Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23227 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 1.7e-114 416.0 209 100.0
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 3.7e-24 115.9 62 96.8
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 7.9e-19 98.2 69 72.5
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 1.9e-17 93.6 62 77.4
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 3.7e-16 89.4 69 71.0
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 6.9e-15 85.1 62 69.4
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 1.3e-13 80.9 62 71.0
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 3.8e-13 79.3 69 59.4
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 6.5e-13 78.6 69 60.9
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 1.9e-12 77.0 65 60.0
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 1.9e-12 77.0 66 59.1
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 3.2e-12 76.3 63 69.8
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 4.2e-12 75.9 68 64.7
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 5.5e-12 75.5 81 55.6
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 7.1e-12 75.1 69 59.4
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 7.1e-12 75.1 70 62.9
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 7.1e-12 75.1 63 61.9
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 1.2e-11 74.3 65 61.5
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 2.1e-11 73.6 63 68.3
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 2.7e-11 73.2 62 62.9
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 3.5e-11 72.8 56 69.6
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 3.5e-11 72.8 66 63.6
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 4.6e-11 72.4 72 55.6
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 7.9e-11 71.6 69 56.5
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 7.9e-11 71.6 65 61.5
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 7.9e-11 71.6 40 82.5
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 1.0e-10 71.2 65 60.0
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 1.0e-10 71.2 62 69.4
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 1.0e-10 71.2 62 69.4
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 1.3e-10 70.9 48 70.8
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 1.3e-10 70.9 61 60.7
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 1.8e-10 70.5 63 60.3
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 1.8e-10 70.5 71 54.9
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 1.8e-10 70.5 61 62.3
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 1.8e-10 70.5 63 60.3
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 3.0e-10 69.7 64 60.9
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 3.0e-10 69.7 63 69.8
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 3.0e-10 69.7 63 69.8
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 3.0e-10 69.7 88 50.0
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 3.0e-10 69.7 79 51.9
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 3.9e-10 69.3 63 58.7
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 3.9e-10 69.3 62 62.9
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 3.9e-10 69.3 61 54.1
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 3.9e-10 69.3 64 60.9
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 5.1e-10 68.9 79 50.6
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 5.1e-10 68.9 40 82.5
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 5.1e-10 68.9 79 51.9
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 5.1e-10 68.9 59 59.3
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 6.7e-10 68.6 62 61.3
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 8.7e-10 68.2 92 44.6
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 8.7e-10 68.2 43 74.4
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 8.7e-10 68.2 88 48.9
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 8.7e-10 68.2 40 80.0
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 8.7e-10 68.2 62 59.7
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 8.7e-10 68.2 63 61.9
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 1.1e-09 67.8 67 56.7
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 1.1e-09 67.8 90 45.6
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 1.5e-09 67.4 43 72.1
Sabra06G0004100 Salix brachista HOM05D005493 ORTHO05D007154 1.5e-09 67.4 65 58.5
FvH4_1g24140 Fragaria vesca HOM05D005493 ORTHO05D007154 1.9e-09 67.0 84 45.2
FAN19G1729 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.9e-09 67.0 84 45.2
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 1.9e-09 67.0 53 66.0
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 2.5e-09 66.6 70 57.1
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 2.5e-09 66.6 62 61.3
Oeu025962.1 Olea europaea HOM05D005493 ORTHO05D007154 4.3e-09 65.9 81 50.6
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 4.3e-09 65.9 66 53.0
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 7.4e-09 65.1 83 44.6
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 7.4e-09 65.1 49 63.3
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 7.4e-09 65.1 67 53.7
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 7.4e-09 65.1 91 50.5
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 7.4e-09 65.1 54 64.8
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 1.3e-08 64.3 63 58.7
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 1.3e-08 64.3 62 54.8
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 1.3e-08 64.3 62 54.8
GSVIVG01002894001 Vitis vinifera HOM05D005493 ORTHO05D007154 2.2e-08 63.5 67 59.7
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 2.8e-08 63.2 59 61.0
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 2.8e-08 63.2 43 65.1
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 3.7e-08 62.8 70 50.0
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 3.7e-08 62.8 82 43.9
FAN23G1811 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.7e-08 62.8 84 44.0
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 4.8e-08 62.4 43 67.4
MBI14_g10146_MAGBIO Magnolia biondii HOM05D005493 ORTHO05D007154 4.8e-08 62.4 34 85.3
BcaC06g31350 Brassica carinata HOM05D005493 ORTHO05D007154 6.3e-08 62.0 42 76.2
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 6.3e-08 62.0 77 50.6
A09p23180 Brassica napus HOM05D005493 ORTHO05D007154 6.3e-08 62.0 64 54.7
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 6.3e-08 62.0 77 50.6
BraA09t37921Z Brassica rapa HOM05D005493 ORTHO05D007154 6.3e-08 62.0 64 54.7
Thhalv10000943m.g Eutrema salsugineum HOM05D005493 ORTHO05D007154 6.3e-08 62.0 82 42.7
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 8.2e-08 61.6 63 54.0
BolC9t55855H Brassica oleracea HOM05D005493 ORTHO05D007154 8.2e-08 61.6 75 50.7
BcaC04g21607 Brassica carinata HOM05D005493 ORTHO05D007154 1.1e-07 61.2 64 54.7
C09p29920 Brassica napus HOM05D005493 ORTHO05D007154 1.1e-07 61.2 64 54.7
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 1.1e-07 61.2 50 62.0
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 1.1e-07 61.2 62 53.2
AT5G47680 Arabidopsis thaliana HOM05D005493 ORTHO05D007154 1.4e-07 60.8 83 41.0
Zm00001eb070580 Zea mays HOM05D005493 ORTHO05D007154 1.4e-07 60.8 39 71.8
Zm00001eb168490 Zea mays HOM05D000087 ORTHO05D011931 1.4e-07 60.8 39 71.8
Zm00001eb264500 Zea mays HOM05D005493 ORTHO05D007154 1.4e-07 60.8 39 71.8
Os02g0725600 Oryza sativa ssp. japonica HOM05D005493 ORTHO05D007154 1.8e-07 60.5 65 55.4
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 1.8e-07 60.5 82 43.9
AUR62034063 Chenopodium quinoa HOM05D005493 ORTHO05D007154 2.4e-07 60.1 63 47.6
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 3.1e-07 59.7 55 58.2
AL8G10270 Arabidopsis lyrata HOM05D005493 ORTHO05D007154 4.1e-07 59.3 76 47.4
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 6.9e-07 58.5 41 73.2
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 1.2e-06 57.8 55 58.2
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 2.6e-06 56.6 65 49.2
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 3.4e-06 56.2 80 43.8
unitig_37.g12179 Utricularia gibba HOM05D005493 ORTHO05D007154 4.5e-06 55.8 56 51.8


User provided reference genes

Program Settings