Interactive Phylogenetics Module

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
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	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'acertr',
	'common_name' => 'Acer truncatum',
	'tax_id' => '47965',
	'version' => 'v2.0'
)
$local_species = 'acertr'
$disabled = ''
$selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
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	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ach',
	'common_name' => 'Actinidia chinensis',
	'tax_id' => '3625',
	'version' => 'V3.0'
)
$local_species = 'ach'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
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		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
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		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
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		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
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		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'aar',
	'common_name' => 'Aethionema arabicum',
	'tax_id' => '228871',
	'version' => 'v3.1'
)
$local_species = 'aar'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
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		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
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		'BcaB04g18311' => 'bca',
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		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
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		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
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		'BcaC06g32957' => 'bca',
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		'BcaC06g33453' => 'bca',
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		'BcaNung00250' => 'bca',
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		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
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		'BolC4t24577H' => 'bol',
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		'BolC7t45263H' => 'bol',
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		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
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		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
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		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
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		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
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		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
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		'C07p47350' => 'bna',
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		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
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		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
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		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
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		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'amhyb',
	'common_name' => 'Amaranthus hybridus',
	'tax_id' => '3565',
	'version' => 'v1.0'
)
$local_species = 'amhyb'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
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	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'atr',
	'common_name' => 'Amborella trichopoda',
	'tax_id' => '13333',
	'version' => 'JGI v1.0'
)
$local_species = 'atr'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'aag',
	'common_name' => 'Anthoceros agrestis',
	'tax_id' => '41834',
	'version' => 'v1.1'
)
$local_species = 'aag'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
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		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
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		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
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		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
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		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
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		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
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		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
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		'Cfa009470' => 'cfa',
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		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
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		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
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		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
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		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
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		'FAN22G2263' => 'fan',
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		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
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		'Lj7P313T4' => 'lonja',
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		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'aox',
	'common_name' => 'Aquilegia oxysepala',
	'tax_id' => '432649',
	'version' => 'v1.0'
)
$local_species = 'aox'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
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		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'aly',
	'common_name' => 'Arabidopsis lyrata',
	'tax_id' => '59689',
	'version' => 'JGI v2.1'
)
$local_species = 'aly'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
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	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ath',
	'common_name' => 'Arabidopsis thaliana',
	'tax_id' => '3702',
	'version' => 'Araport11'
)
$local_species = 'ath'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ama',
	'common_name' => 'Avicennia marina',
	'tax_id' => '82927',
	'version' => 'v1.1 20200527'
)
$local_species = 'ama'
$disabled = ''
$selected = ''
$num_hits = (int) 0
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
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		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
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		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'bvu',
	'common_name' => 'Beta vulgaris',
	'tax_id' => '161934',
	'version' => 'EL10_1.0'
)
$local_species = 'bvu'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
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	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'bca',
	'common_name' => 'Brassica carinata',
	'tax_id' => '52824',
	'version' => 'V1.0'
)
$local_species = 'bca'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
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	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'bna',
	'common_name' => 'Brassica napus',
	'tax_id' => '3708',
	'version' => 'v2.0'
)
$local_species = 'bna'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
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		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
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		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
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		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
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		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
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		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
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		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
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		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
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		'Dinv27366' => 'din',
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		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
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		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
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		'FAN05G2988' => 'fan',
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		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
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		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
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		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
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		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
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		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
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		'Nn7g36920' => 'nnu',
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		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
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		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
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		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'bol',
	'common_name' => 'Brassica oleracea',
	'tax_id' => '109376',
	'version' => 'v1.0'
)
$local_species = 'bol'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'bra',
	'common_name' => 'Brassica rapa',
	'tax_id' => '3711',
	'version' => 'v1.0'
)
$local_species = 'bra'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
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	'MD13G1169700' => 'mdo',
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	'MD16G1170900' => 'mdo',
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	'Migut.N03311' => 'egut',
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	'Nn2g15294' => 'nnu',
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	'Nn4g25898' => 'nnu',
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	'Oeu030040.1' => 'oeu',
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	'Oeu063348.1' => 'oeu',
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	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
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	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
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	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
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	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
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	'Prupe.1G211700' => 'ppe',
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	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
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	'QL03p012524' => 'qlo',
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	'QL03p021168' => 'qlo',
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	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
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	'QL12p030197' => 'qlo',
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	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
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	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
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	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
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	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
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	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
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	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
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	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
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	'SHI18112' => 'shi',
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	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'camsi',
	'common_name' => 'Camellia sinensis var. sinensis',
	'tax_id' => '542762',
	'version' => 'CSS_ChrLev_20200506'
)
$local_species = 'camsi'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
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	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cansat',
	'common_name' => 'Cannabis sativa',
	'tax_id' => '3483',
	'version' => 'cs10'
)
$local_species = 'cansat'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
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		'CANSAT80G2586' => 'cansat',
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		'Carub.0001s3869' => 'cru',
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		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
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		'Cc00_g25620' => 'ccan',
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		'Cc10_g10870' => 'ccan',
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		'CDE09G0399' => 'cde',
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		'ClCG03G017040' => 'cla',
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		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
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		'Cpa.g.sc48.80' => 'cpa',
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		'CsaV3_1G038880' => 'csa',
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		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
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		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
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		'FAN04G1523' => 'fan',
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		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
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		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'Lj7P327T5' => 'lonja',
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		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
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		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
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		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
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		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
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		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
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		'Migut.C01170' => 'egut',
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		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
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		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
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		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cru',
	'common_name' => 'Capsella rubella',
	'tax_id' => '81985',
	'version' => 'JGI v1.1'
)
$local_species = 'cru'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
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		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
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		'Manes.15G013300' => 'mes',
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		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
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		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
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		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
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		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'can',
	'common_name' => 'Capsicum annuum',
	'tax_id' => '4072',
	'version' => 'Pepper Genome v2.0'
)
$local_species = 'can'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
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	'Peaxi162Scf00037g00099' => 'pax',
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	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'chi',
	'common_name' => 'Cardamine hirsuta',
	'tax_id' => '50463',
	'version' => 'v1.0'
)
$local_species = 'chi'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
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		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
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$sidebar_info = array(
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	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cpa',
	'common_name' => 'Carica papaya',
	'tax_id' => '3649',
	'version' => 'JGI ASGPB0.4'
)
$local_species = 'cpa'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
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		'COL.COLO4_34625' => 'col',
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		'Cpa.g.sc16.163' => 'cpa',
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		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
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		'Dinv07912' => 'din',
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		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
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		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
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		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
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		'HanXRQChr08g0212611' => 'han',
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		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
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		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
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		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
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		'Manes.08G099500' => 'mes',
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		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
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		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
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		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
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		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
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		'Migut.C01170' => 'egut',
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		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
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		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
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		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
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		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
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		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
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		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
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		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
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		'Phvul.003G104400' => 'pvu',
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		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
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		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
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		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
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		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
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		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cfa',
	'common_name' => 'Carpinus fangiana',
	'tax_id' => '176857',
	'version' => 'v1.0'
)
$local_species = 'cfa'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
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	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cil',
	'common_name' => 'Carya illinoinensis',
	'tax_id' => '32201',
	'version' => 'v1.1'
)
$local_species = 'cil'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
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	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cde',
	'common_name' => 'Ceratophyllum demersum',
	'tax_id' => '4428',
	'version' => 'v1.0'
)
$local_species = 'cde'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cqu',
	'common_name' => 'Chenopodium quinoa',
	'tax_id' => '63459',
	'version' => 'KAUST v1.0'
)
$local_species = 'cqu'
$disabled = ''
$selected = ''
$num_hits = (int) 0
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
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		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
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		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
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		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
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		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
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		'BraA09t41904Z' => 'bra',
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		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
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		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
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		'CAN.G1971.1' => 'can',
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		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
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		'CARHR091720' => 'chi',
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		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
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		'Carub.0007s2594' => 'cru',
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		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
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		'Ciclev10005259m.g' => 'ccl',
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		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
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		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
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		'Cpa.g.sc70.37' => 'cpa',
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		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
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		'Dinv07912' => 'din',
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		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
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		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
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		'Glyma.09G045700' => 'gma',
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		'Gohir.D11G309750' => 'ghi',
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		'Gorai.008G010000' => 'gra',
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		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
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		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
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		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
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		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
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		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
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		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
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		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
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		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
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		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
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		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'MSTRG.22871' => 'ama',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
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		'Oeu017726.1' => 'oeu',
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		'Oeu030040.1' => 'oeu',
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		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
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		'Oeu063348.1' => 'oeu',
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		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
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		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
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		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'car',
	'common_name' => 'Cicer arietinum L.',
	'tax_id' => '3827',
	'version' => 'v3.0'
)
$local_species = 'car'
$disabled = ''
$selected = ''
$num_hits = (int) 0
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
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	'CSS0011101' => 'camsi',
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	'CSS0024986' => 'camsi',
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	'DCAR_009673' => 'dca',
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	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
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	'DCAR_030533' => 'dca',
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	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
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	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
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	'Duzib187G0555' => 'dzi',
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	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
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	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
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	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
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	'Eucgr.I01570' => 'egr',
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	'FAN11G1495' => 'fan',
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	'FAN22G2263' => 'fan',
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	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
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	'Glyma.07G248600' => 'gma',
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	'Gohir.1Z049522' => 'ghi',
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	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
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	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
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	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
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	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
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	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
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	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
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	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
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	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
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	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
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	'MSTRG.22871' => 'ama',
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	'Nn2g15294' => 'nnu',
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	'Nn4g25898' => 'nnu',
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	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
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	'Oeu050888.1' => 'oeu',
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	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
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	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
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	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
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	'Potri.010G024200' => 'ptr',
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	'Pp3c18_18670' => 'ppa',
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	'PSO017G3240' => 'pso',
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	'PSO591G0270' => 'pso',
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	'QL03p021168' => 'qlo',
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	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
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	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
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	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
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	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
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	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
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	'Sc09g0003020' => 'sci',
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	'Sc17g0003320' => 'sci',
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	'Sed0006577' => 'sed',
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	'Sed0013663' => 'sed',
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	'Sed0014258' => 'sed',
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	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
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	'SGA_v2.0_scaffold25G11102' => 'sas',
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	'SHI18112' => 'shi',
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	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
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	'Sp1g07670' => 'spa',
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	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
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	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cla',
	'common_name' => 'Citrullus lanatus',
	'tax_id' => '3654',
	'version' => 'WCG v2.0'
)
$local_species = 'cla'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
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	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ccl',
	'common_name' => 'Citrus clementina',
	'tax_id' => '85681',
	'version' => 'JGI v1.0'
)
$local_species = 'ccl'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ccan',
	'common_name' => 'Coffea canephora',
	'tax_id' => '49390',
	'version' => 'Coffee Genome Hub v1'
)
$local_species = 'ccan'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
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		'Cc10_g10870' => 'ccan',
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		'CDE09G0399' => 'cde',
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		'CiPaw.02G000100' => 'cil',
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		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
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		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
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		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
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		'FAN04G1523' => 'fan',
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		'FAN09G1327' => 'fan',
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		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
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		'FvH4_4g17890' => 'fve',
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		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
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		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
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		'GSVIVG01037484001' => 'vvi',
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		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
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		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'col',
	'common_name' => 'Corchorus olitorius',
	'tax_id' => '93759',
	'version' => 'GenBank v1.0'
)
$local_species = 'col'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
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	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cav',
	'common_name' => 'Corylus avellana',
	'tax_id' => '13451',
	'version' => 'v1.0'
)
$local_species = 'cav'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'cme',
	'common_name' => 'Cucumis melo',
	'tax_id' => '3656',
	'version' => 'Melonomics v3.6.1'
)
$local_species = 'cme'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
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		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
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		'C04p30430' => 'bna',
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		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
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		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
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		'CARHR091720' => 'chi',
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		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
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		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
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		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
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		'CDE09G0399' => 'cde',
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		'CiPaw.07G020300' => 'cil',
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		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
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		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
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		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
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		'FAN22G2168' => 'fan',
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		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
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		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
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		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
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		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
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		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'csa',
	'common_name' => 'Cucumis sativus L.',
	'tax_id' => '3659',
	'version' => 'v3.0'
)
$local_species = 'csa'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
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		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'dca',
	'common_name' => 'Daucus carota',
	'tax_id' => '4039',
	'version' => 'JGI v2.0'
)
$local_species = 'dca'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
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	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'din',
	'common_name' => 'Davidia involucrata',
	'tax_id' => '16924',
	'version' => 'v1.0'
)
$local_species = 'din'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'dzi',
	'common_name' => 'Durio zibethinus',
	'tax_id' => '66656',
	'version' => 'Duzib1.0'
)
$local_species = 'dzi'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
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		'BolC7t45263H' => 'bol',
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		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
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		'BraA01t02092Z' => 'bra',
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		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
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		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
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		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
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		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
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		'Cfa015377' => 'cfa',
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		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
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		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
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		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
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		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
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		'GSVIVG01037484001' => 'vvi',
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		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
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		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
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		'Lj3P818T23' => 'lonja',
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		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
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		'Lj7A317T45' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
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		'Lj7C326T3' => 'lonja',
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		'Lj7P313T4' => 'lonja',
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		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'eca',
	'common_name' => 'Erigeron canadensis',
	'tax_id' => '72917',
	'version' => 'V1.0'
)
$local_species = 'eca'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
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	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'egut',
	'common_name' => 'Erythranthe guttata',
	'tax_id' => '4155',
	'version' => 'v2.0'
)
$local_species = 'egut'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
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	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'egr',
	'common_name' => 'Eucalyptus grandis',
	'tax_id' => '71139',
	'version' => 'v2.0'
)
$local_species = 'egr'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
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		'Cpa.g.sc48.80' => 'cpa',
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		'CsaV3_2G006570' => 'csa',
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		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
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		'Dinv07912' => 'din',
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		'Dinv27366' => 'din',
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		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
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		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
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		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
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		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
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		'FAN04G1523' => 'fan',
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		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
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		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
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		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
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		'HanXRQChr01g0027071' => 'han',
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		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
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		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
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		'Lj3P818T23' => 'lonja',
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		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
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		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
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		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
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		'Oeu050888.1' => 'oeu',
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		'Oeu058950.1' => 'oeu',
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		'Oeu063348.1' => 'oeu',
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		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'esa',
	'common_name' => 'Eutrema salsugineum',
	'tax_id' => '72664',
	'version' => 'v1.0'
)
$local_species = 'esa'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
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		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
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		'AUR62033183' => 'cqu',
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		'CAN.G1652.15' => 'can',
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		'CANSAT54G1245' => 'cansat',
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		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
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		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
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		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
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		'Cfa006616' => 'cfa',
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		'CiPaw.02G000100' => 'cil',
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		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
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		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
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		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
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		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
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		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
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		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
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		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
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		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
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		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
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		'HanXRQChr03g0080821' => 'han',
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		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
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		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
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		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
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		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
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		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
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		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
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		'Lj3P818T23' => 'lonja',
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		'Lj7P313T4' => 'lonja',
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		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'fve',
	'common_name' => 'Fragaria vesca',
	'tax_id' => '57918',
	'version' => 'V4.0.a2'
)
$local_species = 'fve'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
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	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'fan',
	'common_name' => 'Fragaria x ananassa',
	'tax_id' => '3747',
	'version' => 'V1.0.a1'
)
$local_species = 'fan'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
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	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'gma',
	'common_name' => 'Glycine max',
	'tax_id' => '3847',
	'version' => 'JGI Wm82.a4.v1'
)
$local_species = 'gma'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
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		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
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		'CAN.G1971.1' => 'can',
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		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
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		'CARHR290160' => 'chi',
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		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
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		'Cfa006615' => 'cfa',
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		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
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		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
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		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
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		'CSS0023807' => 'camsi',
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		'DCAR_009673' => 'dca',
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		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
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		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
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		'FAN15G0232' => 'fan',
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		'FAN22G2263' => 'fan',
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		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
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		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
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		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
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		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
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		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
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		'Lj7C326T3' => 'lonja',
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		'Lj7P313T4' => 'lonja',
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		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'ghi',
	'common_name' => 'Gossypium hirsutum',
	'tax_id' => '3635',
	'version' => 'v2.1'
)
$local_species = 'ghi'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
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		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
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		'Medtr4g119780' => 'mtr',
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		'MELO3C021335.2' => 'cme',
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		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
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		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'gra',
	'common_name' => 'Gossypium raimondii',
	'tax_id' => '29730',
	'version' => 'v2.1'
)
$local_species = 'gra'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
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	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'han',
	'common_name' => 'Helianthus annuus',
	'tax_id' => '4232',
	'version' => 'r1.2'
)
$local_species = 'han'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'hma',
	'common_name' => 'Hydrangea macrophylla',
	'tax_id' => '23110',
	'version' => 'v2.1'
)
$local_species = 'hma'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
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		'BolC1t02665H' => 'bol',
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		'BolC8t48884H' => 'bol',
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		'BraA08t33182Z' => 'bra',
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		'C01p27160' => 'bna',
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		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
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		'C04p30430' => 'bna',
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		'CANSAT78G0327' => 'cansat',
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		'Ca_21529_v3' => 'car',
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		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
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		'COL.COLO4_23398' => 'col',
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		'Cpa.g.sc16.163' => 'cpa',
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		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
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		'Dinv07912' => 'din',
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		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
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		'Dinv27367' => 'din',
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		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
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		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
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		'ECA233G2183' => 'eca',
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		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
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		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
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		'Eucgr.B01929' => 'egr',
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		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
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		'HanXRQChr08g0212611' => 'han',
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		'Haze_04160' => 'cav',
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		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
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		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
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		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
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		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
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		'Manes.15G013300' => 'mes',
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		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
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		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
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		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
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		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
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		'Migut.C01170' => 'egut',
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		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
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		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
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		'MSTRG.22871' => 'ama',
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		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
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		'Oeu024979.1' => 'oeu',
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		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
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		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
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		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
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		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
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		'Phvul.003G104400' => 'pvu',
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		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
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		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
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		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
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		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
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		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'lsa',
	'common_name' => 'Lactuca sativa',
	'tax_id' => '4236',
	'version' => 'v8.0'
)
$local_species = 'lsa'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
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	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'lonja',
	'common_name' => 'Lonicera japonica',
	'tax_id' => '105884',
	'version' => 'v1.0'
)
$local_species = 'lonja'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
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	'MBI19_g00436_MAGBIO' => 'mbi',
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	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
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	'Oeu030041.1' => 'oeu',
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	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
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	'PGR083G0395' => 'pgr',
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	'PGSC0003DMG400024703' => 'stu',
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	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
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	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
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	'Pp3c18_18670' => 'ppa',
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	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'lja',
	'common_name' => 'Lotus japonicus',
	'tax_id' => '34305',
	'version' => 'Lj1.0v1'
)
$local_species = 'lja'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
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		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
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		'Lj7P313T4' => 'lonja',
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		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
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		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
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		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'lal',
	'common_name' => 'Lupinus albus',
	'tax_id' => '3870',
	'version' => 'v1.0'
)
$local_species = 'lal'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933

Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]
Code Context
        $disabled    = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";

        $selected    = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";

        $num_hits    = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp'
$dataForView = array(
	'sidebar_info' => array(
		'gf_id' => 'HOM05D000865',
		'msa_exists' => array(
			'full' => true,
			'edited' => true
		),
		'tree_exists' => true,
		'num_genes' => '692',
		'num_species' => '92'
	),
	'sidebar' => 'gene_family_sidebar',
	'navigation_bar_info' => array(
		'num_colinearity_runs' => (int) 1,
		'num_colinearity_with_dating_runs' => (int) 0,
		'num_functional_clusters_runs' => (int) 6,
		'has_pan_genomes' => false
	),
	'allowed_extra_sequences_types' => array(
		'aa' => 'Protein',
		'dna' => 'DNA'
	),
	'allowed_editing_methods' => array(
		'column' => 'Positions only',
		'row' => 'Genes only',
		'column_row' => 'Positions and Genes',
		'none' => 'No editing'
	),
	'allowed_tree_programs' => array(
		'fasttree' => 'FastTree',
		'iqtree' => 'IQ-TREE (includes model testing)',
		'raxml' => 'RAxML',
		'phyml' => 'PhyML'
	),
	'allowed_msa_programs' => array(
		'muscle' => 'MUSCLE',
		'mafft' => 'MAFFT'
	),
	'allowed_number_blasthits' => array(
		(int) 0 => 'all',
		(int) 1 => (int) 20,
		(int) 2 => (int) 10,
		(int) 3 => (int) 5,
		(int) 4 => (int) 1
	),
	'gf_genes' => array(
		'A01p21830' => 'bna',
		'A01p21840' => 'bna',
		'A01p21850' => 'bna',
		'A01p21860' => 'bna',
		'A01p37700' => 'bna',
		'A03p32640' => 'bna',
		'A03p39860' => 'bna',
		'A03p49260' => 'bna',
		'A03p49270' => 'bna',
		'A03p49290' => 'bna',
		'A04p00520' => 'bna',
		'A06p05920' => 'bna',
		'A08p11880' => 'bna',
		'A08p11890' => 'bna',
		'A08p11920' => 'bna',
		'A08p34820' => 'bna',
		'A09p65600' => 'bna',
		'Aa31LG10G16580' => 'aar',
		'Aa31LG10G6360' => 'aar',
		'Aa31LG10G6370' => 'aar',
		'Aa31LG10G6380' => 'aar',
		'Aa31LG8G3640' => 'aar',
		'Aa31LG8G3650' => 'aar',
		'Aa31sc55G160' => 'aar',
		'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
		'Actinidia00029' => 'ach',
		'Actinidia02602' => 'ach',
		'Actinidia04684' => 'ach',
		'Actinidia04740' => 'ach',
		'Actinidia14181' => 'ach',
		'Actinidia14306' => 'ach',
		'Actinidia15151' => 'ach',
		'Actinidia21059' => 'ach',
		'Actinidia21060' => 'ach',
		'Actinidia23056' => 'ach',
		'Actinidia23653' => 'ach',
		'Actinidia24648' => 'ach',
		'Actinidia25057' => 'ach',
		'Actinidia25058' => 'ach',
		'Actinidia27047' => 'ach',
		'Actinidia28405' => 'ach',
		'Actinidia30608' => 'ach',
		'Actinidia37708' => 'ach',
		'Ah.03g136530' => 'amhyb',
		'Ah.04g160490' => 'amhyb',
		'Ah.06g189650' => 'amhyb',
		'Ah.15g093890' => 'amhyb',
		'AL1G19510' => 'aly',
		'AL3G29330' => 'aly',
		'AL5G45560' => 'aly',
		'AL7G39590' => 'aly',
		'AL7G39600' => 'aly',
		'AL7G39630' => 'aly',
		'AL7G39640' => 'aly',
		'Aqoxy271s002' => 'aox',
		'Aqoxy2G03021' => 'aox',
		'Aqoxy5G02998' => 'aox',
		'AT1G09070' => 'ath',
		'AT2G05105' => 'ath',
		'AT3G16510' => 'ath',
		'AT3G62780' => 'ath',
		'AT4G15740' => 'ath',
		'AT4G15755' => 'ath',
		'ATR0582G345' => 'atr',
		'ATR0706G083' => 'atr',
		'Atru.chr12.1470' => 'acertr',
		'Atru.chr4.2817' => 'acertr',
		'Atru.chr5.1217' => 'acertr',
		'Atru.chr6.2728' => 'acertr',
		'AUR62005181' => 'cqu',
		'AUR62008595' => 'cqu',
		'AUR62018083' => 'cqu',
		'AUR62032535' => 'cqu',
		'AUR62033183' => 'cqu',
		'BcaB02g08098' => 'bca',
		'BcaB04g18311' => 'bca',
		'BcaB04g18316' => 'bca',
		'BcaB04g18317' => 'bca',
		'BcaB04g18904' => 'bca',
		'BcaB07g34125' => 'bca',
		'BcaC01g03815' => 'bca',
		'BcaC01g04512' => 'bca',
		'BcaC02g10312' => 'bca',
		'BcaC02g10313' => 'bca',
		'BcaC05g24761' => 'bca',
		'BcaC05g30259' => 'bca',
		'BcaC06g32954' => 'bca',
		'BcaC06g32955' => 'bca',
		'BcaC06g32956' => 'bca',
		'BcaC06g32957' => 'bca',
		'BcaC06g32958' => 'bca',
		'BcaC06g33429' => 'bca',
		'BcaC06g33430' => 'bca',
		'BcaC06g33452' => 'bca',
		'BcaC06g33453' => 'bca',
		'BcaC07g37912' => 'bca',
		'BcaC07g37913' => 'bca',
		'BcaC07g37927' => 'bca',
		'BcaC07g38479' => 'bca',
		'BcaC07g41905' => 'bca',
		'BcaC07g41906' => 'bca',
		'BcaC09g50264' => 'bca',
		'BcaC09g50266' => 'bca',
		'BcaC09g50267' => 'bca',
		'BcaNung00249' => 'bca',
		'BcaNung00250' => 'bca',
		'BcaNung00251' => 'bca',
		'BolC1t02661H' => 'bol',
		'BolC1t02662H' => 'bol',
		'BolC1t02663H' => 'bol',
		'BolC1t02664H' => 'bol',
		'BolC1t02665H' => 'bol',
		'BolC3t16237H' => 'bol',
		'BolC3t17113H' => 'bol',
		'BolC4t24577H' => 'bol',
		'BolC5t29466H' => 'bol',
		'BolC7t45257H' => 'bol',
		'BolC7t45262H' => 'bol',
		'BolC7t45263H' => 'bol',
		'BolC8t48302H' => 'bol',
		'BolC8t48303H' => 'bol',
		'BolC8t48308H' => 'bol',
		'BolC8t48884H' => 'bol',
		'BolC8t52496H' => 'bol',
		'BraA01t02091Z' => 'bra',
		'BraA01t02092Z' => 'bra',
		'BraA01t02093Z' => 'bra',
		'BraA03t12432Z' => 'bra',
		'BraA03t13134Z' => 'bra',
		'BraA03t14027Z' => 'bra',
		'BraA03t14028Z' => 'bra',
		'BraA03t14029Z' => 'bra',
		'BraA04t15772Z' => 'bra',
		'BraA06t23799Z' => 'bra',
		'BraA08t33179Z' => 'bra',
		'BraA08t33180Z' => 'bra',
		'BraA08t33182Z' => 'bra',
		'BraA08t35393Z' => 'bra',
		'BraA09t41904Z' => 'bra',
		'C01p27150' => 'bna',
		'C01p27160' => 'bna',
		'C01p27170' => 'bna',
		'C01p27180' => 'bna',
		'C03p39730' => 'bna',
		'C03p48330' => 'bna',
		'C04p30430' => 'bna',
		'C05p07110' => 'bna',
		'C07p47340' => 'bna',
		'C07p47350' => 'bna',
		'C07p47360' => 'bna',
		'C08p12440' => 'bna',
		'C08p49670' => 'bna',
		'CAN.G1652.13' => 'can',
		'CAN.G1652.15' => 'can',
		'CAN.G1971.1' => 'can',
		'CAN.G392.2' => 'can',
		'CAN.G903.3' => 'can',
		'CANSAT25G3656' => 'cansat',
		'CANSAT54G1245' => 'cansat',
		'CANSAT56G1399' => 'cansat',
		'CANSAT78G0327' => 'cansat',
		'CANSAT80G2586' => 'cansat',
		'CARHR008960' => 'chi',
		'CARHR054700' => 'chi',
		'CARHR091720' => 'chi',
		'CARHR173050' => 'chi',
		'CARHR180170' => 'chi',
		'CARHR290160' => 'chi',
		'CARHR290180' => 'chi',
		'CARHR290190' => 'chi',
		'CARHR290200' => 'chi',
		'Carub.0001s0839' => 'cru',
		'Carub.0001s3869' => 'cru',
		'Carub.0003s1626' => 'cru',
		'Carub.0005s2943' => 'cru',
		'Carub.0007s2588' => 'cru',
		'Carub.0007s2593' => 'cru',
		'Carub.0007s2594' => 'cru',
		'Carub.0007s2595' => 'cru',
		'Ca_01948_v3' => 'car',
		'Ca_08232_v3' => 'car',
		'Ca_21529_v3' => 'car',
		'Cc00_g10490' => 'ccan',
		'Cc00_g10550' => 'ccan',
		'Cc00_g25620' => 'ccan',
		'Cc10_g10850' => 'ccan',
		'Cc10_g10870' => 'ccan',
		'CDE02G1898' => 'cde',
		'CDE09G0399' => 'cde',
		'Cfa006615' => 'cfa',
		'Cfa006616' => 'cfa',
		'Cfa007138' => 'cfa',
		'Cfa009470' => 'cfa',
		'Cfa015375' => 'cfa',
		'Cfa015377' => 'cfa',
		'Ciclev10001783m.g' => 'ccl',
		'Ciclev10005259m.g' => 'ccl',
		'Ciclev10005548m.g' => 'ccl',
		'Ciclev10017662m.g' => 'ccl',
		'Ciclev10028983m.g' => 'ccl',
		'CiPaw.01G149500' => 'cil',
		'CiPaw.02G000100' => 'cil',
		'CiPaw.02G083700' => 'cil',
		'CiPaw.05G098600' => 'cil',
		'CiPaw.07G020300' => 'cil',
		'CiPaw.08G101400' => 'cil',
		'CiPaw.08G162900' => 'cil',
		'ClCG02G015510' => 'cla',
		'ClCG02G015520' => 'cla',
		'ClCG03G017040' => 'cla',
		'ClCG06G005200' => 'cla',
		'COL.COLO4_06613' => 'col',
		'COL.COLO4_10495' => 'col',
		'COL.COLO4_13890' => 'col',
		'COL.COLO4_23398' => 'col',
		'COL.COLO4_34625' => 'col',
		'COL.COLO4_35226' => 'col',
		'Cpa.g.sc16.163' => 'cpa',
		'Cpa.g.sc48.80' => 'cpa',
		'Cpa.g.sc70.37' => 'cpa',
		'CsaV3_1G038880' => 'csa',
		'CsaV3_2G006560' => 'csa',
		'CsaV3_2G006570' => 'csa',
		'CsaV3_3G014550' => 'csa',
		'CsaV3_6G017230' => 'csa',
		'CSS0011101' => 'camsi',
		'CSS0023807' => 'camsi',
		'CSS0024986' => 'camsi',
		'CSS0025346' => 'camsi',
		'CSS0039085' => 'camsi',
		'DCAR_009673' => 'dca',
		'DCAR_014116' => 'dca',
		'DCAR_022152' => 'dca',
		'DCAR_022155' => 'dca',
		'DCAR_024563' => 'dca',
		'DCAR_027081' => 'dca',
		'DCAR_030533' => 'dca',
		'Dinv07906' => 'din',
		'Dinv07912' => 'din',
		'Dinv27360' => 'din',
		'Dinv27362' => 'din',
		'Dinv27363' => 'din',
		'Dinv27365' => 'din',
		'Dinv27366' => 'din',
		'Dinv27367' => 'din',
		'Dinv27368' => 'din',
		'Dinv27369' => 'din',
		'Dinv29770' => 'din',
		'Dinv30152' => 'din',
		'Dinv30153' => 'din',
		'Dinv30790' => 'din',
		'Dinv30793' => 'din',
		'Dinv44389' => 'din',
		'Duzib052G0438' => 'dzi',
		'Duzib147G1335' => 'dzi',
		'Duzib151G1190' => 'dzi',
		'Duzib177G0415' => 'dzi',
		'Duzib187G0555' => 'dzi',
		'Duzib212G0059' => 'dzi',
		'ECA232G1931' => 'eca',
		'ECA233G2183' => 'eca',
		'ECA233G4973' => 'eca',
		'ECA233G5406' => 'eca',
		'ECA236G0710' => 'eca',
		'ECA240G0693' => 'eca',
		'ECA246G0531' => 'eca',
		'EL10Ac3g06587' => 'bvu',
		'EL10Ac4g09375' => 'bvu',
		'EL10Ac6g13906' => 'bvu',
		'EL10Ac7g17489' => 'bvu',
		'Eucgr.B01852' => 'egr',
		'Eucgr.B01929' => 'egr',
		'Eucgr.B01930' => 'egr',
		'Eucgr.G02756' => 'egr',
		'Eucgr.G02880' => 'egr',
		'Eucgr.G02885' => 'egr',
		'Eucgr.H03902' => 'egr',
		'Eucgr.I01570' => 'egr',
		'Eucgr.J01654' => 'egr',
		'Eucgr.J01655' => 'egr',
		'Eucgr.J01656' => 'egr',
		'Eucgr.J01658' => 'egr',
		'Eucgr.L00238' => 'egr',
		'Eucgr.L00247' => 'egr',
		'Eucgr.L02128' => 'egr',
		'FAN04G1523' => 'fan',
		'FAN05G0203' => 'fan',
		'FAN05G2988' => 'fan',
		'FAN06G3973' => 'fan',
		'FAN09G1327' => 'fan',
		'FAN11G1495' => 'fan',
		'FAN12G1524' => 'fan',
		'FAN12G1752' => 'fan',
		'FAN12G3320' => 'fan',
		'FAN12G3989' => 'fan',
		'FAN12G4021' => 'fan',
		'FAN14G4907' => 'fan',
		'FAN15G0232' => 'fan',
		'FAN17G0945' => 'fan',
		'FAN17G2096' => 'fan',
		'FAN19G2234' => 'fan',
		'FAN21G2915' => 'fan',
		'FAN22G2127' => 'fan',
		'FAN22G2168' => 'fan',
		'FAN22G2263' => 'fan',
		'FAN26G0033' => 'fan',
		'FAN26G2250' => 'fan',
		'FvH4_4g17880' => 'fve',
		'FvH4_4g17890' => 'fve',
		'FvH4_4g22200' => 'fve',
		'FvH4_4g32111' => 'fve',
		'FvH4_6g06320' => 'fve',
		'FvH4_6g06321' => 'fve',
		'Glyma.07G248600' => 'gma',
		'Glyma.09G045700' => 'gma',
		'Glyma.15G152900' => 'gma',
		'Glyma.16G045500' => 'gma',
		'Gohir.1Z049522' => 'ghi',
		'Gohir.A02G140000' => 'ghi',
		'Gohir.A05G376200' => 'ghi',
		'Gohir.A09G239900' => 'ghi',
		'Gohir.A11G266500' => 'ghi',
		'Gohir.A11G295000' => 'ghi',
		'Gohir.A12G009950' => 'ghi',
		'Gohir.D03G050400' => 'ghi',
		'Gohir.D09G240700' => 'ghi',
		'Gohir.D11G276800' => 'ghi',
		'Gohir.D11G309700' => 'ghi',
		'Gohir.D11G309750' => 'ghi',
		'Gohir.D11G309800' => 'ghi',
		'Gohir.D12G010000' => 'ghi',
		'Gorai.003G052000' => 'gra',
		'Gorai.006G263800' => 'gra',
		'Gorai.007G298900' => 'gra',
		'Gorai.007G341700' => 'gra',
		'Gorai.007G341800' => 'gra',
		'Gorai.007G341900' => 'gra',
		'Gorai.008G010000' => 'gra',
		'Gorai.012G044800' => 'gra',
		'GSVIVG01031119001' => 'vvi',
		'GSVIVG01037484001' => 'vvi',
		'HanXRQChr01g0027051' => 'han',
		'HanXRQChr01g0027071' => 'han',
		'HanXRQChr03g0060971' => 'han',
		'HanXRQChr03g0080791' => 'han',
		'HanXRQChr03g0080801' => 'han',
		'HanXRQChr03g0080821' => 'han',
		'HanXRQChr04g0122401' => 'han',
		'HanXRQChr05g0161071' => 'han',
		'HanXRQChr08g0212211' => 'han',
		'HanXRQChr08g0212221' => 'han',
		'HanXRQChr08g0212611' => 'han',
		'HanXRQChr08g0232501' => 'han',
		'HanXRQChr12g0364471' => 'han',
		'HanXRQChr13g0411371' => 'han',
		'HanXRQChr15g0486451' => 'han',
		'HanXRQChr17g0566961' => 'han',
		'Haze_01218' => 'cav',
		'Haze_04158' => 'cav',
		'Haze_04160' => 'cav',
		'Haze_14985' => 'cav',
		'Hma1.2p1_0009F.1_g006150' => 'hma',
		'Hma1.2p1_0009F.1_g006160' => 'hma',
		'Hma1.2p1_0009F.1_g006170' => 'hma',
		'Hma1.2p1_0402F.1_g145130' => 'hma',
		'Hma1.2p1_0491F.1_g164370' => 'hma',
		'Hma1.2p1_0738F.1_g210930' => 'hma',
		'Hma1.2p1_1374F.1_g278900' => 'hma',
		'Hma1.2p1_1374F.1_g278910' => 'hma',
		'HPP92_001320' => 'vpl',
		'HPP92_024383' => 'vpl',
		'HPP92_026256' => 'vpl',
		'Lalb_Chr15g0083531' => 'lal',
		'Lalb_Chr18g0051731' => 'lal',
		'Lalb_Chr24g0402961' => 'lal',
		'Lj1g0006851' => 'lja',
		'Lj3P816T16' => 'lonja',
		'Lj3P818T23' => 'lonja',
		'Lj4g0012125' => 'lja',
		'Lj6g0011988' => 'lja',
		'Lj6P674T15' => 'lonja',
		'Lj7A312G17' => 'lonja',
		'Lj7A317T45' => 'lonja',
		'Lj7A328T34' => 'lonja',
		'Lj7C313T0' => 'lonja',
		'Lj7C325T0' => 'lonja',
		'Lj7C325T2' => 'lonja',
		'Lj7C325T4' => 'lonja',
		'Lj7C326G12' => 'lonja',
		'Lj7C326T3' => 'lonja',
		'Lj7P312T3' => 'lonja',
		'Lj7P312T6' => 'lonja',
		'Lj7P313T4' => 'lonja',
		'Lj7P314T10' => 'lonja',
		'Lj7P315T11' => 'lonja',
		'Lj7P315T14' => 'lonja',
		'Lj7P315T8' => 'lonja',
		'Lj7P316T4' => 'lonja',
		'Lj7P324T10' => 'lonja',
		'Lj7P324T13' => 'lonja',
		'Lj7P325T13' => 'lonja',
		'Lj7P325T16' => 'lonja',
		'Lj7P326T14' => 'lonja',
		'Lj7P326T15' => 'lonja',
		'Lj7P326T18' => 'lonja',
		'Lj7P326T21' => 'lonja',
		'Lj7P326T27' => 'lonja',
		'Lj7P327T2' => 'lonja',
		'Lj7P327T5' => 'lonja',
		'Lsat_1_v5_gn_2_72960' => 'lsa',
		'Lsat_1_v5_gn_5_53581' => 'lsa',
		'Lsat_1_v5_gn_6_15121' => 'lsa',
		'Lsat_1_v5_gn_6_96660' => 'lsa',
		'Lsat_1_v5_gn_8_103180' => 'lsa',
		'Lsat_1_v5_gn_8_150161' => 'lsa',
		'Lsat_1_v5_gn_9_75640' => 'lsa',
		'Manes.04G097000' => 'mes',
		'Manes.08G099500' => 'mes',
		'Manes.08G119200' => 'mes',
		'Manes.11G073400' => 'mes',
		'Manes.15G013300' => 'mes',
		'MBI18_g14077_MAGBIO' => 'mbi',
		'MBI18_g14618_MAGBIO' => 'mbi',
		'MBI18_g37256_MAGBIO' => 'mbi',
		'MBI19_g00436_MAGBIO' => 'mbi',
		'MBI19_g13126_MAGBIO' => 'mbi',
		'MD02G1019900' => 'mdo',
		'MD04G1202300' => 'mdo',
		'MD12G1216300' => 'mdo',
		'MD13G1133900' => 'mdo',
		'MD13G1169700' => 'mdo',
		'MD13G1169800' => 'mdo',
		'MD16G1144500' => 'mdo',
		'MD16G1170900' => 'mdo',
		'MD17G1004000' => 'mdo',
		'Medtr2g033730' => 'mtr',
		'Medtr2g036000' => 'mtr',
		'Medtr2g036030' => 'mtr',
		'Medtr2g436900' => 'mtr',
		'Medtr4g119780' => 'mtr',
		'Medtr7g084680' => 'mtr',
		'MELO3C004229.2' => 'cme',
		'MELO3C006656.2' => 'cme',
		'MELO3C015314.2' => 'cme',
		'MELO3C021335.2' => 'cme',
		'MELO3C021336.2' => 'cme',
		'MELO3C021341.2' => 'cme',
		'Migut.B01030' => 'egut',
		'Migut.C01169' => 'egut',
		'Migut.C01170' => 'egut',
		'Migut.G00172' => 'egut',
		'Migut.N00094' => 'egut',
		'Migut.N03304' => 'egut',
		'Migut.N03305' => 'egut',
		'Migut.N03306' => 'egut',
		'Migut.N03308' => 'egut',
		'Migut.N03309' => 'egut',
		'Migut.N03310' => 'egut',
		'Migut.N03311' => 'egut',
		'MSTRG.1475' => 'ama',
		'MSTRG.22871' => 'ama',
		'Nitab4.5_0000051g0380' => 'nta',
		'Nitab4.5_0000191g0040' => 'nta',
		'Nitab4.5_0000494g0060' => 'nta',
		'Nitab4.5_0000960g0190' => 'nta',
		'Nitab4.5_0002344g0050' => 'nta',
		'Nitab4.5_0002344g0080' => 'nta',
		'Nitab4.5_0002420g0010' => 'nta',
		'Nitab4.5_0009303g0020' => 'nta',
		'Nitab4.5_0011450g0010' => 'nta',
		'Nitab4.5_0014335g0010' => 'nta',
		'Nn1g00545' => 'nnu',
		'Nn2g15293' => 'nnu',
		'Nn2g15294' => 'nnu',
		'Nn3g19708' => 'nnu',
		'Nn3g21412' => 'nnu',
		'Nn3g21413' => 'nnu',
		'Nn4g22075' => 'nnu',
		'Nn4g25895' => 'nnu',
		'Nn4g25897' => 'nnu',
		'Nn4g25898' => 'nnu',
		'Nn5g28013' => 'nnu',
		'Nn6g35455' => 'nnu',
		'Nn7g36920' => 'nnu',
		'Oeu017725.1' => 'oeu',
		'Oeu017726.1' => 'oeu',
		'Oeu024979.1' => 'oeu',
		'Oeu030038.1' => 'oeu',
		'Oeu030040.1' => 'oeu',
		'Oeu030041.1' => 'oeu',
		'Oeu040760.1' => 'oeu',
		'Oeu047927.1' => 'oeu',
		'Oeu050888.1' => 'oeu',
		'Oeu051839.1' => 'oeu',
		'Oeu058950.1' => 'oeu',
		'Oeu063347.1' => 'oeu',
		'Oeu063348.1' => 'oeu',
		'Os01g0369500' => 'osa',
		'Os01g0934100' => 'osa',
		'Os02g0518000' => 'osa',
		'Os05g0149100' => 'osa',
		'Os05g0370300' => 'osa',
		'Os07g0670200' => 'osa',
		'Os07g0670300' => 'osa',
		'Peaxi162Scf00014g00108' => 'pax',
		'Peaxi162Scf00014g00113' => 'pax',
		'Peaxi162Scf00014g00122' => 'pax',
		'Peaxi162Scf00028g00117' => 'pax',
		'Peaxi162Scf00037g00096' => 'pax',
		'Peaxi162Scf00037g00099' => 'pax',
		'Peaxi162Scf00071g00066' => 'pax',
		'Peaxi162Scf00488g00063' => 'pax',
		'Peaxi162Scf00534g00013' => 'pax',
		'Peaxi162Scf00849g00012' => 'pax',
		'PGR004G0121' => 'pgr',
		'PGR083G0395' => 'pgr',
		'PGR102G0313' => 'pgr',
		'PGR142G1530' => 'pgr',
		'PGSC0003DMG400004506' => 'stu',
		'PGSC0003DMG400024703' => 'stu',
		'PGSC0003DMG400024747' => 'stu',
		'PGSC0003DMG400029026' => 'stu',
		'Phvul.001G098700' => 'pvu',
		'Phvul.003G104400' => 'pvu',
		'Phvul.009G247100' => 'pvu',
		'Potri.001G070400' => 'ptr',
		'Potri.003G160400' => 'ptr',
		'Potri.005G026650' => 'ptr',
		'Potri.005G026700' => 'ptr',
		'Potri.008G209800' => 'ptr',
		'Potri.010G024200' => 'ptr',
		'Potri.013G018600' => 'ptr',
		'Potri.013G107175' => 'ptr',
		'Pp3c18_18670' => 'ppa',
		'Prupe.1G138000' => 'ppe',
		'Prupe.1G211700' => 'ppe',
		'Prupe.3G315200' => 'ppe',
		'Prupe.6G322500' => 'ppe',
		'Prupe.6G322600' => 'ppe',
		'Psat1g152800' => 'psa',
		'Psat3g092760' => 'psa',
		'Psat4g027040' => 'psa',
		'Psat4g027080' => 'psa',
		'PSO017G3240' => 'pso',
		'PSO478G4973' => 'pso',
		'PSO591G0270' => 'pso',
		'PSO675G0756' => 'pso',
		'PSO832G1537' => 'pso',
		'QL02p068256' => 'qlo',
		'QL02p068300' => 'qlo',
		'QL03p012524' => 'qlo',
		'QL03p012685' => 'qlo',
		'QL03p021168' => 'qlo',
		'QL03p021174' => 'qlo',
		'QL03p021194' => 'qlo',
		'QL03p021409' => 'qlo',
		'QL03p021415' => 'qlo',
		'QL03p021474' => 'qlo',
		'QL03p021480' => 'qlo',
		'QL03p021515' => 'qlo',
		'QL03p021556' => 'qlo',
		'QL03p021573' => 'qlo',
		'QL03p021805' => 'qlo',
		'QL03p027191' => 'qlo',
		'QL03p027328' => 'qlo',
		'QL03p048365' => 'qlo',
		'QL04p026382' => 'qlo',
		'QL04p026428' => 'qlo',
		'QL06p008669' => 'qlo',
		'QL11p050466' => 'qlo',
		'QL11p051131' => 'qlo',
		'QL12p026729' => 'qlo',
		'QL12p030197' => 'qlo',
		'QL12p030209' => 'qlo',
		'RcHm_v2.0_Chr3g0455361' => 'rch',
		'RcHm_v2.0_Chr3g0455371' => 'rch',
		'RcHm_v2.0_Chr4g0422011' => 'rch',
		'RcHm_v2.0_Chr4g0428431' => 'rch',
		'Rhsim02G0009600' => 'rsi',
		'Rhsim02G0009800' => 'rsi',
		'Rhsim02G0010600' => 'rsi',
		'Rhsim02G0010700' => 'rsi',
		'Rhsim02G0010900' => 'rsi',
		'Rhsim05G0141500' => 'rsi',
		'Rhsim07G0186400' => 'rsi',
		'Rhsim07G0186500' => 'rsi',
		'Rhsim11G0066200' => 'rsi',
		'Sabra03G0116600' => 'sbr',
		'Sabra05G0032000' => 'sbr',
		'Sabra13G0092400' => 'sbr',
		'SalBow2G1137' => 'sbo',
		'SalBow5G3436' => 'sbo',
		'SalBow6G3095' => 'sbo',
		'SalBow7G0931' => 'sbo',
		'SalBow7G1104' => 'sbo',
		'SalBow7G1310' => 'sbo',
		'SalBow7G1372' => 'sbo',
		'SalBow7G1730' => 'sbo',
		'SalBow7G2794' => 'sbo',
		'SalBow7G3084' => 'sbo',
		'SalBow7G3275' => 'sbo',
		'SalBow7G3635' => 'sbo',
		'Sc09g0003020' => 'sci',
		'Sc09g0007740' => 'sci',
		'Sc13g0003500' => 'sci',
		'Sc17g0003320' => 'sci',
		'Sc19g0005110' => 'sci',
		'Sed0006577' => 'sed',
		'Sed0007020' => 'sed',
		'Sed0013663' => 'sed',
		'Sed0014054' => 'sed',
		'Sed0014258' => 'sed',
		'Sed0020392' => 'sed',
		'SEGI_10261' => 'sgi',
		'SEGI_20084' => 'sgi',
		'SGA_v2.0_scaffold172G38976' => 'sas',
		'SGA_v2.0_scaffold25G11102' => 'sas',
		'SGA_v2.0_scaffold52G19000' => 'sas',
		'SGA_v2.0_scaffold67G22660' => 'sas',
		'SGA_v2.0_scaffold91G27990' => 'sas',
		'SHI18112' => 'shi',
		'Solyc01g099370.3' => 'sly',
		'Solyc08g028990.1' => 'sly',
		'Solyc11g013250.1' => 'sly',
		'Sopen01g042930' => 'spe',
		'Sopen01g042950' => 'spe',
		'Sopen08g009720' => 'spe',
		'Sopen11g008270' => 'spe',
		'Sp1g07670' => 'spa',
		'Sp3g14860' => 'spa',
		'Sp5g00740' => 'spa',
		'Sp7g14000' => 'spa',
		'Sp7g14010' => 'spa',
		'Sp7g14020' => 'spa',
		'Sp7g14030' => 'spa',
		'Sp7g14040' => 'spa',
		'Sp7g14060' => 'spa',
		'Sp7g14070' => 'spa',
		'Sp7g14080' => 'spa',
		'SpUn0665_0010' => 'spa',
		'TAR362G0271' => 'tar',
		'TAR622G0532' => 'tar',
		'TAR633G1600' => 'tar',
		'TAR636G2581' => 'tar',
		'THA.LOC104803088' => 'tha',
		'THA.LOC104805887' => 'tha',
		'THA.LOC104817502' => 'tha',
		'THA.LOC104820253' => 'tha',
		'THA.LOC104820822' => 'tha',
		'Thecc.01G239900' => 'tca',
		'Thecc.01G295100' => 'tca',
		'Thecc.04G051400' => 'tca',
		'Thecc.04G283200' => 'tca',
		'Thecc.05G311200' => 'tca',
		'Thhalv10006364m.g' => 'esa',
		'Thhalv10008221m.g' => 'esa',
		'Thhalv10021044m.g' => 'esa',
		'Thhalv10024954m.g' => 'esa',
		'Thhalv10025151m.g' => 'esa',
		'Thhalv10026748m.g' => 'esa',
		'Thhalv10026840m.g' => 'esa',
		'Thhalv10026991m.g' => 'esa',
		'Thhalv10026994m.g' => 'esa',
		'Thhalv10027084m.g' => 'esa',
		'Thhalv10027514m.g' => 'esa',
		'TPR.G26844' => 'tpr',
		'TPR.G31662' => 'tpr',
		'TPR.G3220' => 'tpr',
		'TWI12G0020' => 'twi',
		'TWI12G0843' => 'twi',
		'TWI12G0999' => 'twi',
		'TWI18G1208' => 'twi',
		'TWI36G0990' => 'twi',
		'TWI60G0277' => 'twi',
		'unitig_32.g11874' => 'ugi',
		'unitig_52.g17111' => 'ugi',
		'unitig_699.g19675' => 'ugi',
		'vmacro15239' => 'vma',
		'vmacro15240' => 'vma',
		'vmacro15241' => 'vma',
		'VMungo1215G3134' => 'vmu',
		'VMungo1309G0029' => 'vmu',
		'VMungo1383G1384' => 'vmu',
		'Zm00001eb089100' => 'zma',
		'Zm00001eb131850' => 'zma',
		'Zm00001eb142200' => 'zma',
		'Zm00001eb146140' => 'zma',
		'Zm00001eb154920' => 'zma',
		'Zm00001eb197960' => 'zma',
		'Zm00001eb285340' => 'zma',
		'Zm00001eb330300' => 'zma',
		'Zm00001eb363490' => 'zma'
	),
	'gf_id' => 'HOM05D000865',
	'gf_types_information' => array(
		'HOMFAM' => array(
			'id' => 'HOMFAM',
			'name' => 'Homologous gene family',
			'gene_type' => 'coding',
			'parent_id' => '',
			'ancestry' => 'homology'
		),
		'ORTHOFAM' => array(
			'id' => 'ORTHOFAM',
			'name' => 'Orthologous gene family',
			'gene_type' => 'coding',
			'parent_id' => 'HOMFAM',
			'ancestry' => 'orthology'
		)
	),
	'gf_types_configuration' => array(
		'HOMFAM' => array(
			'order' => '1',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		),
		'ORTHOFAM' => array(
			'order' => '2',
			'show_parentless_subfamilies' => 'false',
			'show_table' => 'true',
			'show_orphan' => false
		)
	),
	'all_species' => array(
		'acertr' => array(
			'species' => 'acertr',
			'common_name' => 'Acer truncatum',
			'tax_id' => '47965',
			'version' => 'v2.0'
		),
		'ach' => array(
			'species' => 'ach',
			'common_name' => 'Actinidia chinensis',
			'tax_id' => '3625',
			'version' => 'V3.0'
		),
		'aar' => array(
			'species' => 'aar',
			'common_name' => 'Aethionema arabicum',
			'tax_id' => '228871',
			'version' => 'v3.1'
		),
		'amhyb' => array(
			'species' => 'amhyb',
			'common_name' => 'Amaranthus hybridus',
			'tax_id' => '3565',
			'version' => 'v1.0'
		),
		'atr' => array(
			'species' => 'atr',
			'common_name' => 'Amborella trichopoda',
			'tax_id' => '13333',
			'version' => 'JGI v1.0'
		),
		'aag' => array(
			'species' => 'aag',
			'common_name' => 'Anthoceros agrestis',
			'tax_id' => '41834',
			'version' => 'v1.1'
		),
		'aox' => array(
			'species' => 'aox',
			'common_name' => 'Aquilegia oxysepala',
			'tax_id' => '432649',
			'version' => 'v1.0'
		),
		'aly' => array(
			'species' => 'aly',
			'common_name' => 'Arabidopsis lyrata',
			'tax_id' => '59689',
			'version' => 'JGI v2.1'
		),
		'ath' => array(
			'species' => 'ath',
			'common_name' => 'Arabidopsis thaliana',
			'tax_id' => '3702',
			'version' => 'Araport11'
		),
		'arhy' => array(
			'species' => 'arhy',
			'common_name' => 'Arachis hypogaea',
			'tax_id' => '3818',
			'version' => 'v1.0'
		),
		'ama' => array(
			'species' => 'ama',
			'common_name' => 'Avicennia marina',
			'tax_id' => '82927',
			'version' => 'v1.1 20200527'
		),
		'bvu' => array(
			'species' => 'bvu',
			'common_name' => 'Beta vulgaris',
			'tax_id' => '161934',
			'version' => 'EL10_1.0'
		),
		'bca' => array(
			'species' => 'bca',
			'common_name' => 'Brassica carinata',
			'tax_id' => '52824',
			'version' => 'V1.0'
		),
		'bna' => array(
			'species' => 'bna',
			'common_name' => 'Brassica napus',
			'tax_id' => '3708',
			'version' => 'v2.0'
		),
		'bol' => array(
			'species' => 'bol',
			'common_name' => 'Brassica oleracea',
			'tax_id' => '109376',
			'version' => 'v1.0'
		),
		'bra' => array(
			'species' => 'bra',
			'common_name' => 'Brassica rapa',
			'tax_id' => '3711',
			'version' => 'v1.0'
		),
		'camsi' => array(
			'species' => 'camsi',
			'common_name' => 'Camellia sinensis var. sinensis',
			'tax_id' => '542762',
			'version' => 'CSS_ChrLev_20200506'
		),
		'cansat' => array(
			'species' => 'cansat',
			'common_name' => 'Cannabis sativa',
			'tax_id' => '3483',
			'version' => 'cs10'
		),
		'cru' => array(
			'species' => 'cru',
			'common_name' => 'Capsella rubella',
			'tax_id' => '81985',
			'version' => 'JGI v1.1'
		),
		'can' => array(
			'species' => 'can',
			'common_name' => 'Capsicum annuum',
			'tax_id' => '4072',
			'version' => 'Pepper Genome v2.0'
		),
		'chi' => array(
			'species' => 'chi',
			'common_name' => 'Cardamine hirsuta',
			'tax_id' => '50463',
			'version' => 'v1.0'
		),
		'cpa' => array(
			'species' => 'cpa',
			'common_name' => 'Carica papaya',
			'tax_id' => '3649',
			'version' => 'JGI ASGPB0.4'
		),
		'cfa' => array(
			'species' => 'cfa',
			'common_name' => 'Carpinus fangiana',
			'tax_id' => '176857',
			'version' => 'v1.0'
		),
		'cil' => array(
			'species' => 'cil',
			'common_name' => 'Carya illinoinensis',
			'tax_id' => '32201',
			'version' => 'v1.1'
		),
		'cde' => array(
			'species' => 'cde',
			'common_name' => 'Ceratophyllum demersum',
			'tax_id' => '4428',
			'version' => 'v1.0'
		),
		'cbr' => array(
			'species' => 'cbr',
			'common_name' => 'Chara braunii',
			'tax_id' => '69332',
			'version' => 'Cbr1.0'
		),
		'cqu' => array(
			'species' => 'cqu',
			'common_name' => 'Chenopodium quinoa',
			'tax_id' => '63459',
			'version' => 'KAUST v1.0'
		),
		'cre' => array(
			'species' => 'cre',
			'common_name' => 'Chlamydomonas reinhardtii',
			'tax_id' => '3055',
			'version' => 'JGI v5.5'
		),
		'car' => array(
			'species' => 'car',
			'common_name' => 'Cicer arietinum L.',
			'tax_id' => '3827',
			'version' => 'v3.0'
		),
		'cla' => array(
			'species' => 'cla',
			'common_name' => 'Citrullus lanatus',
			'tax_id' => '3654',
			'version' => 'WCG v2.0'
		),
		'ccl' => array(
			'species' => 'ccl',
			'common_name' => 'Citrus clementina',
			'tax_id' => '85681',
			'version' => 'JGI v1.0'
		),
		'ccan' => array(
			'species' => 'ccan',
			'common_name' => 'Coffea canephora',
			'tax_id' => '49390',
			'version' => 'Coffee Genome Hub v1'
		),
		'col' => array(
			'species' => 'col',
			'common_name' => 'Corchorus olitorius',
			'tax_id' => '93759',
			'version' => 'GenBank v1.0'
		),
		'cav' => array(
			'species' => 'cav',
			'common_name' => 'Corylus avellana',
			'tax_id' => '13451',
			'version' => 'v1.0'
		),
		'cme' => array(
			'species' => 'cme',
			'common_name' => 'Cucumis melo',
			'tax_id' => '3656',
			'version' => 'Melonomics v3.6.1'
		),
		'csa' => array(
			'species' => 'csa',
			'common_name' => 'Cucumis sativus L.',
			'tax_id' => '3659',
			'version' => 'v3.0'
		),
		'dca' => array(
			'species' => 'dca',
			'common_name' => 'Daucus carota',
			'tax_id' => '4039',
			'version' => 'JGI v2.0'
		),
		'din' => array(
			'species' => 'din',
			'common_name' => 'Davidia involucrata',
			'tax_id' => '16924',
			'version' => 'v1.0'
		),
		'dzi' => array(
			'species' => 'dzi',
			'common_name' => 'Durio zibethinus',
			'tax_id' => '66656',
			'version' => 'Duzib1.0'
		),
		'eca' => array(
			'species' => 'eca',
			'common_name' => 'Erigeron canadensis',
			'tax_id' => '72917',
			'version' => 'V1.0'
		),
		'egut' => array(
			'species' => 'egut',
			'common_name' => 'Erythranthe guttata',
			'tax_id' => '4155',
			'version' => 'v2.0'
		),
		'egr' => array(
			'species' => 'egr',
			'common_name' => 'Eucalyptus grandis',
			'tax_id' => '71139',
			'version' => 'v2.0'
		),
		'esa' => array(
			'species' => 'esa',
			'common_name' => 'Eutrema salsugineum',
			'tax_id' => '72664',
			'version' => 'v1.0'
		),
		'fve' => array(
			'species' => 'fve',
			'common_name' => 'Fragaria vesca',
			'tax_id' => '57918',
			'version' => 'V4.0.a2'
		),
		'fan' => array(
			'species' => 'fan',
			'common_name' => 'Fragaria x ananassa',
			'tax_id' => '3747',
			'version' => 'V1.0.a1'
		),
		'gma' => array(
			'species' => 'gma',
			'common_name' => 'Glycine max',
			'tax_id' => '3847',
			'version' => 'JGI Wm82.a4.v1'
		),
		'ghi' => array(
			'species' => 'ghi',
			'common_name' => 'Gossypium hirsutum',
			'tax_id' => '3635',
			'version' => 'v2.1'
		),
		'gra' => array(
			'species' => 'gra',
			'common_name' => 'Gossypium raimondii',
			'tax_id' => '29730',
			'version' => 'v2.1'
		),
		'han' => array(
			'species' => 'han',
			'common_name' => 'Helianthus annuus',
			'tax_id' => '4232',
			'version' => 'r1.2'
		),
		'hma' => array(
			'species' => 'hma',
			'common_name' => 'Hydrangea macrophylla',
			'tax_id' => '23110',
			'version' => 'v2.1'
		),
		'lsa' => array(
			'species' => 'lsa',
			'common_name' => 'Lactuca sativa',
			'tax_id' => '4236',
			'version' => 'v8.0'
		),
		'lonja' => array(
			'species' => 'lonja',
			'common_name' => 'Lonicera japonica',
			'tax_id' => '105884',
			'version' => 'v1.0'
		),
		'lja' => array(
			'species' => 'lja',
			'common_name' => 'Lotus japonicus',
			'tax_id' => '34305',
			'version' => 'Lj1.0v1'
		),
		'lal' => array(
			'species' => 'lal',
			'common_name' => 'Lupinus albus',
			'tax_id' => '3870',
			'version' => 'v1.0'
		),
		'mbi' => array(
			'species' => 'mbi',
			'common_name' => 'Magnolia biondii',
			'tax_id' => '86725',
			'version' => 'v1.0'
		),
		'mdo' => array(
			'species' => 'mdo',
			'common_name' => 'Malus domestica',
			'tax_id' => '3750',
			'version' => 'GDDH13 v1.1'
		),
		'mes' => array(
			'species' => 'mes',
			'common_name' => 'Manihot esculenta',
			'tax_id' => '3983',
			'version' => 'v8.1'
		),
		'mpo' => array(
			'species' => 'mpo',
			'common_name' => 'Marchantia polymorpha',
			'tax_id' => '3197',
			'version' => 'JGI v3.1'
		),
		'mtr' => array(
			'species' => 'mtr',
			'common_name' => 'Medicago truncatula',
			'tax_id' => '3880',
			'version' => 'JGI Mt4.0v1'
		),
		'mco' => array(
			'species' => 'mco',
			'common_name' => 'Micromonas commoda',
			'tax_id' => '296587',
			'version' => 'JGI v3.0'
		),
		'nnu' => array(
			'species' => 'nnu',
			'common_name' => 'Nelumbo nucifera',
			'tax_id' => '4432',
			'version' => 'v2.0'
		),
		'nta' => array(
			'species' => 'nta',
			'common_name' => 'Nicotiana tabacum',
			'tax_id' => '4097',
			'version' => 'Edwards2017'
		),
		'oeu' => array(
			'species' => 'oeu',
			'common_name' => 'Olea europaea',
			'tax_id' => '4146',
			'version' => 'v1.0'
		),
		'osa' => array(
			'species' => 'osa',
			'common_name' => 'Oryza sativa ssp. japonica',
			'tax_id' => '39947',
			'version' => 'IRGSP-1.0-2021-05-10'
		),
		'pso' => array(
			'species' => 'pso',
			'common_name' => 'Papaver somniferum',
			'tax_id' => '3469',
			'version' => 'ASM357369v1'
		),
		'pax' => array(
			'species' => 'pax',
			'common_name' => 'Petunia axillaris',
			'tax_id' => '33119',
			'version' => 'Sol Genomics v1.6.2'
		),
		'pvu' => array(
			'species' => 'pvu',
			'common_name' => 'Phaseolus vulgaris',
			'tax_id' => '3885',
			'version' => 'v2.1'
		),
		'ppa' => array(
			'species' => 'ppa',
			'common_name' => 'Physcomitrium patens',
			'tax_id' => '3218',
			'version' => 'JGI v3.3'
		),
		'psa' => array(
			'species' => 'psa',
			'common_name' => 'Pisum sativum',
			'tax_id' => '3888',
			'version' => 'V1.0a'
		),
		'ptr' => array(
			'species' => 'ptr',
			'common_name' => 'Populus trichocarpa',
			'tax_id' => '3694',
			'version' => 'JGI v4.1'
		),
		'pco' => array(
			'species' => 'pco',
			'common_name' => 'Prasinoderma coloniale',
			'tax_id' => '156133',
			'version' => 'v1.0'
		),
		'ppe' => array(
			'species' => 'ppe',
			'common_name' => 'Prunus persica',
			'tax_id' => '3760',
			'version' => 'v2.1'
		),
		'pgr' => array(
			'species' => 'pgr',
			'common_name' => 'Punica granatum',
			'tax_id' => '22663',
			'version' => 'ASM765513v2'
		),
		'qlo' => array(
			'species' => 'qlo',
			'common_name' => 'Quercus lobata',
			'tax_id' => '97700',
			'version' => 'v3.0'
		),
		'rsi' => array(
			'species' => 'rsi',
			'common_name' => 'Rhododendron simsii',
			'tax_id' => '118357',
			'version' => 'v1.0'
		),
		'rch' => array(
			'species' => 'rch',
			'common_name' => 'Rosa chinensis',
			'tax_id' => '74649',
			'version' => 'v2.0'
		),
		'sbr' => array(
			'species' => 'sbr',
			'common_name' => 'Salix brachista',
			'tax_id' => '2182728',
			'version' => 'v1.0'
		),
		'sbo' => array(
			'species' => 'sbo',
			'common_name' => 'Salvia bowleyana',
			'tax_id' => '424416',
			'version' => 'v1.0'
		),
		'shi' => array(
			'species' => 'shi',
			'common_name' => 'Sapria himalayana',
			'tax_id' => '289637',
			'version' => 'v1.0'
		),
		'spa' => array(
			'species' => 'spa',
			'common_name' => 'Schrenkiella parvula',
			'tax_id' => '98039',
			'version' => 'v2.2'
		),
		'sed' => array(
			'species' => 'sed',
			'common_name' => 'Sechium edule',
			'tax_id' => '184140',
			'version' => 'v1.0'
		),
		'smo' => array(
			'species' => 'smo',
			'common_name' => 'Selaginella moellendorffii',
			'tax_id' => '88036',
			'version' => 'v1.0'
		),
		'sun' => array(
			'species' => 'sun',
			'common_name' => 'Selenicereus undatus',
			'tax_id' => '176265',
			'version' => 'v1.0'
		),
		'sgi' => array(
			'species' => 'sgi',
			'common_name' => 'Sequoiadendron giganteum',
			'tax_id' => '99814',
			'version' => 'V2.0'
		),
		'sci' => array(
			'species' => 'sci',
			'common_name' => 'Simmondsia chinensis',
			'tax_id' => '3999',
			'version' => 'sc1'
		),
		'sly' => array(
			'species' => 'sly',
			'common_name' => 'Solanum lycopersicum',
			'tax_id' => '4081',
			'version' => 'ITAG4.0'
		),
		'spe' => array(
			'species' => 'spe',
			'common_name' => 'Solanum pennellii',
			'tax_id' => '28526',
			'version' => 'V2.0'
		),
		'stu' => array(
			'species' => 'stu',
			'common_name' => 'Solanum tuberosum',
			'tax_id' => '4113',
			'version' => 'JGI v4.03'
		),
		'sas' => array(
			'species' => 'sas',
			'common_name' => 'Striga asiatica',
			'tax_id' => '4170',
			'version' => 'v2.02'
		),
		'tha' => array(
			'species' => 'tha',
			'common_name' => 'Tarenaya hassleriana',
			'tax_id' => '28532',
			'version' => 'RefSeq v1'
		),
		'tca' => array(
			'species' => 'tca',
			'common_name' => 'Theobroma cacao',
			'tax_id' => '3641',
			'version' => 'V2.1'
		),
		'tpr' => array(
			'species' => 'tpr',
			'common_name' => 'Trifolium pratense',
			'tax_id' => '57577',
			'version' => 'V2.0'
		),
		'twi' => array(
			'species' => 'twi',
			'common_name' => 'Tripterygium wilfordii',
			'tax_id' => '458696',
			'version' => 'ASM1340144v1'
		),
		'tar' => array(
			'species' => 'tar',
			'common_name' => 'Trochodendron aralioides',
			'tax_id' => '4407',
			'version' => 'v1.0'
		),
		'ugi' => array(
			'species' => 'ugi',
			'common_name' => 'Utricularia gibba',
			'tax_id' => '13748',
			'version' => 'v1.1F'
		),
		'vma' => array(
			'species' => 'vma',
			'common_name' => 'Vaccinium macrocarpon',
			'tax_id' => '13750',
			'version' => 'V1.0'
		),
		'vpl' => array(
			'species' => 'vpl',
			'common_name' => 'Vanilla planifolia',
			'tax_id' => '51239',
			'version' => 'Elo Vpla-A Principal v1.0'
		),
		'vmu' => array(
			'species' => 'vmu',
			'common_name' => 'Vigna mungo',
			'tax_id' => '3915',
			'version' => 'ASM1342719v1'
		),
		'vvi' => array(
			'species' => 'vvi',
			'common_name' => 'Vitis vinifera',
			'tax_id' => '29760',
			'version' => 'Genoscope.12x'
		),
		'zma' => array(
			'species' => 'zma',
			'common_name' => 'Zea mays',
			'tax_id' => '4577',
			'version' => 'NAM v5.0'
		)
	),
	'allow_async_use' => true,
	'sidebar_information' => array(
		'type' => 'gf',
		'id' => 'HOM05D000865'
	),
	'data_identifier' => 'HOM05D000865',
	'data_type' => 'gf_id'
)
$sidebar_info = array(
	'gf_id' => 'HOM05D000865',
	'msa_exists' => array(
		'full' => true,
		'edited' => true
	),
	'tree_exists' => true,
	'num_genes' => '692',
	'num_species' => '92'
)
$sidebar = 'gene_family_sidebar'
$navigation_bar_info = array(
	'num_colinearity_runs' => (int) 1,
	'num_colinearity_with_dating_runs' => (int) 0,
	'num_functional_clusters_runs' => (int) 6,
	'has_pan_genomes' => false
)
$allowed_extra_sequences_types = array(
	'aa' => 'Protein',
	'dna' => 'DNA'
)
$allowed_editing_methods = array(
	'column' => 'Positions only',
	'row' => 'Genes only',
	'column_row' => 'Positions and Genes',
	'none' => 'No editing'
)
$allowed_tree_programs = array(
	'fasttree' => 'FastTree',
	'iqtree' => 'IQ-TREE (includes model testing)',
	'raxml' => 'RAxML',
	'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
	'muscle' => 'MUSCLE',
	'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
	(int) 0 => 'all',
	(int) 1 => (int) 20,
	(int) 2 => (int) 10,
	(int) 3 => (int) 5,
	(int) 4 => (int) 1
)
$gf_genes = array(
	'A01p21830' => 'bna',
	'A01p21840' => 'bna',
	'A01p21850' => 'bna',
	'A01p21860' => 'bna',
	'A01p37700' => 'bna',
	'A03p32640' => 'bna',
	'A03p39860' => 'bna',
	'A03p49260' => 'bna',
	'A03p49270' => 'bna',
	'A03p49290' => 'bna',
	'A04p00520' => 'bna',
	'A06p05920' => 'bna',
	'A08p11880' => 'bna',
	'A08p11890' => 'bna',
	'A08p11920' => 'bna',
	'A08p34820' => 'bna',
	'A09p65600' => 'bna',
	'Aa31LG10G16580' => 'aar',
	'Aa31LG10G6360' => 'aar',
	'Aa31LG10G6370' => 'aar',
	'Aa31LG10G6380' => 'aar',
	'Aa31LG8G3640' => 'aar',
	'Aa31LG8G3650' => 'aar',
	'Aa31sc55G160' => 'aar',
	'AagrBONN_evm.TU.Sc2ySwM_228.4654' => 'aag',
	'Actinidia00029' => 'ach',
	'Actinidia02602' => 'ach',
	'Actinidia04684' => 'ach',
	'Actinidia04740' => 'ach',
	'Actinidia14181' => 'ach',
	'Actinidia14306' => 'ach',
	'Actinidia15151' => 'ach',
	'Actinidia21059' => 'ach',
	'Actinidia21060' => 'ach',
	'Actinidia23056' => 'ach',
	'Actinidia23653' => 'ach',
	'Actinidia24648' => 'ach',
	'Actinidia25057' => 'ach',
	'Actinidia25058' => 'ach',
	'Actinidia27047' => 'ach',
	'Actinidia28405' => 'ach',
	'Actinidia30608' => 'ach',
	'Actinidia37708' => 'ach',
	'Ah.03g136530' => 'amhyb',
	'Ah.04g160490' => 'amhyb',
	'Ah.06g189650' => 'amhyb',
	'Ah.15g093890' => 'amhyb',
	'AL1G19510' => 'aly',
	'AL3G29330' => 'aly',
	'AL5G45560' => 'aly',
	'AL7G39590' => 'aly',
	'AL7G39600' => 'aly',
	'AL7G39630' => 'aly',
	'AL7G39640' => 'aly',
	'Aqoxy271s002' => 'aox',
	'Aqoxy2G03021' => 'aox',
	'Aqoxy5G02998' => 'aox',
	'AT1G09070' => 'ath',
	'AT2G05105' => 'ath',
	'AT3G16510' => 'ath',
	'AT3G62780' => 'ath',
	'AT4G15740' => 'ath',
	'AT4G15755' => 'ath',
	'ATR0582G345' => 'atr',
	'ATR0706G083' => 'atr',
	'Atru.chr12.1470' => 'acertr',
	'Atru.chr4.2817' => 'acertr',
	'Atru.chr5.1217' => 'acertr',
	'Atru.chr6.2728' => 'acertr',
	'AUR62005181' => 'cqu',
	'AUR62008595' => 'cqu',
	'AUR62018083' => 'cqu',
	'AUR62032535' => 'cqu',
	'AUR62033183' => 'cqu',
	'BcaB02g08098' => 'bca',
	'BcaB04g18311' => 'bca',
	'BcaB04g18316' => 'bca',
	'BcaB04g18317' => 'bca',
	'BcaB04g18904' => 'bca',
	'BcaB07g34125' => 'bca',
	'BcaC01g03815' => 'bca',
	'BcaC01g04512' => 'bca',
	'BcaC02g10312' => 'bca',
	'BcaC02g10313' => 'bca',
	'BcaC05g24761' => 'bca',
	'BcaC05g30259' => 'bca',
	'BcaC06g32954' => 'bca',
	'BcaC06g32955' => 'bca',
	'BcaC06g32956' => 'bca',
	'BcaC06g32957' => 'bca',
	'BcaC06g32958' => 'bca',
	'BcaC06g33429' => 'bca',
	'BcaC06g33430' => 'bca',
	'BcaC06g33452' => 'bca',
	'BcaC06g33453' => 'bca',
	'BcaC07g37912' => 'bca',
	'BcaC07g37913' => 'bca',
	'BcaC07g37927' => 'bca',
	'BcaC07g38479' => 'bca',
	'BcaC07g41905' => 'bca',
	'BcaC07g41906' => 'bca',
	'BcaC09g50264' => 'bca',
	'BcaC09g50266' => 'bca',
	'BcaC09g50267' => 'bca',
	'BcaNung00249' => 'bca',
	'BcaNung00250' => 'bca',
	'BcaNung00251' => 'bca',
	'BolC1t02661H' => 'bol',
	'BolC1t02662H' => 'bol',
	'BolC1t02663H' => 'bol',
	'BolC1t02664H' => 'bol',
	'BolC1t02665H' => 'bol',
	'BolC3t16237H' => 'bol',
	'BolC3t17113H' => 'bol',
	'BolC4t24577H' => 'bol',
	'BolC5t29466H' => 'bol',
	'BolC7t45257H' => 'bol',
	'BolC7t45262H' => 'bol',
	'BolC7t45263H' => 'bol',
	'BolC8t48302H' => 'bol',
	'BolC8t48303H' => 'bol',
	'BolC8t48308H' => 'bol',
	'BolC8t48884H' => 'bol',
	'BolC8t52496H' => 'bol',
	'BraA01t02091Z' => 'bra',
	'BraA01t02092Z' => 'bra',
	'BraA01t02093Z' => 'bra',
	'BraA03t12432Z' => 'bra',
	'BraA03t13134Z' => 'bra',
	'BraA03t14027Z' => 'bra',
	'BraA03t14028Z' => 'bra',
	'BraA03t14029Z' => 'bra',
	'BraA04t15772Z' => 'bra',
	'BraA06t23799Z' => 'bra',
	'BraA08t33179Z' => 'bra',
	'BraA08t33180Z' => 'bra',
	'BraA08t33182Z' => 'bra',
	'BraA08t35393Z' => 'bra',
	'BraA09t41904Z' => 'bra',
	'C01p27150' => 'bna',
	'C01p27160' => 'bna',
	'C01p27170' => 'bna',
	'C01p27180' => 'bna',
	'C03p39730' => 'bna',
	'C03p48330' => 'bna',
	'C04p30430' => 'bna',
	'C05p07110' => 'bna',
	'C07p47340' => 'bna',
	'C07p47350' => 'bna',
	'C07p47360' => 'bna',
	'C08p12440' => 'bna',
	'C08p49670' => 'bna',
	'CAN.G1652.13' => 'can',
	'CAN.G1652.15' => 'can',
	'CAN.G1971.1' => 'can',
	'CAN.G392.2' => 'can',
	'CAN.G903.3' => 'can',
	'CANSAT25G3656' => 'cansat',
	'CANSAT54G1245' => 'cansat',
	'CANSAT56G1399' => 'cansat',
	'CANSAT78G0327' => 'cansat',
	'CANSAT80G2586' => 'cansat',
	'CARHR008960' => 'chi',
	'CARHR054700' => 'chi',
	'CARHR091720' => 'chi',
	'CARHR173050' => 'chi',
	'CARHR180170' => 'chi',
	'CARHR290160' => 'chi',
	'CARHR290180' => 'chi',
	'CARHR290190' => 'chi',
	'CARHR290200' => 'chi',
	'Carub.0001s0839' => 'cru',
	'Carub.0001s3869' => 'cru',
	'Carub.0003s1626' => 'cru',
	'Carub.0005s2943' => 'cru',
	'Carub.0007s2588' => 'cru',
	'Carub.0007s2593' => 'cru',
	'Carub.0007s2594' => 'cru',
	'Carub.0007s2595' => 'cru',
	'Ca_01948_v3' => 'car',
	'Ca_08232_v3' => 'car',
	'Ca_21529_v3' => 'car',
	'Cc00_g10490' => 'ccan',
	'Cc00_g10550' => 'ccan',
	'Cc00_g25620' => 'ccan',
	'Cc10_g10850' => 'ccan',
	'Cc10_g10870' => 'ccan',
	'CDE02G1898' => 'cde',
	'CDE09G0399' => 'cde',
	'Cfa006615' => 'cfa',
	'Cfa006616' => 'cfa',
	'Cfa007138' => 'cfa',
	'Cfa009470' => 'cfa',
	'Cfa015375' => 'cfa',
	'Cfa015377' => 'cfa',
	'Ciclev10001783m.g' => 'ccl',
	'Ciclev10005259m.g' => 'ccl',
	'Ciclev10005548m.g' => 'ccl',
	'Ciclev10017662m.g' => 'ccl',
	'Ciclev10028983m.g' => 'ccl',
	'CiPaw.01G149500' => 'cil',
	'CiPaw.02G000100' => 'cil',
	'CiPaw.02G083700' => 'cil',
	'CiPaw.05G098600' => 'cil',
	'CiPaw.07G020300' => 'cil',
	'CiPaw.08G101400' => 'cil',
	'CiPaw.08G162900' => 'cil',
	'ClCG02G015510' => 'cla',
	'ClCG02G015520' => 'cla',
	'ClCG03G017040' => 'cla',
	'ClCG06G005200' => 'cla',
	'COL.COLO4_06613' => 'col',
	'COL.COLO4_10495' => 'col',
	'COL.COLO4_13890' => 'col',
	'COL.COLO4_23398' => 'col',
	'COL.COLO4_34625' => 'col',
	'COL.COLO4_35226' => 'col',
	'Cpa.g.sc16.163' => 'cpa',
	'Cpa.g.sc48.80' => 'cpa',
	'Cpa.g.sc70.37' => 'cpa',
	'CsaV3_1G038880' => 'csa',
	'CsaV3_2G006560' => 'csa',
	'CsaV3_2G006570' => 'csa',
	'CsaV3_3G014550' => 'csa',
	'CsaV3_6G017230' => 'csa',
	'CSS0011101' => 'camsi',
	'CSS0023807' => 'camsi',
	'CSS0024986' => 'camsi',
	'CSS0025346' => 'camsi',
	'CSS0039085' => 'camsi',
	'DCAR_009673' => 'dca',
	'DCAR_014116' => 'dca',
	'DCAR_022152' => 'dca',
	'DCAR_022155' => 'dca',
	'DCAR_024563' => 'dca',
	'DCAR_027081' => 'dca',
	'DCAR_030533' => 'dca',
	'Dinv07906' => 'din',
	'Dinv07912' => 'din',
	'Dinv27360' => 'din',
	'Dinv27362' => 'din',
	'Dinv27363' => 'din',
	'Dinv27365' => 'din',
	'Dinv27366' => 'din',
	'Dinv27367' => 'din',
	'Dinv27368' => 'din',
	'Dinv27369' => 'din',
	'Dinv29770' => 'din',
	'Dinv30152' => 'din',
	'Dinv30153' => 'din',
	'Dinv30790' => 'din',
	'Dinv30793' => 'din',
	'Dinv44389' => 'din',
	'Duzib052G0438' => 'dzi',
	'Duzib147G1335' => 'dzi',
	'Duzib151G1190' => 'dzi',
	'Duzib177G0415' => 'dzi',
	'Duzib187G0555' => 'dzi',
	'Duzib212G0059' => 'dzi',
	'ECA232G1931' => 'eca',
	'ECA233G2183' => 'eca',
	'ECA233G4973' => 'eca',
	'ECA233G5406' => 'eca',
	'ECA236G0710' => 'eca',
	'ECA240G0693' => 'eca',
	'ECA246G0531' => 'eca',
	'EL10Ac3g06587' => 'bvu',
	'EL10Ac4g09375' => 'bvu',
	'EL10Ac6g13906' => 'bvu',
	'EL10Ac7g17489' => 'bvu',
	'Eucgr.B01852' => 'egr',
	'Eucgr.B01929' => 'egr',
	'Eucgr.B01930' => 'egr',
	'Eucgr.G02756' => 'egr',
	'Eucgr.G02880' => 'egr',
	'Eucgr.G02885' => 'egr',
	'Eucgr.H03902' => 'egr',
	'Eucgr.I01570' => 'egr',
	'Eucgr.J01654' => 'egr',
	'Eucgr.J01655' => 'egr',
	'Eucgr.J01656' => 'egr',
	'Eucgr.J01658' => 'egr',
	'Eucgr.L00238' => 'egr',
	'Eucgr.L00247' => 'egr',
	'Eucgr.L02128' => 'egr',
	'FAN04G1523' => 'fan',
	'FAN05G0203' => 'fan',
	'FAN05G2988' => 'fan',
	'FAN06G3973' => 'fan',
	'FAN09G1327' => 'fan',
	'FAN11G1495' => 'fan',
	'FAN12G1524' => 'fan',
	'FAN12G1752' => 'fan',
	'FAN12G3320' => 'fan',
	'FAN12G3989' => 'fan',
	'FAN12G4021' => 'fan',
	'FAN14G4907' => 'fan',
	'FAN15G0232' => 'fan',
	'FAN17G0945' => 'fan',
	'FAN17G2096' => 'fan',
	'FAN19G2234' => 'fan',
	'FAN21G2915' => 'fan',
	'FAN22G2127' => 'fan',
	'FAN22G2168' => 'fan',
	'FAN22G2263' => 'fan',
	'FAN26G0033' => 'fan',
	'FAN26G2250' => 'fan',
	'FvH4_4g17880' => 'fve',
	'FvH4_4g17890' => 'fve',
	'FvH4_4g22200' => 'fve',
	'FvH4_4g32111' => 'fve',
	'FvH4_6g06320' => 'fve',
	'FvH4_6g06321' => 'fve',
	'Glyma.07G248600' => 'gma',
	'Glyma.09G045700' => 'gma',
	'Glyma.15G152900' => 'gma',
	'Glyma.16G045500' => 'gma',
	'Gohir.1Z049522' => 'ghi',
	'Gohir.A02G140000' => 'ghi',
	'Gohir.A05G376200' => 'ghi',
	'Gohir.A09G239900' => 'ghi',
	'Gohir.A11G266500' => 'ghi',
	'Gohir.A11G295000' => 'ghi',
	'Gohir.A12G009950' => 'ghi',
	'Gohir.D03G050400' => 'ghi',
	'Gohir.D09G240700' => 'ghi',
	'Gohir.D11G276800' => 'ghi',
	'Gohir.D11G309700' => 'ghi',
	'Gohir.D11G309750' => 'ghi',
	'Gohir.D11G309800' => 'ghi',
	'Gohir.D12G010000' => 'ghi',
	'Gorai.003G052000' => 'gra',
	'Gorai.006G263800' => 'gra',
	'Gorai.007G298900' => 'gra',
	'Gorai.007G341700' => 'gra',
	'Gorai.007G341800' => 'gra',
	'Gorai.007G341900' => 'gra',
	'Gorai.008G010000' => 'gra',
	'Gorai.012G044800' => 'gra',
	'GSVIVG01031119001' => 'vvi',
	'GSVIVG01037484001' => 'vvi',
	'HanXRQChr01g0027051' => 'han',
	'HanXRQChr01g0027071' => 'han',
	'HanXRQChr03g0060971' => 'han',
	'HanXRQChr03g0080791' => 'han',
	'HanXRQChr03g0080801' => 'han',
	'HanXRQChr03g0080821' => 'han',
	'HanXRQChr04g0122401' => 'han',
	'HanXRQChr05g0161071' => 'han',
	'HanXRQChr08g0212211' => 'han',
	'HanXRQChr08g0212221' => 'han',
	'HanXRQChr08g0212611' => 'han',
	'HanXRQChr08g0232501' => 'han',
	'HanXRQChr12g0364471' => 'han',
	'HanXRQChr13g0411371' => 'han',
	'HanXRQChr15g0486451' => 'han',
	'HanXRQChr17g0566961' => 'han',
	'Haze_01218' => 'cav',
	'Haze_04158' => 'cav',
	'Haze_04160' => 'cav',
	'Haze_14985' => 'cav',
	'Hma1.2p1_0009F.1_g006150' => 'hma',
	'Hma1.2p1_0009F.1_g006160' => 'hma',
	'Hma1.2p1_0009F.1_g006170' => 'hma',
	'Hma1.2p1_0402F.1_g145130' => 'hma',
	'Hma1.2p1_0491F.1_g164370' => 'hma',
	'Hma1.2p1_0738F.1_g210930' => 'hma',
	'Hma1.2p1_1374F.1_g278900' => 'hma',
	'Hma1.2p1_1374F.1_g278910' => 'hma',
	'HPP92_001320' => 'vpl',
	'HPP92_024383' => 'vpl',
	'HPP92_026256' => 'vpl',
	'Lalb_Chr15g0083531' => 'lal',
	'Lalb_Chr18g0051731' => 'lal',
	'Lalb_Chr24g0402961' => 'lal',
	'Lj1g0006851' => 'lja',
	'Lj3P816T16' => 'lonja',
	'Lj3P818T23' => 'lonja',
	'Lj4g0012125' => 'lja',
	'Lj6g0011988' => 'lja',
	'Lj6P674T15' => 'lonja',
	'Lj7A312G17' => 'lonja',
	'Lj7A317T45' => 'lonja',
	'Lj7A328T34' => 'lonja',
	'Lj7C313T0' => 'lonja',
	'Lj7C325T0' => 'lonja',
	'Lj7C325T2' => 'lonja',
	'Lj7C325T4' => 'lonja',
	'Lj7C326G12' => 'lonja',
	'Lj7C326T3' => 'lonja',
	'Lj7P312T3' => 'lonja',
	'Lj7P312T6' => 'lonja',
	'Lj7P313T4' => 'lonja',
	'Lj7P314T10' => 'lonja',
	'Lj7P315T11' => 'lonja',
	'Lj7P315T14' => 'lonja',
	'Lj7P315T8' => 'lonja',
	'Lj7P316T4' => 'lonja',
	'Lj7P324T10' => 'lonja',
	'Lj7P324T13' => 'lonja',
	'Lj7P325T13' => 'lonja',
	'Lj7P325T16' => 'lonja',
	'Lj7P326T14' => 'lonja',
	'Lj7P326T15' => 'lonja',
	'Lj7P326T18' => 'lonja',
	'Lj7P326T21' => 'lonja',
	'Lj7P326T27' => 'lonja',
	'Lj7P327T2' => 'lonja',
	'Lj7P327T5' => 'lonja',
	'Lsat_1_v5_gn_2_72960' => 'lsa',
	'Lsat_1_v5_gn_5_53581' => 'lsa',
	'Lsat_1_v5_gn_6_15121' => 'lsa',
	'Lsat_1_v5_gn_6_96660' => 'lsa',
	'Lsat_1_v5_gn_8_103180' => 'lsa',
	'Lsat_1_v5_gn_8_150161' => 'lsa',
	'Lsat_1_v5_gn_9_75640' => 'lsa',
	'Manes.04G097000' => 'mes',
	'Manes.08G099500' => 'mes',
	'Manes.08G119200' => 'mes',
	'Manes.11G073400' => 'mes',
	'Manes.15G013300' => 'mes',
	'MBI18_g14077_MAGBIO' => 'mbi',
	'MBI18_g14618_MAGBIO' => 'mbi',
	'MBI18_g37256_MAGBIO' => 'mbi',
	'MBI19_g00436_MAGBIO' => 'mbi',
	'MBI19_g13126_MAGBIO' => 'mbi',
	'MD02G1019900' => 'mdo',
	'MD04G1202300' => 'mdo',
	'MD12G1216300' => 'mdo',
	'MD13G1133900' => 'mdo',
	'MD13G1169700' => 'mdo',
	'MD13G1169800' => 'mdo',
	'MD16G1144500' => 'mdo',
	'MD16G1170900' => 'mdo',
	'MD17G1004000' => 'mdo',
	'Medtr2g033730' => 'mtr',
	'Medtr2g036000' => 'mtr',
	'Medtr2g036030' => 'mtr',
	'Medtr2g436900' => 'mtr',
	'Medtr4g119780' => 'mtr',
	'Medtr7g084680' => 'mtr',
	'MELO3C004229.2' => 'cme',
	'MELO3C006656.2' => 'cme',
	'MELO3C015314.2' => 'cme',
	'MELO3C021335.2' => 'cme',
	'MELO3C021336.2' => 'cme',
	'MELO3C021341.2' => 'cme',
	'Migut.B01030' => 'egut',
	'Migut.C01169' => 'egut',
	'Migut.C01170' => 'egut',
	'Migut.G00172' => 'egut',
	'Migut.N00094' => 'egut',
	'Migut.N03304' => 'egut',
	'Migut.N03305' => 'egut',
	'Migut.N03306' => 'egut',
	'Migut.N03308' => 'egut',
	'Migut.N03309' => 'egut',
	'Migut.N03310' => 'egut',
	'Migut.N03311' => 'egut',
	'MSTRG.1475' => 'ama',
	'MSTRG.22871' => 'ama',
	'Nitab4.5_0000051g0380' => 'nta',
	'Nitab4.5_0000191g0040' => 'nta',
	'Nitab4.5_0000494g0060' => 'nta',
	'Nitab4.5_0000960g0190' => 'nta',
	'Nitab4.5_0002344g0050' => 'nta',
	'Nitab4.5_0002344g0080' => 'nta',
	'Nitab4.5_0002420g0010' => 'nta',
	'Nitab4.5_0009303g0020' => 'nta',
	'Nitab4.5_0011450g0010' => 'nta',
	'Nitab4.5_0014335g0010' => 'nta',
	'Nn1g00545' => 'nnu',
	'Nn2g15293' => 'nnu',
	'Nn2g15294' => 'nnu',
	'Nn3g19708' => 'nnu',
	'Nn3g21412' => 'nnu',
	'Nn3g21413' => 'nnu',
	'Nn4g22075' => 'nnu',
	'Nn4g25895' => 'nnu',
	'Nn4g25897' => 'nnu',
	'Nn4g25898' => 'nnu',
	'Nn5g28013' => 'nnu',
	'Nn6g35455' => 'nnu',
	'Nn7g36920' => 'nnu',
	'Oeu017725.1' => 'oeu',
	'Oeu017726.1' => 'oeu',
	'Oeu024979.1' => 'oeu',
	'Oeu030038.1' => 'oeu',
	'Oeu030040.1' => 'oeu',
	'Oeu030041.1' => 'oeu',
	'Oeu040760.1' => 'oeu',
	'Oeu047927.1' => 'oeu',
	'Oeu050888.1' => 'oeu',
	'Oeu051839.1' => 'oeu',
	'Oeu058950.1' => 'oeu',
	'Oeu063347.1' => 'oeu',
	'Oeu063348.1' => 'oeu',
	'Os01g0369500' => 'osa',
	'Os01g0934100' => 'osa',
	'Os02g0518000' => 'osa',
	'Os05g0149100' => 'osa',
	'Os05g0370300' => 'osa',
	'Os07g0670200' => 'osa',
	'Os07g0670300' => 'osa',
	'Peaxi162Scf00014g00108' => 'pax',
	'Peaxi162Scf00014g00113' => 'pax',
	'Peaxi162Scf00014g00122' => 'pax',
	'Peaxi162Scf00028g00117' => 'pax',
	'Peaxi162Scf00037g00096' => 'pax',
	'Peaxi162Scf00037g00099' => 'pax',
	'Peaxi162Scf00071g00066' => 'pax',
	'Peaxi162Scf00488g00063' => 'pax',
	'Peaxi162Scf00534g00013' => 'pax',
	'Peaxi162Scf00849g00012' => 'pax',
	'PGR004G0121' => 'pgr',
	'PGR083G0395' => 'pgr',
	'PGR102G0313' => 'pgr',
	'PGR142G1530' => 'pgr',
	'PGSC0003DMG400004506' => 'stu',
	'PGSC0003DMG400024703' => 'stu',
	'PGSC0003DMG400024747' => 'stu',
	'PGSC0003DMG400029026' => 'stu',
	'Phvul.001G098700' => 'pvu',
	'Phvul.003G104400' => 'pvu',
	'Phvul.009G247100' => 'pvu',
	'Potri.001G070400' => 'ptr',
	'Potri.003G160400' => 'ptr',
	'Potri.005G026650' => 'ptr',
	'Potri.005G026700' => 'ptr',
	'Potri.008G209800' => 'ptr',
	'Potri.010G024200' => 'ptr',
	'Potri.013G018600' => 'ptr',
	'Potri.013G107175' => 'ptr',
	'Pp3c18_18670' => 'ppa',
	'Prupe.1G138000' => 'ppe',
	'Prupe.1G211700' => 'ppe',
	'Prupe.3G315200' => 'ppe',
	'Prupe.6G322500' => 'ppe',
	'Prupe.6G322600' => 'ppe',
	'Psat1g152800' => 'psa',
	'Psat3g092760' => 'psa',
	'Psat4g027040' => 'psa',
	'Psat4g027080' => 'psa',
	'PSO017G3240' => 'pso',
	'PSO478G4973' => 'pso',
	'PSO591G0270' => 'pso',
	'PSO675G0756' => 'pso',
	'PSO832G1537' => 'pso',
	'QL02p068256' => 'qlo',
	'QL02p068300' => 'qlo',
	'QL03p012524' => 'qlo',
	'QL03p012685' => 'qlo',
	'QL03p021168' => 'qlo',
	'QL03p021174' => 'qlo',
	'QL03p021194' => 'qlo',
	'QL03p021409' => 'qlo',
	'QL03p021415' => 'qlo',
	'QL03p021474' => 'qlo',
	'QL03p021480' => 'qlo',
	'QL03p021515' => 'qlo',
	'QL03p021556' => 'qlo',
	'QL03p021573' => 'qlo',
	'QL03p021805' => 'qlo',
	'QL03p027191' => 'qlo',
	'QL03p027328' => 'qlo',
	'QL03p048365' => 'qlo',
	'QL04p026382' => 'qlo',
	'QL04p026428' => 'qlo',
	'QL06p008669' => 'qlo',
	'QL11p050466' => 'qlo',
	'QL11p051131' => 'qlo',
	'QL12p026729' => 'qlo',
	'QL12p030197' => 'qlo',
	'QL12p030209' => 'qlo',
	'RcHm_v2.0_Chr3g0455361' => 'rch',
	'RcHm_v2.0_Chr3g0455371' => 'rch',
	'RcHm_v2.0_Chr4g0422011' => 'rch',
	'RcHm_v2.0_Chr4g0428431' => 'rch',
	'Rhsim02G0009600' => 'rsi',
	'Rhsim02G0009800' => 'rsi',
	'Rhsim02G0010600' => 'rsi',
	'Rhsim02G0010700' => 'rsi',
	'Rhsim02G0010900' => 'rsi',
	'Rhsim05G0141500' => 'rsi',
	'Rhsim07G0186400' => 'rsi',
	'Rhsim07G0186500' => 'rsi',
	'Rhsim11G0066200' => 'rsi',
	'Sabra03G0116600' => 'sbr',
	'Sabra05G0032000' => 'sbr',
	'Sabra13G0092400' => 'sbr',
	'SalBow2G1137' => 'sbo',
	'SalBow5G3436' => 'sbo',
	'SalBow6G3095' => 'sbo',
	'SalBow7G0931' => 'sbo',
	'SalBow7G1104' => 'sbo',
	'SalBow7G1310' => 'sbo',
	'SalBow7G1372' => 'sbo',
	'SalBow7G1730' => 'sbo',
	'SalBow7G2794' => 'sbo',
	'SalBow7G3084' => 'sbo',
	'SalBow7G3275' => 'sbo',
	'SalBow7G3635' => 'sbo',
	'Sc09g0003020' => 'sci',
	'Sc09g0007740' => 'sci',
	'Sc13g0003500' => 'sci',
	'Sc17g0003320' => 'sci',
	'Sc19g0005110' => 'sci',
	'Sed0006577' => 'sed',
	'Sed0007020' => 'sed',
	'Sed0013663' => 'sed',
	'Sed0014054' => 'sed',
	'Sed0014258' => 'sed',
	'Sed0020392' => 'sed',
	'SEGI_10261' => 'sgi',
	'SEGI_20084' => 'sgi',
	'SGA_v2.0_scaffold172G38976' => 'sas',
	'SGA_v2.0_scaffold25G11102' => 'sas',
	'SGA_v2.0_scaffold52G19000' => 'sas',
	'SGA_v2.0_scaffold67G22660' => 'sas',
	'SGA_v2.0_scaffold91G27990' => 'sas',
	'SHI18112' => 'shi',
	'Solyc01g099370.3' => 'sly',
	'Solyc08g028990.1' => 'sly',
	'Solyc11g013250.1' => 'sly',
	'Sopen01g042930' => 'spe',
	'Sopen01g042950' => 'spe',
	'Sopen08g009720' => 'spe',
	'Sopen11g008270' => 'spe',
	'Sp1g07670' => 'spa',
	'Sp3g14860' => 'spa',
	'Sp5g00740' => 'spa',
	'Sp7g14000' => 'spa',
	'Sp7g14010' => 'spa',
	'Sp7g14020' => 'spa',
	'Sp7g14030' => 'spa',
	'Sp7g14040' => 'spa',
	'Sp7g14060' => 'spa',
	'Sp7g14070' => 'spa',
	'Sp7g14080' => 'spa',
	'SpUn0665_0010' => 'spa',
	'TAR362G0271' => 'tar',
	'TAR622G0532' => 'tar',
	'TAR633G1600' => 'tar',
	'TAR636G2581' => 'tar',
	'THA.LOC104803088' => 'tha',
	'THA.LOC104805887' => 'tha',
	'THA.LOC104817502' => 'tha',
	'THA.LOC104820253' => 'tha',
	'THA.LOC104820822' => 'tha',
	'Thecc.01G239900' => 'tca',
	'Thecc.01G295100' => 'tca',
	'Thecc.04G051400' => 'tca',
	'Thecc.04G283200' => 'tca',
	'Thecc.05G311200' => 'tca',
	'Thhalv10006364m.g' => 'esa',
	'Thhalv10008221m.g' => 'esa',
	'Thhalv10021044m.g' => 'esa',
	'Thhalv10024954m.g' => 'esa',
	'Thhalv10025151m.g' => 'esa',
	'Thhalv10026748m.g' => 'esa',
	'Thhalv10026840m.g' => 'esa',
	'Thhalv10026991m.g' => 'esa',
	'Thhalv10026994m.g' => 'esa',
	'Thhalv10027084m.g' => 'esa',
	'Thhalv10027514m.g' => 'esa',
	'TPR.G26844' => 'tpr',
	'TPR.G31662' => 'tpr',
	'TPR.G3220' => 'tpr',
	'TWI12G0020' => 'twi',
	'TWI12G0843' => 'twi',
	'TWI12G0999' => 'twi',
	'TWI18G1208' => 'twi',
	'TWI36G0990' => 'twi',
	'TWI60G0277' => 'twi',
	'unitig_32.g11874' => 'ugi',
	'unitig_52.g17111' => 'ugi',
	'unitig_699.g19675' => 'ugi',
	'vmacro15239' => 'vma',
	'vmacro15240' => 'vma',
	'vmacro15241' => 'vma',
	'VMungo1215G3134' => 'vmu',
	'VMungo1309G0029' => 'vmu',
	'VMungo1383G1384' => 'vmu',
	'Zm00001eb089100' => 'zma',
	'Zm00001eb131850' => 'zma',
	'Zm00001eb142200' => 'zma',
	'Zm00001eb146140' => 'zma',
	'Zm00001eb154920' => 'zma',
	'Zm00001eb197960' => 'zma',
	'Zm00001eb285340' => 'zma',
	'Zm00001eb330300' => 'zma',
	'Zm00001eb363490' => 'zma'
)
$gf_id = 'HOM05D000865'
$gf_types_information = array(
	'HOMFAM' => array(
		'id' => 'HOMFAM',
		'name' => 'Homologous gene family',
		'gene_type' => 'coding',
		'parent_id' => '',
		'ancestry' => 'homology'
	),
	'ORTHOFAM' => array(
		'id' => 'ORTHOFAM',
		'name' => 'Orthologous gene family',
		'gene_type' => 'coding',
		'parent_id' => 'HOMFAM',
		'ancestry' => 'orthology'
	)
)
$gf_types_configuration = array(
	'HOMFAM' => array(
		'order' => '1',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	),
	'ORTHOFAM' => array(
		'order' => '2',
		'show_parentless_subfamilies' => 'false',
		'show_table' => 'true',
		'show_orphan' => false
	)
)
$all_species = array(
	'acertr' => array(
		'species' => 'acertr',
		'common_name' => 'Acer truncatum',
		'tax_id' => '47965',
		'version' => 'v2.0'
	),
	'ach' => array(
		'species' => 'ach',
		'common_name' => 'Actinidia chinensis',
		'tax_id' => '3625',
		'version' => 'V3.0'
	),
	'aar' => array(
		'species' => 'aar',
		'common_name' => 'Aethionema arabicum',
		'tax_id' => '228871',
		'version' => 'v3.1'
	),
	'amhyb' => array(
		'species' => 'amhyb',
		'common_name' => 'Amaranthus hybridus',
		'tax_id' => '3565',
		'version' => 'v1.0'
	),
	'atr' => array(
		'species' => 'atr',
		'common_name' => 'Amborella trichopoda',
		'tax_id' => '13333',
		'version' => 'JGI v1.0'
	),
	'aag' => array(
		'species' => 'aag',
		'common_name' => 'Anthoceros agrestis',
		'tax_id' => '41834',
		'version' => 'v1.1'
	),
	'aox' => array(
		'species' => 'aox',
		'common_name' => 'Aquilegia oxysepala',
		'tax_id' => '432649',
		'version' => 'v1.0'
	),
	'aly' => array(
		'species' => 'aly',
		'common_name' => 'Arabidopsis lyrata',
		'tax_id' => '59689',
		'version' => 'JGI v2.1'
	),
	'ath' => array(
		'species' => 'ath',
		'common_name' => 'Arabidopsis thaliana',
		'tax_id' => '3702',
		'version' => 'Araport11'
	),
	'arhy' => array(
		'species' => 'arhy',
		'common_name' => 'Arachis hypogaea',
		'tax_id' => '3818',
		'version' => 'v1.0'
	),
	'ama' => array(
		'species' => 'ama',
		'common_name' => 'Avicennia marina',
		'tax_id' => '82927',
		'version' => 'v1.1 20200527'
	),
	'bvu' => array(
		'species' => 'bvu',
		'common_name' => 'Beta vulgaris',
		'tax_id' => '161934',
		'version' => 'EL10_1.0'
	),
	'bca' => array(
		'species' => 'bca',
		'common_name' => 'Brassica carinata',
		'tax_id' => '52824',
		'version' => 'V1.0'
	),
	'bna' => array(
		'species' => 'bna',
		'common_name' => 'Brassica napus',
		'tax_id' => '3708',
		'version' => 'v2.0'
	),
	'bol' => array(
		'species' => 'bol',
		'common_name' => 'Brassica oleracea',
		'tax_id' => '109376',
		'version' => 'v1.0'
	),
	'bra' => array(
		'species' => 'bra',
		'common_name' => 'Brassica rapa',
		'tax_id' => '3711',
		'version' => 'v1.0'
	),
	'camsi' => array(
		'species' => 'camsi',
		'common_name' => 'Camellia sinensis var. sinensis',
		'tax_id' => '542762',
		'version' => 'CSS_ChrLev_20200506'
	),
	'cansat' => array(
		'species' => 'cansat',
		'common_name' => 'Cannabis sativa',
		'tax_id' => '3483',
		'version' => 'cs10'
	),
	'cru' => array(
		'species' => 'cru',
		'common_name' => 'Capsella rubella',
		'tax_id' => '81985',
		'version' => 'JGI v1.1'
	),
	'can' => array(
		'species' => 'can',
		'common_name' => 'Capsicum annuum',
		'tax_id' => '4072',
		'version' => 'Pepper Genome v2.0'
	),
	'chi' => array(
		'species' => 'chi',
		'common_name' => 'Cardamine hirsuta',
		'tax_id' => '50463',
		'version' => 'v1.0'
	),
	'cpa' => array(
		'species' => 'cpa',
		'common_name' => 'Carica papaya',
		'tax_id' => '3649',
		'version' => 'JGI ASGPB0.4'
	),
	'cfa' => array(
		'species' => 'cfa',
		'common_name' => 'Carpinus fangiana',
		'tax_id' => '176857',
		'version' => 'v1.0'
	),
	'cil' => array(
		'species' => 'cil',
		'common_name' => 'Carya illinoinensis',
		'tax_id' => '32201',
		'version' => 'v1.1'
	),
	'cde' => array(
		'species' => 'cde',
		'common_name' => 'Ceratophyllum demersum',
		'tax_id' => '4428',
		'version' => 'v1.0'
	),
	'cbr' => array(
		'species' => 'cbr',
		'common_name' => 'Chara braunii',
		'tax_id' => '69332',
		'version' => 'Cbr1.0'
	),
	'cqu' => array(
		'species' => 'cqu',
		'common_name' => 'Chenopodium quinoa',
		'tax_id' => '63459',
		'version' => 'KAUST v1.0'
	),
	'cre' => array(
		'species' => 'cre',
		'common_name' => 'Chlamydomonas reinhardtii',
		'tax_id' => '3055',
		'version' => 'JGI v5.5'
	),
	'car' => array(
		'species' => 'car',
		'common_name' => 'Cicer arietinum L.',
		'tax_id' => '3827',
		'version' => 'v3.0'
	),
	'cla' => array(
		'species' => 'cla',
		'common_name' => 'Citrullus lanatus',
		'tax_id' => '3654',
		'version' => 'WCG v2.0'
	),
	'ccl' => array(
		'species' => 'ccl',
		'common_name' => 'Citrus clementina',
		'tax_id' => '85681',
		'version' => 'JGI v1.0'
	),
	'ccan' => array(
		'species' => 'ccan',
		'common_name' => 'Coffea canephora',
		'tax_id' => '49390',
		'version' => 'Coffee Genome Hub v1'
	),
	'col' => array(
		'species' => 'col',
		'common_name' => 'Corchorus olitorius',
		'tax_id' => '93759',
		'version' => 'GenBank v1.0'
	),
	'cav' => array(
		'species' => 'cav',
		'common_name' => 'Corylus avellana',
		'tax_id' => '13451',
		'version' => 'v1.0'
	),
	'cme' => array(
		'species' => 'cme',
		'common_name' => 'Cucumis melo',
		'tax_id' => '3656',
		'version' => 'Melonomics v3.6.1'
	),
	'csa' => array(
		'species' => 'csa',
		'common_name' => 'Cucumis sativus L.',
		'tax_id' => '3659',
		'version' => 'v3.0'
	),
	'dca' => array(
		'species' => 'dca',
		'common_name' => 'Daucus carota',
		'tax_id' => '4039',
		'version' => 'JGI v2.0'
	),
	'din' => array(
		'species' => 'din',
		'common_name' => 'Davidia involucrata',
		'tax_id' => '16924',
		'version' => 'v1.0'
	),
	'dzi' => array(
		'species' => 'dzi',
		'common_name' => 'Durio zibethinus',
		'tax_id' => '66656',
		'version' => 'Duzib1.0'
	),
	'eca' => array(
		'species' => 'eca',
		'common_name' => 'Erigeron canadensis',
		'tax_id' => '72917',
		'version' => 'V1.0'
	),
	'egut' => array(
		'species' => 'egut',
		'common_name' => 'Erythranthe guttata',
		'tax_id' => '4155',
		'version' => 'v2.0'
	),
	'egr' => array(
		'species' => 'egr',
		'common_name' => 'Eucalyptus grandis',
		'tax_id' => '71139',
		'version' => 'v2.0'
	),
	'esa' => array(
		'species' => 'esa',
		'common_name' => 'Eutrema salsugineum',
		'tax_id' => '72664',
		'version' => 'v1.0'
	),
	'fve' => array(
		'species' => 'fve',
		'common_name' => 'Fragaria vesca',
		'tax_id' => '57918',
		'version' => 'V4.0.a2'
	),
	'fan' => array(
		'species' => 'fan',
		'common_name' => 'Fragaria x ananassa',
		'tax_id' => '3747',
		'version' => 'V1.0.a1'
	),
	'gma' => array(
		'species' => 'gma',
		'common_name' => 'Glycine max',
		'tax_id' => '3847',
		'version' => 'JGI Wm82.a4.v1'
	),
	'ghi' => array(
		'species' => 'ghi',
		'common_name' => 'Gossypium hirsutum',
		'tax_id' => '3635',
		'version' => 'v2.1'
	),
	'gra' => array(
		'species' => 'gra',
		'common_name' => 'Gossypium raimondii',
		'tax_id' => '29730',
		'version' => 'v2.1'
	),
	'han' => array(
		'species' => 'han',
		'common_name' => 'Helianthus annuus',
		'tax_id' => '4232',
		'version' => 'r1.2'
	),
	'hma' => array(
		'species' => 'hma',
		'common_name' => 'Hydrangea macrophylla',
		'tax_id' => '23110',
		'version' => 'v2.1'
	),
	'lsa' => array(
		'species' => 'lsa',
		'common_name' => 'Lactuca sativa',
		'tax_id' => '4236',
		'version' => 'v8.0'
	),
	'lonja' => array(
		'species' => 'lonja',
		'common_name' => 'Lonicera japonica',
		'tax_id' => '105884',
		'version' => 'v1.0'
	),
	'lja' => array(
		'species' => 'lja',
		'common_name' => 'Lotus japonicus',
		'tax_id' => '34305',
		'version' => 'Lj1.0v1'
	),
	'lal' => array(
		'species' => 'lal',
		'common_name' => 'Lupinus albus',
		'tax_id' => '3870',
		'version' => 'v1.0'
	),
	'mbi' => array(
		'species' => 'mbi',
		'common_name' => 'Magnolia biondii',
		'tax_id' => '86725',
		'version' => 'v1.0'
	),
	'mdo' => array(
		'species' => 'mdo',
		'common_name' => 'Malus domestica',
		'tax_id' => '3750',
		'version' => 'GDDH13 v1.1'
	),
	'mes' => array(
		'species' => 'mes',
		'common_name' => 'Manihot esculenta',
		'tax_id' => '3983',
		'version' => 'v8.1'
	),
	'mpo' => array(
		'species' => 'mpo',
		'common_name' => 'Marchantia polymorpha',
		'tax_id' => '3197',
		'version' => 'JGI v3.1'
	),
	'mtr' => array(
		'species' => 'mtr',
		'common_name' => 'Medicago truncatula',
		'tax_id' => '3880',
		'version' => 'JGI Mt4.0v1'
	),
	'mco' => array(
		'species' => 'mco',
		'common_name' => 'Micromonas commoda',
		'tax_id' => '296587',
		'version' => 'JGI v3.0'
	),
	'nnu' => array(
		'species' => 'nnu',
		'common_name' => 'Nelumbo nucifera',
		'tax_id' => '4432',
		'version' => 'v2.0'
	),
	'nta' => array(
		'species' => 'nta',
		'common_name' => 'Nicotiana tabacum',
		'tax_id' => '4097',
		'version' => 'Edwards2017'
	),
	'oeu' => array(
		'species' => 'oeu',
		'common_name' => 'Olea europaea',
		'tax_id' => '4146',
		'version' => 'v1.0'
	),
	'osa' => array(
		'species' => 'osa',
		'common_name' => 'Oryza sativa ssp. japonica',
		'tax_id' => '39947',
		'version' => 'IRGSP-1.0-2021-05-10'
	),
	'pso' => array(
		'species' => 'pso',
		'common_name' => 'Papaver somniferum',
		'tax_id' => '3469',
		'version' => 'ASM357369v1'
	),
	'pax' => array(
		'species' => 'pax',
		'common_name' => 'Petunia axillaris',
		'tax_id' => '33119',
		'version' => 'Sol Genomics v1.6.2'
	),
	'pvu' => array(
		'species' => 'pvu',
		'common_name' => 'Phaseolus vulgaris',
		'tax_id' => '3885',
		'version' => 'v2.1'
	),
	'ppa' => array(
		'species' => 'ppa',
		'common_name' => 'Physcomitrium patens',
		'tax_id' => '3218',
		'version' => 'JGI v3.3'
	),
	'psa' => array(
		'species' => 'psa',
		'common_name' => 'Pisum sativum',
		'tax_id' => '3888',
		'version' => 'V1.0a'
	),
	'ptr' => array(
		'species' => 'ptr',
		'common_name' => 'Populus trichocarpa',
		'tax_id' => '3694',
		'version' => 'JGI v4.1'
	),
	'pco' => array(
		'species' => 'pco',
		'common_name' => 'Prasinoderma coloniale',
		'tax_id' => '156133',
		'version' => 'v1.0'
	),
	'ppe' => array(
		'species' => 'ppe',
		'common_name' => 'Prunus persica',
		'tax_id' => '3760',
		'version' => 'v2.1'
	),
	'pgr' => array(
		'species' => 'pgr',
		'common_name' => 'Punica granatum',
		'tax_id' => '22663',
		'version' => 'ASM765513v2'
	),
	'qlo' => array(
		'species' => 'qlo',
		'common_name' => 'Quercus lobata',
		'tax_id' => '97700',
		'version' => 'v3.0'
	),
	'rsi' => array(
		'species' => 'rsi',
		'common_name' => 'Rhododendron simsii',
		'tax_id' => '118357',
		'version' => 'v1.0'
	),
	'rch' => array(
		'species' => 'rch',
		'common_name' => 'Rosa chinensis',
		'tax_id' => '74649',
		'version' => 'v2.0'
	),
	'sbr' => array(
		'species' => 'sbr',
		'common_name' => 'Salix brachista',
		'tax_id' => '2182728',
		'version' => 'v1.0'
	),
	'sbo' => array(
		'species' => 'sbo',
		'common_name' => 'Salvia bowleyana',
		'tax_id' => '424416',
		'version' => 'v1.0'
	),
	'shi' => array(
		'species' => 'shi',
		'common_name' => 'Sapria himalayana',
		'tax_id' => '289637',
		'version' => 'v1.0'
	),
	'spa' => array(
		'species' => 'spa',
		'common_name' => 'Schrenkiella parvula',
		'tax_id' => '98039',
		'version' => 'v2.2'
	),
	'sed' => array(
		'species' => 'sed',
		'common_name' => 'Sechium edule',
		'tax_id' => '184140',
		'version' => 'v1.0'
	),
	'smo' => array(
		'species' => 'smo',
		'common_name' => 'Selaginella moellendorffii',
		'tax_id' => '88036',
		'version' => 'v1.0'
	),
	'sun' => array(
		'species' => 'sun',
		'common_name' => 'Selenicereus undatus',
		'tax_id' => '176265',
		'version' => 'v1.0'
	),
	'sgi' => array(
		'species' => 'sgi',
		'common_name' => 'Sequoiadendron giganteum',
		'tax_id' => '99814',
		'version' => 'V2.0'
	),
	'sci' => array(
		'species' => 'sci',
		'common_name' => 'Simmondsia chinensis',
		'tax_id' => '3999',
		'version' => 'sc1'
	),
	'sly' => array(
		'species' => 'sly',
		'common_name' => 'Solanum lycopersicum',
		'tax_id' => '4081',
		'version' => 'ITAG4.0'
	),
	'spe' => array(
		'species' => 'spe',
		'common_name' => 'Solanum pennellii',
		'tax_id' => '28526',
		'version' => 'V2.0'
	),
	'stu' => array(
		'species' => 'stu',
		'common_name' => 'Solanum tuberosum',
		'tax_id' => '4113',
		'version' => 'JGI v4.03'
	),
	'sas' => array(
		'species' => 'sas',
		'common_name' => 'Striga asiatica',
		'tax_id' => '4170',
		'version' => 'v2.02'
	),
	'tha' => array(
		'species' => 'tha',
		'common_name' => 'Tarenaya hassleriana',
		'tax_id' => '28532',
		'version' => 'RefSeq v1'
	),
	'tca' => array(
		'species' => 'tca',
		'common_name' => 'Theobroma cacao',
		'tax_id' => '3641',
		'version' => 'V2.1'
	),
	'tpr' => array(
		'species' => 'tpr',
		'common_name' => 'Trifolium pratense',
		'tax_id' => '57577',
		'version' => 'V2.0'
	),
	'twi' => array(
		'species' => 'twi',
		'common_name' => 'Tripterygium wilfordii',
		'tax_id' => '458696',
		'version' => 'ASM1340144v1'
	),
	'tar' => array(
		'species' => 'tar',
		'common_name' => 'Trochodendron aralioides',
		'tax_id' => '4407',
		'version' => 'v1.0'
	),
	'ugi' => array(
		'species' => 'ugi',
		'common_name' => 'Utricularia gibba',
		'tax_id' => '13748',
		'version' => 'v1.1F'
	),
	'vma' => array(
		'species' => 'vma',
		'common_name' => 'Vaccinium macrocarpon',
		'tax_id' => '13750',
		'version' => 'V1.0'
	),
	'vpl' => array(
		'species' => 'vpl',
		'common_name' => 'Vanilla planifolia',
		'tax_id' => '51239',
		'version' => 'Elo Vpla-A Principal v1.0'
	),
	'vmu' => array(
		'species' => 'vmu',
		'common_name' => 'Vigna mungo',
		'tax_id' => '3915',
		'version' => 'ASM1342719v1'
	),
	'vvi' => array(
		'species' => 'vvi',
		'common_name' => 'Vitis vinifera',
		'tax_id' => '29760',
		'version' => 'Genoscope.12x'
	),
	'zma' => array(
		'species' => 'zma',
		'common_name' => 'Zea mays',
		'tax_id' => '4577',
		'version' => 'NAM v5.0'
	)
)
$allow_async_use = true
$sidebar_information = array(
	'type' => 'gf',
	'id' => 'HOM05D000865'
)
$data_identifier = 'HOM05D000865'
$data_type = 'gf_id'
$species_gene_counts = array(
	'bna' => (int) 30,
	'aar' => (int) 7,
	'aag' => (int) 1,
	'ach' => (int) 18,
	'amhyb' => (int) 4,
	'aly' => (int) 7,
	'aox' => (int) 3,
	'ath' => (int) 6,
	'atr' => (int) 2,
	'acertr' => (int) 4,
	'cqu' => (int) 5,
	'bca' => (int) 33,
	'bol' => (int) 17,
	'bra' => (int) 15,
	'can' => (int) 5,
	'cansat' => (int) 5,
	'chi' => (int) 9,
	'cru' => (int) 8,
	'car' => (int) 3,
	'ccan' => (int) 5,
	'cde' => (int) 2,
	'cfa' => (int) 6,
	'ccl' => (int) 5,
	'cil' => (int) 7,
	'cla' => (int) 4,
	'col' => (int) 6,
	'cpa' => (int) 3,
	'csa' => (int) 5,
	'camsi' => (int) 5,
	'dca' => (int) 7,
	'din' => (int) 16,
	'dzi' => (int) 6,
	'eca' => (int) 7,
	'bvu' => (int) 4,
	'egr' => (int) 15,
	'fan' => (int) 22,
	'fve' => (int) 6,
	'gma' => (int) 4,
	'ghi' => (int) 14,
	'gra' => (int) 8,
	'vvi' => (int) 2,
	'han' => (int) 16,
	'cav' => (int) 4,
	'hma' => (int) 8,
	'vpl' => (int) 3,
	'lal' => (int) 3,
	'lja' => (int) 3,
	'lonja' => (int) 31,
	'lsa' => (int) 7,
	'mes' => (int) 5,
	'mbi' => (int) 5,
	'mdo' => (int) 9,
	'mtr' => (int) 6,
	'cme' => (int) 6,
	'egut' => (int) 12,
	'ama' => (int) 2,
	'nta' => (int) 10,
	'nnu' => (int) 13,
	'oeu' => (int) 13,
	'osa' => (int) 7,
	'pax' => (int) 10,
	'pgr' => (int) 4,
	'stu' => (int) 4,
	'pvu' => (int) 3,
	'ptr' => (int) 8,
	'ppa' => (int) 1,
	'ppe' => (int) 5,
	'psa' => (int) 4,
	'pso' => (int) 5,
	'qlo' => (int) 26,
	'rch' => (int) 4,
	'rsi' => (int) 9,
	'sbr' => (int) 3,
	'sbo' => (int) 12,
	'sci' => (int) 5,
	'sed' => (int) 6,
	'sgi' => (int) 2,
	'sas' => (int) 5,
	'shi' => (int) 1,
	'sly' => (int) 3,
	'spe' => (int) 4,
	'spa' => (int) 12,
	'tar' => (int) 4,
	'tha' => (int) 5,
	'tca' => (int) 5,
	'esa' => (int) 11,
	'tpr' => (int) 3,
	'twi' => (int) 6,
	'ugi' => (int) 3,
	'vma' => (int) 3,
	'vmu' => (int) 3,
	'zma' => (int) 9
)
$gf_gene_species = 'zma'
$gf_gene_id = 'Zm00001eb363490'
$species_info = array(
	'species' => 'mbi',
	'common_name' => 'Magnolia biondii',
	'tax_id' => '86725',
	'version' => 'v1.0'
)
$local_species = 'mbi'
$disabled = ''
$selected = ''
$num_hits = (int) 1
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::_renderElement() - CORE/Cake/View/View.php, line 1224
View::element() - CORE/Cake/View/View.php, line 418
include - APP/View/Analysis/custom_tree_creation.ctp, line 27
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933