Gene: AT1G10480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G10480
  • Transcript Identifier AT1G10480.1
  • Gene Type Coding gene
  • Location Chr1 : 3449734-3450369 : positive

Gene Family Information

  • ID HOM05D001250
  • #Genes/#Species 498/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G10480.1
  • symbol ZFP5
  • uniprot Q39264

Descriptions

  • Description zinc finger protein 5
  • Computational description zinc finger protein 5 (ZFP5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 905 Blast hits to 903 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 900; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010090
IEA
Gene Ontologytrichome morphogenesis
GO:0010090
IEA
InterProtrichome morphogenesis
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009740
IEA
GOA Databasegibberellic acid mediated signaling pathway
GO:0009740
IMP
IBA
Gene Ontologygibberellic acid mediated signaling pathway1 2
GO:0009736
IEA
GOA Databasecytokinin-activated signaling pathway
GO:0009736
IMP
IBA
Gene Ontologycytokinin-activated signaling pathway2 3
GO:0010026
IMP, IGI
IBA
Gene Ontologytrichome differentiation1 2 3
GO:0048767
IMP
Gene Ontologyroot hair elongation4
GO:0048766
IMP
Gene Ontologyroot hair initiation4
GO:0048510
IMP
Gene Ontologyregulation of timing of transition from vegetative to reproductive phase1
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding2 6
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity2 5
GO:0005515
IPI
Gene Ontologyprotein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044299 Zinc finger protein GIS3/ZFP5/ZFP6
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)