Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.4e-81 305.4 152 100.0
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 9.4e-54 213.8 105 100.0
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 2.8e-50 202.2 129 78.3
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 5.0e-47 191.4 105 86.7
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 2.5e-46 189.1 105 87.6
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 5.5e-46 188.0 105 85.7
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 5.5e-46 188.0 105 85.7
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 9.4e-46 187.2 125 76.0
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 9.4e-46 187.2 105 84.8
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.2e-45 186.8 121 78.5
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.2e-45 186.8 105 85.7
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.2e-45 186.8 105 86.7
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.2e-45 186.8 105 86.7
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.2e-45 186.8 105 86.7
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 1.2e-45 186.8 105 83.8
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.6e-45 186.4 135 69.6
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.6e-45 186.4 135 70.4
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 2.1e-45 186.0 135 70.4
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 2.7e-45 185.7 105 86.7
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 2.7e-45 185.7 105 86.7
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 2.7e-45 185.7 105 84.8
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 3.6e-45 185.3 105 84.8
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 3.6e-45 185.3 135 70.4
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 3.6e-45 185.3 135 70.4
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 4.7e-45 184.9 105 85.7
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 4.7e-45 184.9 105 85.7
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 4.7e-45 184.9 135 68.9
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 4.7e-45 184.9 105 84.8
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 6.1e-45 184.5 105 84.8
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 6.1e-45 184.5 105 85.7
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 6.1e-45 184.5 135 69.6
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 6.1e-45 184.5 105 84.8
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 7.9e-45 184.1 103 86.4
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 7.9e-45 184.1 105 84.8
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 1.0e-44 183.7 129 72.9
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.0e-44 183.7 105 85.7
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.4e-44 183.3 105 85.7
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 1.8e-44 183.0 105 84.8
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 2.3e-44 182.6 105 82.9
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 2.3e-44 182.6 105 82.9
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 2.3e-44 182.6 105 84.8
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 2.3e-44 182.6 135 67.4
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 2.3e-44 182.6 117 75.2
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 2.3e-44 182.6 105 84.8
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 3.0e-44 182.2 105 82.9
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 3.0e-44 182.2 134 68.7
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 3.0e-44 182.2 134 68.7
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 3.0e-44 182.2 105 84.8
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 3.0e-44 182.2 135 68.9
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 3.0e-44 182.2 105 84.8
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 3.9e-44 181.8 105 82.9
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 3.9e-44 181.8 105 84.8
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 5.2e-44 181.4 105 82.9
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 5.2e-44 181.4 105 84.8
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 5.2e-44 181.4 105 83.8
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 5.2e-44 181.4 104 84.6
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 5.2e-44 181.4 105 82.9
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 6.7e-44 181.0 105 84.8
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 6.7e-44 181.0 105 82.9
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 8.8e-44 180.6 105 82.9
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 8.8e-44 180.6 135 67.4
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 8.8e-44 180.6 105 82.9
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 8.8e-44 180.6 105 83.8
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 8.8e-44 180.6 105 81.9
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.1e-43 180.3 105 82.9
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 1.1e-43 180.3 105 83.8
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 1.1e-43 180.3 105 83.8
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.1e-43 180.3 105 83.8
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.5e-43 179.9 105 82.9
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 82.9
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 83.8
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.0e-43 179.5 105 83.8
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 2.6e-43 179.1 105 82.9
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 3.3e-43 178.7 105 81.0
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 3.3e-43 178.7 105 83.8
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.3e-43 178.7 105 83.8
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 5.7e-43 177.9 105 82.9
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 5.7e-43 177.9 105 82.9
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 5.7e-43 177.9 105 82.9
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 5.7e-43 177.9 105 83.8
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 7.4e-43 177.6 105 81.0
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 1.3e-42 176.8 105 81.9
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.3e-42 176.8 105 81.9
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.3e-42 176.8 105 81.9
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 1.7e-42 176.4 105 82.9
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 1.7e-42 176.4 105 81.9
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 1.7e-42 176.4 105 81.0
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.7e-42 176.4 106 81.1
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 2.2e-42 176.0 105 80.0
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 2.2e-42 176.0 105 82.9
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.8e-42 175.6 105 81.9
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 3.7e-42 175.3 105 81.0
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 6.3e-42 174.5 105 80.0
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 9.1e-41 170.6 108 77.8
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 9.1e-41 170.6 130 67.7
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 1.2e-40 170.2 105 79.0
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 2.6e-40 169.1 118 72.0
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 4.5e-40 168.3 91 90.1
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 2.2e-39 166.0 105 77.1
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 7.2e-38 161.0 105 74.3
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 7.2e-38 161.0 105 75.2
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 4.0e-36 155.2 113 67.3
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 9.1e-33 144.1 134 55.2
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.0e-31 140.6 115 61.7
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.5e-30 136.7 124 54.0
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 5.5e-30 134.8 71 87.3
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 8.3e-26 120.9 116 60.3
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 2.7e-24 115.9 61 83.6
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.5e-24 115.5 112 60.7
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.5e-22 109.4 62 77.4
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 2.5e-22 109.4 62 88.7
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.4e-17 93.6 55 78.2
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 1.5e-14 83.6 50 70.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 4.6e-08 62.0 60 61.7
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 5.6e-06 55.1 36 75.0


User provided reference genes

Program Settings