao
Thecc.04G295100 Theobroma cacao
Thhalv10008773m.g Eutrema salsugineum
Thhalv10019525m.g Eutrema salsugineum
Thhalv10019825m.g Eutrema salsugineum
TPR.G13949 Trifolium pratense
TPR.G38346 Trifolium pratense
TPR.G4872 Trifolium pratense
TWI09G0832 Tripterygium wilfordii
TWI18G0415 Tripterygium wilfordii
TWI31G0261 Tripterygium wilfordii
TWI36G0426 Tripterygium wilfordii
TWI73G0097 Tripterygium wilfordii
TWI74G1378 Tripterygium wilfordii
TWI75G0118 Tripterygium wilfordii
TWI75G0561 Tripterygium wilfordii
TWI75G1804 Tripterygium wilfordii
TWI79G0479 Tripterygium wilfordii
unitig_0.g2589 Utricularia gibba
unitig_22.g6559 Utricularia gibba
unitig_22.g6865 Utricularia gibba
unitig_27.g25256 Utricularia gibba
unitig_37.g12407 Utricularia gibba
unitig_46.g18697 Utricularia gibba
unitig_62.g23722 Utricularia gibba
unitig_748.g8712 Utricularia gibba
vmacro10576 Vaccinium macrocarpon
vmacro16289 Vaccinium macrocarpon
VMungo0720G2679 Vigna mungo
VMungo1215G1309 Vigna mungo
VMungo1215G2390 Vigna mungo
VMungo1309G2127 Vigna mungo
VMungo1383G0745 Vigna mungo
Zm00001eb125240 Zea mays
Zm00001eb335320 Zea mays
Zm00001eb380490 Zea mays

User provided reference genes

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