Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.2e-158 563.1 294 100.0
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.0e-88 330.9 249 74.7
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.9e-79 300.1 248 69.4
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 5.6e-71 271.9 250 62.0
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 9.6e-71 271.2 250 62.0
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 9.6e-71 271.2 250 62.0
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 5.2e-69 265.4 249 60.2
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.7e-67 260.4 251 59.8
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 8.4e-67 258.1 249 58.2
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 1.2e-65 254.2 249 59.8
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 2.1e-65 253.4 248 58.9
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 2.7e-65 253.1 250 58.4
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 2.3e-64 250.0 237 62.0
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 2.3e-64 250.0 249 56.6
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 2.3e-64 250.0 249 57.8
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 3.0e-64 249.6 251 56.6
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.3e-63 246.1 249 57.8
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 3.3e-63 246.1 249 58.2
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 5.6e-63 245.4 249 56.2
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 7.3e-63 245.0 246 58.9
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 7.3e-63 245.0 249 57.4
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 2.1e-62 243.4 250 54.8
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.1e-62 243.4 249 57.8
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 2.8e-62 243.0 250 54.8
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 3.6e-62 242.7 251 54.6
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 4.8e-62 242.3 250 55.2
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 6.2e-62 241.9 250 56.4
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 6.2e-62 241.9 250 56.0
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 8.1e-62 241.5 249 54.6
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 8.1e-62 241.5 249 54.6
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 8.1e-62 241.5 249 56.6
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 1.1e-61 241.1 249 55.8
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 1.1e-61 241.1 250 55.2
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.8e-61 240.4 249 56.2
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 3.1e-61 239.6 250 54.4
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 4.0e-61 239.2 250 54.8
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 5.3e-61 238.8 250 54.8
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 5.3e-61 238.8 250 54.8
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 5.3e-61 238.8 250 56.0
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 6.9e-61 238.4 250 54.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 6.9e-61 238.4 249 54.6
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 9.0e-61 238.0 249 55.4
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 9.0e-61 238.0 249 53.8
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 1.2e-60 237.7 250 55.2
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.5e-60 237.3 248 55.6
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.5e-60 237.3 249 53.8
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.6e-60 236.5 251 54.2
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.6e-60 236.5 249 54.6
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.4e-60 236.1 250 54.8
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 4.5e-60 235.7 250 54.8
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 5.8e-60 235.3 249 53.4
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 7.6e-60 235.0 250 55.2
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 9.9e-60 234.6 249 55.0
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 9.9e-60 234.6 249 54.2
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 9.9e-60 234.6 249 53.4
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 1.3e-59 234.2 250 53.6
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 1.7e-59 233.8 250 55.6
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 2.9e-59 233.0 249 53.4
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 4.9e-59 232.3 249 54.2
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 6.4e-59 231.9 249 55.4
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.1e-58 231.1 250 52.8
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 1.1e-58 231.1 250 52.8
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 1.1e-58 231.1 249 54.2
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 3.2e-58 229.6 250 55.2
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 5.4e-58 228.8 265 52.5
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 1.6e-57 227.3 251 51.4
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 2.1e-57 226.9 250 52.8
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 2.1e-57 226.9 256 53.5
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 2.1e-57 226.9 249 53.0
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 2.7e-57 226.5 248 53.2
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 6.0e-57 225.3 249 52.2
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.0e-56 224.6 249 53.4
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 8.7e-56 221.5 250 53.6
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 1.1e-55 221.1 249 50.2
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 4.3e-55 219.2 251 52.6
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 8.1e-54 214.9 246 51.6
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 2.4e-53 213.4 233 52.8
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 4.0e-53 212.6 153 72.5
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 9.0e-53 211.5 249 52.6
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 2.6e-52 209.9 249 49.4
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 4.5e-52 209.1 250 50.0
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 1.1e-50 204.5 166 66.3
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 5.5e-50 202.2 166 66.9
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.1e-49 200.3 191 58.6
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 1.9e-47 193.7 207 54.6
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 1.6e-46 190.7 208 54.3
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.1e-45 188.0 265 44.2
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.2e-44 184.5 252 46.8
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 7.6e-44 181.8 252 46.4
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 2.9e-43 179.9 249 47.0
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.1e-42 177.9 251 44.2
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.9e-40 169.5 153 58.8
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 5.1e-40 169.1 177 57.1
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 6.7e-40 168.7 244 42.6
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 2.5e-39 166.8 243 42.4
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 8.2e-38 161.8 252 41.7
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.8e-37 160.6 249 40.6
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 2.4e-37 160.2 252 41.3
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 6.5e-35 152.1 144 57.6
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 3.6e-33 146.4 113 67.3
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.8e-32 144.1 104 72.1
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.6e-30 137.5 250 39.2
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.3e-27 127.9 130 54.6
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 1.8e-21 107.5 73 72.6
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.1e-21 105.1 89 65.2
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.3e-19 101.3 72 69.4
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 3.8e-19 99.8 113 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 8.5e-19 98.6 156 41.0
Nn1g00103 Nelumbo nucifera HOM05D001598 ORTHO05D007192 2.5e-18 97.1 139 42.4
Os04g0661600 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D007192 8.8e-16 88.6 60 76.7
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 7.4e-15 85.5 238 31.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.2e-14 84.0 159 36.5
TWI56G1164 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 2.6e-07 60.5 47 59.6
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 6.3e-06 55.8 90 38.9


User provided reference genes

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