Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42490 Brassica napus
A03p21340 Brassica napus
A04p13210 Brassica napus
A04p29430 Brassica napus
A05p09520 Brassica napus
A06p29580 Brassica napus
Aa31LG11G870 Aethionema arabicum
Aa31LG5G21500 Aethionema arabicum
Aa31LG5G23870 Aethionema arabicum
Aa31LG9G1320 Aethionema arabicum
Aa31sc114G80 Aethionema arabicum
Actinidia06025 Actinidia chinensis
Actinidia11545 Actinidia chinensis
Actinidia19096 Actinidia chinensis
Actinidia20773 Actinidia chinensis
Actinidia32547 Actinidia chinensis
Actinidia33061 Actinidia chinensis
Actinidia36084 Actinidia chinensis
Ah.02g110470 Amaranthus hybridus
Ah.02g110490 Amaranthus hybridus
Ah.08g209980 Amaranthus hybridus
Ah.08g209990 Amaranthus hybridus
Ah.08g210000 Amaranthus hybridus
Ah.09g236000 Amaranthus hybridus
AL2G18680 Arabidopsis lyrata
AL4G32480 Arabidopsis lyrata
AL4G35760 Arabidopsis lyrata
AL7G49670 Arabidopsis lyrata
AL8G39780 Arabidopsis lyrata
Aqoxy3G02962 Aquilegia oxysepala
Aqoxy4G02713 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0ZCW7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.22MEII Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2L2RSC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.998PHG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9MW0DX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7K5NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HG7TPY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ3R8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1L7ZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGHG7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MBR1GC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MK5T9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8LEZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PP06PB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0DYG2 Arachis hypogaea
AT2G36330 Arabidopsis thaliana
AT2G38480 Arabidopsis thaliana
AT5G40300 Arabidopsis thaliana
AT5G62820 Arabidopsis thaliana
ATR0594G080 Amborella trichopoda
ATR0730G035 Amborella trichopoda
Atru.chr6.2206 Acer truncatum
Atru.chr6.2300 Acer truncatum
Atru.chr8.2349 Acer truncatum
Atru.chr9.2457 Acer truncatum
AUR62006289 Chenopodium quinoa
AUR62006290 Chenopodium quinoa
AUR62006291 Chenopodium quinoa
AUR62006292 Chenopodium quinoa
AUR62006294 Chenopodium quinoa
AUR62006297 Chenopodium quinoa
AUR62008218 Chenopodium quinoa
AUR62026339 Chenopodium quinoa
AUR62026340 Chenopodium quinoa
AUR62026341 Chenopodium quinoa
AUR62030971 Chenopodium quinoa
AUR62035504 Chenopodium quinoa
AUR62043217 Chenopodium quinoa
BcaB01g03681 Brassica carinata
BcaB02g09360 Brassica carinata
BcaB02g09695 Brassica carinata
BcaB06g27471 Brassica carinata
BcaB06g29055 Brassica carinata
BcaB07g29852 Brassica carinata
BcaC01g02524 Brassica carinata
BcaC01g05535 Brassica carinata
BcaC02g07462 Brassica carinata
BcaC02g07463 Brassica carinata
BcaC02g11749 Brassica carinata
BcaC03g18172 Brassica carinata
BolC2t12296H Brassica oleracea
BolC3t18646H Brassica oleracea
BolC4t22824H Brassica oleracea
BolC4t26290H Brassica oleracea
BolC4t28174H Brassica oleracea
BraA02t09177Z Brassica rapa
BraA03t11369Z Brassica rapa
BraA04t16980Z Brassica rapa
BraA04t18410Z Brassica rapa
BraA05t19904Z Brassica rapa
BraA06t25904Z Brassica rapa
C02p62420 Brassica napus
C03p63920 Brassica napus
C04p11770 Brassica napus
C04p46960 Brassica napus
C04p66720 Brassica napus
CANSAT35G0968 Cannabis sativa
CANSAT64G1579 Cannabis sativa
CANSAT80G2671 Cannabis sativa
CARHR130620 Cardamine hirsuta
CARHR133170 Cardamine hirsuta
CARHR261800 Cardamine hirsuta
CARHR276600 Cardamine hirsuta
Carub.0004s1811 Capsella rubella
Carub.0004s2046 Capsella rubella
Carub.0007s3534 Capsella rubella
Carub.0008s2354 Capsella rubella
Ca_07712_v3 Cicer arietinum L.
Ca_16184_v3 Cicer arietinum L.
Ca_21913_v3 Cicer arietinum L.
Ca_26733_v3 Cicer arietinum L.
Cc00_g13880 Coffea canephora
Cc04_g13810 Coffea canephora
Cc07_g02240 Coffea canephora
CDE02G0700 Ceratophyllum demersum
CDE06G1654 Ceratophyllum demersum
CDE06G1805 Ceratophyllum demersum
Cfa017104 Carpinus fangiana
Cfa017105 Carpinus fangiana
Cfa019107 Carpinus fangiana
Cfa021148 Carpinus fangiana
Ciclev10012823m.g Citrus clementina
Ciclev10015951m.g Citrus clementina
Ciclev10021392m.g Citrus clementina
CiPaw.03G038000 Carya illinoinensis
CiPaw.04G024800 Carya illinoinensis
CiPaw.10G161400 Carya illinoinensis
CiPaw.10G161500 Carya illinoinensis
CiPaw.11G027300 Carya illinoinensis
CiPaw.12G025700 Carya illinoinensis
ClCG06G016960 Citrullus lanatus
ClCG09G018890 Citrullus lanatus
ClCG10G022510 Citrullus lanatus
COL.COLO4_04602 Corchorus olitorius
COL.COLO4_14441 Corchorus olitorius
COL.COLO4_28951 Corchorus olitorius
COL.COLO4_30298 Corchorus olitorius
Cpa.g.sc124.52 Carica papaya
Cpa.g.sc39.87 Carica papaya
Cpa.g.sc5.247 Carica papaya
CsaV3_1G001550 Cucumis sativus L.
CsaV3_3G033340 Cucumis sativus L.
CsaV3_4G026670 Cucumis sativus L.
CsaV3_5G037240 Cucumis sativus L.
CSS0019449 Camellia sinensis var. sinensis
CSS0036405 Camellia sinensis var. sinensis
CSS0038681 Camellia sinensis var. sinensis
DCAR_015041 Daucus carota
DCAR_018663 Daucus carota
DCAR_023992 Daucus carota
DCAR_028890 Daucus carota
DCAR_028892 Daucus carota
Dinv02903 Davidia involucrata
Dinv12182 Davidia involucrata
Dinv20662 Davidia involucrata
Dinv35061 Davidia involucrata
Dinv35419 Davidia involucrata
Duzib084G1137 Durio zibethinus
Duzib093G0175 Durio zibethinus
Duzib128G1021 Durio zibethinus
Duzib147G0423 Durio zibethinus
Duzib187G1378 Durio zibethinus
Duzib205G0554 Durio zibethinus
Duzib264G1119 Durio zibethinus
ECA232G3297 Erigeron canadensis
ECA246G2365 Erigeron canadensis
ECA247G2309 Erigeron canadensis
EL10Ac4g08576 Beta vulgaris
EL10Ac5g10756 Beta vulgaris
EL10Ac7g16791 Beta vulgaris
EL10Ac7g16794 Beta vulgaris
EL10Ac7g16795 Beta vulgaris
Eucgr.A00628 Eucalyptus grandis
Eucgr.I01811 Eucalyptus grandis
Eucgr.K02941 Eucalyptus grandis
FAN02G0296 Fragaria x ananassa
FAN02G1495 Fragaria x ananassa
FAN05G0078 Fragaria x ananassa
FAN05G2526 Fragaria x ananassa
FAN08G3338 Fragaria x ananassa
FAN09G3571 Fragaria x ananassa
FAN09G3644 Fragaria x ananassa
FAN13G3335 Fragaria x ananassa
FAN14G2029 Fragaria x ananassa
FAN14G4900 Fragaria x ananassa
FAN14G5317 Fragaria x ananassa
FAN18G2165 Fragaria x ananassa
FvH4_5g05230 Fragaria vesca
FvH4_6g10520 Fragaria vesca
FvH4_6g50680 Fragaria vesca
Glyma.01G128000 Glycine max
Glyma.03G042800 Glycine max
Glyma.04G181900 Glycine max
Glyma.05G037100 Glycine max
Glyma.06G183000 Glycine max
Glyma.09G280300 Glycine max
Glyma.13G168500 Glycine max
Glyma.16G073700 Glycine max
Glyma.17G090100 Glycine max
Glyma.18G208700 Glycine max
Glyma.19G008800 Glycine max
Glyma.19G079900 Glycine max
Gohir.A01G230132 Gossypium hirsutum
Gohir.A01G230250 Gossypium hirsutum
Gohir.A04G095900 Gossypium hirsutum
Gohir.A07G219900 Gossypium hirsutum
Gohir.A09G171900 Gossypium hirsutum
Gohir.A12G273700 Gossypium hirsutum
Gohir.D01G220101 Gossypium hirsutum
Gohir.D04G135700 Gossypium hirsutum
Gohir.D07G226600 Gossypium hirsutum
Gohir.D09G167600 Gossypium hirsutum
Gohir.D12G274400 Gossypium hirsutum
Gorai.001G261500 Gossypium raimondii
Gorai.002G266800 Gossypium raimondii
Gorai.006G189300 Gossypium raimondii
Gorai.008G294900 Gossypium raimondii
Gorai.012G119500 Gossypium raimondii
GSVIVG01007763001 Vitis vinifera
GSVIVG01030259001 Vitis vinifera
GSVIVG01032477001 Vitis vinifera
HanXRQChr02g0037391 Helianthus annuus
HanXRQChr09g0266231 Helianthus annuus
HanXRQChr10g0295771 Helianthus annuus
HanXRQChr16g0509781 Helianthus annuus
Haze_07460 Corylus avellana
Haze_21094 Corylus avellana
Haze_21095 Corylus avellana
Haze_21096 Corylus avellana
Hma1.2p1_0176F.1_g077520 Hydrangea macrophylla
Hma1.2p1_0479F.1_g161710 Hydrangea macrophylla
Hma1.2p1_0501F.1_g167290 Hydrangea macrophylla
Hma1.2p1_0858F.1_g229430 Hydrangea macrophylla
Hma1.2p1_0993F.1_g245530 Hydrangea macrophylla
HPP92_001132 Vanilla planifolia
HPP92_006176 Vanilla planifolia
HPP92_006186 Vanilla planifolia
HPP92_009698 Vanilla planifolia
HPP92_021834 Vanilla planifolia
Hund02272 Selenicereus undatus
Hund02738 Selenicereus undatus
Hund03804 Selenicereus undatus
Hund09431 Selenicereus undatus
Lalb_Chr00c03g0404211 Lupinus albus
Lalb_Chr01g0023441 Lupinus albus
Lalb_Chr01g0023451 Lupinus albus
Lalb_Chr03g0043581 Lupinus albus
Lalb_Chr03g0043591 Lupinus albus
Lalb_Chr07g0182701 Lupinus albus
Lalb_Chr11g0071171 Lupinus albus
Lalb_Chr12g0201551 Lupinus albus
Lalb_Chr12g0207401 Lupinus albus
Lalb_Chr12g0207431 Lupinus albus
Lalb_Chr19g0124121 Lupinus albus
Lalb_Chr21g0319441 Lupinus albus
Lj1g0006910 Lotus japonicus
Lj1g0012517 Lotus japonicus
Lj1g0015627 Lotus japonicus
Lj2A66T65 Lonicera japonica
Lj2g0003983 Lotus japonicus
Lj2g0008329 Lotus japonicus
Lj3A945G16 Lonicera japonica
Lj3g0017137 Lotus japonicus
Lj3g0022456 Lotus japonicus
Lj4g0000330 Lotus japonicus
Lj5C123T11 Lonicera japonica
Lj7A591T79 Lonicera japonica
Lsat_1_v5_gn_1_26940 Lactuca sativa
Lsat_1_v5_gn_1_26960 Lactuca sativa
Lsat_1_v5_gn_4_182300 Lactuca sativa
Lsat_1_v5_gn_5_17320 Lactuca sativa
Lsat_1_v5_gn_8_103660 Lactuca sativa
Manes.06G104300 Manihot esculenta
Manes.09G112600 Manihot esculenta
Manes.14G066500 Manihot esculenta
Manes.15G181800 Manihot esculenta
Manes.17G121200 Manihot esculenta
Mapoly0096s0068 Marchantia polymorpha
MBI10_g10243_MAGBIO Magnolia biondii
MBI15_g01645_MAGBIO Magnolia biondii
MD04G1167600 Malus domestica
MD06G1175400 Malus domestica
MD09G1034100 Malus domestica
MD12G1180900 Malus domestica
MD13G1274000 Malus domestica
MD14G1182200 Malus domestica
Medtr3g078010 Medicago truncatula
Medtr4g013270 Medicago truncatula
Medtr4g015730 Medicago truncatula
Medtr4g015745 Medicago truncatula
Medtr4g106940 Medicago truncatula
Medtr6g007160 Medicago truncatula
Medtr7g034390 Medicago truncatula
Medtr7g071110 Medicago truncatula
MELO3C009126.2 Cucumis melo
MELO3C017095.2 Cucumis melo
MELO3C021535.2 Cucumis melo
MELO3C029172.2 Cucumis melo
MELO3C033444.2 Cucumis melo
Migut.D01923 Erythranthe guttata
Migut.H00119 Erythranthe guttata
Migut.I00019 Erythranthe guttata
Migut.L02054 Erythranthe guttata
Migut.O00918 Erythranthe guttata
Migut.O00963 Erythranthe guttata
MSTRG.11445 Avicennia marina
MSTRG.18970 Avicennia marina
MSTRG.24017 Avicennia marina
MSTRG.3170 Avicennia marina
MSTRG.4377 Avicennia marina
MSTRG.5536 Avicennia marina
Nitab4.5_0000003g0540 Nicotiana tabacum
Nitab4.5_0000047g0150 Nicotiana tabacum
Nitab4.5_0000355g0220 Nicotiana tabacum
Nitab4.5_0000852g0040 Nicotiana tabacum
Nitab4.5_0001017g0040 Nicotiana tabacum
Nitab4.5_0001226g0040 Nicotiana tabacum
Nitab4.5_0003337g0050 Nicotiana tabacum
Nitab4.5_0003850g0040 Nicotiana tabacum
Nitab4.5_0005176g0040 Nicotiana tabacum
Nitab4.5_0005862g0010 Nicotiana tabacum
Nn2g13279 Nelumbo nucifera
Nn3g16878 Nelumbo nucifera
Nn4g22785 Nelumbo nucifera
Oeu016371.1 Olea europaea
Oeu024689.1 Olea europaea
Oeu024761.1 Olea europaea
Oeu026970.1 Olea europaea
Oeu028421.1 Olea europaea
Oeu035985.1 Olea europaea
Oeu043062.1 Olea europaea
Oeu053074.1 Olea europaea
Oeu057642.1 Olea europaea
Oeu062985.2 Olea europaea
Os01g0640700 Oryza sativa ssp. japonica
Os01g0661000 Oryza sativa ssp. japonica
Os02g0134500 Oryza sativa ssp. japonica
Os03g0298300 Oryza sativa ssp. japonica
Os03g0817100 Oryza sativa ssp. japonica
Os05g0344400 Oryza sativa ssp. japonica
Os07g0692200 Oryza sativa ssp. japonica
Peaxi162Scf00017g02823 Petunia axillaris
Peaxi162Scf00129g01125 Petunia axillaris
Peaxi162Scf00264g00838 Petunia axillaris
Peaxi162Scf00689g00217 Petunia axillaris
Peaxi162Scf00744g00227 Petunia axillaris
PGR031G3439 Punica granatum
PGR044G0099 Punica granatum
PGR083G2746 Punica granatum
PGR102G2509 Punica granatum
PGR142G1138 Punica granatum
PGSC0003DMG400011620 Solanum tuberosum
PGSC0003DMG400011859 Solanum tuberosum
PGSC0003DMG400024498 Solanum tuberosum
PGSC0003DMG403000524 Solanum tuberosum
Phvul.003G199800 Phaseolus vulgaris
Phvul.004G014400 Phaseolus vulgaris
Phvul.008G090400 Phaseolus vulgaris
Phvul.008G155100 Phaseolus vulgaris
Phvul.009G179200 Phaseolus vulgaris
Phvul.010G062600 Phaseolus vulgaris
Phvul.010G062800 Phaseolus vulgaris
Potri.012G079800 Populus trichocarpa
Potri.015G075100 Populus trichocarpa
Potri.016G128200 Populus trichocarpa
Prupe.3G284200 Prunus persica
Prupe.5G174700 Prunus persica
Prupe.6G285800 Prunus persica
Prupe.6G285900 Prunus persica
Psat3g123520 Pisum sativum
Psat3g184640 Pisum sativum
Psat4g057760 Pisum sativum
Psat5g114520 Pisum sativum
Psat7g249480 Pisum sativum
PSO017G0146 Papaver somniferum
PSO017G2556 Papaver somniferum
PSO017G2842 Papaver somniferum
PSO017G5250 Papaver somniferum
PSO017G5735 Papaver somniferum
PSO017G6895 Papaver somniferum
PSO063G0161 Papaver somniferum
PSO339G6233 Papaver somniferum
PSO349G0107 Papaver somniferum
PSO349G0235 Papaver somniferum
PSO349G0256 Papaver somniferum
PSO349G0320 Papaver somniferum
PSO384G2232 Papaver somniferum
PSO832G4192 Papaver somniferum
QL02p076631 Quercus lobata
QL07p033687 Quercus lobata
QL07p033728 Quercus lobata
QL10p011886 Quercus lobata
RcHm_v2.0_Chr2g0171451 Rosa chinensis
RcHm_v2.0_Chr2g0171471 Rosa chinensis
RcHm_v2.0_Chr3g0461491 Rosa chinensis
RcHm_v2.0_Chr4g0422081 Rosa chinensis
RcHm_v2.0_Chr7g0193681 Rosa chinensis
Rhsim04G0124100 Rhododendron simsii
Rhsim04G0124200 Rhododendron simsii
Rhsim08G0171300 Rhododendron simsii
Rhsim10G0022200 Rhododendron simsii
Rhsim12G0164100 Rhododendron simsii
Sabra12G0057000 Salix brachista
Sabra15G0098900 Salix brachista
Sabra16G0130200 Salix brachista
SalBow1G2265 Salvia bowleyana
SalBow1G4179 Salvia bowleyana
SalBow2G3124 Salvia bowleyana
SalBow4G1866 Salvia bowleyana
SalBow5G1632 Salvia bowleyana
SalBow5G2380 Salvia bowleyana
Sc04g0001840 Simmondsia chinensis
Sc07g0003040 Simmondsia chinensis
Sc07g0005740 Simmondsia chinensis
Sc12g0005360 Simmondsia chinensis
Sc19g0002630 Simmondsia chinensis
Sed0001885 Sechium edule
Sed0004492 Sechium edule
Sed0004923 Sechium edule
Sed0014749 Sechium edule
Sed0022013 Sechium edule
Sed0022296 Sechium edule
Sed0026305 Sechium edule
SEGI_01255 Sequoiadendron giganteum
SEGI_01953 Sequoiadendron giganteum
SEGI_06720 Sequoiadendron giganteum
SEGI_25696 Sequoiadendron giganteum
SEGI_30233 Sequoiadendron giganteum
SEGI_40256 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31183 Striga asiatica
SGA_v2.0_scaffold135G34863 Striga asiatica
SGA_v2.0_scaffold240G44063 Striga asiatica
SGA_v2.0_scaffold25G10846 Striga asiatica
SGA_v2.0_scaffold7G04126 Striga asiatica
SHI07707 Sapria himalayana
SHI12886 Sapria himalayana
Solyc02g086860.4 Solanum lycopersicum
Solyc03g114290.4 Solanum lycopersicum
Solyc06g071440.4 Solanum lycopersicum
Solyc09g014993.1 Solanum lycopersicum
Solyc10g076300.2 Solanum lycopersicum
Sopen02g031630 Solanum pennellii
Sopen03g033390 Solanum pennellii
Sopen06g027720 Solanum pennellii
Sopen09g007980 Solanum pennellii
Sopen10g027920 Solanum pennellii
Sp2g25970 Schrenkiella parvula
Sp4g18580 Schrenkiella parvula
Sp4g20810 Schrenkiella parvula
Sp7g01650 Schrenkiella parvula
TAR374G0262 Trochodendron aralioides
TAR623G1791 Trochodendron aralioides
TAR629G0033 Trochodendron aralioides
THA.LOC104805396 Tarenaya hassleriana
THA.LOC104823359 Tarenaya hassleriana
THA.LOC104824517 Tarenaya hassleriana
Thecc.03G010800 Theobroma cacao
Thecc.04G009000 Theobroma cacao
Thecc.05G005700 Theobroma cacao
Thecc.05G005800 Theobroma cacao
Thhalv10004696m.g Eutrema salsugineum
Thhalv10017222m.g Eutrema salsugineum
Thhalv10017282m.g Eutrema salsugineum
Thhalv10027871m.g Eutrema salsugineum
TPR.G1678 Trifolium pratense
TPR.G18651 Trifolium pratense
TPR.G2258 Trifolium pratense
TPR.G29222 Trifolium pratense
TPR.G30813 Trifolium pratense
TPR.G37561 Trifolium pratense
TPR.G5191 Trifolium pratense
TWI56G0112 Tripterygium wilfordii
TWI60G0515 Tripterygium wilfordii
TWI74G0137 Tripterygium wilfordii
TWI77G0871 Tripterygium wilfordii
TWI81G0373 Tripterygium wilfordii
TWI81G0407 Tripterygium wilfordii
unitig_26.g8798 Utricularia gibba
unitig_26.g8799 Utricularia gibba
unitig_27.g24875 Utricularia gibba
unitig_699.g19375 Utricularia gibba
unitig_744.g24401 Utricularia gibba
unitig_750.g28472 Utricularia gibba
vmacro05823 Vaccinium macrocarpon
vmacro08916 Vaccinium macrocarpon
vmacro08917 Vaccinium macrocarpon
vmacro16605 Vaccinium macrocarpon
vmacro17658 Vaccinium macrocarpon
vmacro19378 Vaccinium macrocarpon
vmacro20331 Vaccinium macrocarpon
VMungo0464G0787 Vigna mungo
VMungo1215G0222 Vigna mungo
VMungo1309G1620 Vigna mungo
VMungo1383G0007 Vigna mungo
VMungo1383G0475 Vigna mungo
Zm00001eb013830 Zea mays
Zm00001eb052190 Zea mays
Zm00001eb157790 Zea mays
Zm00001eb209150 Zea mays
Zm00001eb212010 Zea mays
Zm00001eb231550 Zea mays
Zm00001eb286320 Zea mays
Zm00001eb331480 Zea mays
Zm00001eb396690 Zea mays

User provided reference genes

Program Settings