Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 6.5e-279 963.4 476 100.0
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.9e-233 812.4 476 86.8
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 2.3e-223 778.9 476 82.8
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 4.2e-217 758.1 519 75.9
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 4.6e-216 754.6 476 79.8
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 3.0e-215 751.9 476 79.6
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 5.1e-215 751.1 476 79.6
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 6.7e-215 750.7 476 79.2
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 6.7e-215 750.7 476 79.4
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 1.5e-214 749.6 476 79.4
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 4.8e-213 744.6 473 78.9
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 1.8e-212 742.7 476 78.4
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 2.4e-212 742.3 473 79.1
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 2.4e-212 742.3 473 79.5
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 4.0e-212 741.5 476 77.9
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 4.0e-212 741.5 473 78.9
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 9.0e-212 740.3 476 78.8
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 9.0e-212 740.3 475 78.7
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 9.0e-212 740.3 473 78.0
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 1.5e-211 739.6 473 78.9
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 1.5e-211 739.6 473 79.1
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 1.5e-211 739.6 475 78.9
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 2.0e-211 739.2 473 78.6
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 2.0e-211 739.2 476 78.6
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 2.6e-211 738.8 476 78.8
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 4.5e-211 738.0 476 78.4
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 7.6e-211 737.3 473 78.4
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 1.0e-210 736.9 473 79.1
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 1.0e-210 736.9 476 77.9
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 1.0e-210 736.9 472 78.0
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.7e-210 736.1 473 78.9
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 2.9e-210 735.3 470 78.3
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 8.4e-210 733.8 473 78.4
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.4e-209 733.0 476 76.9
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.4e-209 733.0 473 78.4
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 1.4e-209 733.0 476 76.9
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.9e-209 732.6 473 78.6
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 1.9e-209 732.6 470 78.3
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 3.2e-209 731.9 473 78.2
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 3.2e-209 731.9 470 78.1
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 3.2e-209 731.9 476 77.5
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 4.2e-209 731.5 473 77.6
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 9.3e-209 730.3 476 76.7
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 9.3e-209 730.3 473 77.4
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 1.2e-208 729.9 473 77.4
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.6e-208 729.6 476 76.7
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 1.6e-208 729.6 476 76.5
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 2.1e-208 729.2 476 77.3
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 2.1e-208 729.2 473 77.6
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 3.5e-208 728.4 473 77.6
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 3.5e-208 728.4 476 76.7
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 4.6e-208 728.0 473 76.7
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 6.0e-208 727.6 470 77.4
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 6.0e-208 727.6 476 76.9
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 1.3e-207 726.5 470 77.9
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 3.9e-207 724.9 473 76.5
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 3.9e-207 724.9 476 76.9
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 3.9e-207 724.9 473 76.7
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 5.1e-207 724.5 473 77.0
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 6.7e-207 724.2 470 77.4
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 8.7e-207 723.8 476 76.9
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 1.1e-206 723.4 470 77.2
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 1.9e-206 722.6 473 76.1
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 1.9e-206 722.6 470 77.2
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 1.9e-206 722.6 473 75.9
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 3.3e-206 721.8 473 76.7
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 4.3e-206 721.5 476 76.1
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 7.4e-206 720.7 476 76.1
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 9.6e-206 720.3 473 76.1
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 1.6e-205 719.5 476 75.8
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 1.6e-205 719.5 476 75.8
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 1.6e-205 719.5 473 76.3
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 1.6e-205 719.5 476 76.1
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 2.1e-205 719.2 476 76.3
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 2.8e-205 718.8 476 75.8
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 3.7e-205 718.4 476 75.8
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 4.8e-205 718.0 476 75.6
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 8.2e-205 717.2 476 75.4
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 8.2e-205 717.2 470 77.0
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 8.2e-205 717.2 477 75.7
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 1.4e-204 716.5 476 75.4
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 1.4e-204 716.5 472 76.1
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 1.4e-204 716.5 478 76.2
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 2.4e-204 715.7 476 75.4
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 5.3e-204 714.5 476 75.2
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 9.0e-204 713.8 473 75.7
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 1.5e-203 713.0 476 74.4
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 2.0e-203 712.6 473 75.5
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 2.6e-203 712.2 490 73.1
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 2.6e-203 712.2 476 75.4
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 3.4e-203 711.8 477 74.2
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 4.5e-203 711.4 476 75.0
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 4.5e-203 711.4 477 74.2
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 4.5e-203 711.4 474 75.5
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 5.9e-203 711.1 477 75.5
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 7.6e-203 710.7 477 75.3
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 7.6e-203 710.7 477 75.3
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 1.7e-202 709.5 463 76.9
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.7e-202 709.5 476 75.0
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 3.8e-202 708.4 477 75.1
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 8.4e-202 707.2 503 72.8
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 2.5e-201 705.7 476 73.9
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 9.3e-201 703.7 476 74.4
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 1.3e-199 699.9 476 73.7
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 2.5e-198 695.7 472 74.4
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 2.8e-197 692.2 473 73.8
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 3.7e-197 691.8 473 73.4
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 1.8e-196 689.5 450 77.8
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 2.4e-196 689.1 470 74.3
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 1.5e-195 686.4 473 72.7
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 2.6e-195 685.6 452 76.8
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 1.3e-194 683.3 444 77.5
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 1.7e-194 682.9 587 63.4
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 2.9e-194 682.2 473 72.5
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 1.2e-192 676.8 452 75.9
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 2.0e-190 669.5 477 72.3
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 3.4e-187 658.7 480 69.4
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 3.8e-186 655.2 425 77.6
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 6.1e-184 647.9 422 76.8
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 1.0e-183 647.1 482 69.3
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 2.6e-179 632.5 468 68.6
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 3.5e-179 632.1 425 74.8
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 8.5e-178 627.5 473 69.3
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 8.5e-178 627.5 469 68.0
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 1.1e-177 627.1 476 66.2
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 2.6e-166 589.3 471 63.1
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.7e-165 586.6 470 63.2
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 1.6e-163 580.1 473 62.8
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 5.0e-162 575.1 449 62.8
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 4.2e-161 572.0 387 74.7
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 2.3e-151 539.7 467 58.7
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 3.4e-150 535.8 476 60.9
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 3.2e-148 529.3 454 62.6
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 4.9e-141 505.4 385 67.5
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.6e-139 498.8 377 70.0
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 2.1e-131 473.4 467 53.1
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 3.9e-122 442.6 231 91.3
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 2.1e-120 436.8 312 72.4
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 4.4e-118 429.1 325 68.0
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 7.8e-115 418.3 224 88.8
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 2.3e-114 416.8 434 51.8
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 9.9e-110 401.4 452 47.8
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 2.2e-101 373.6 226 80.5
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 1.1e-92 344.7 182 92.3
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.5e-73 281.2 484 37.6
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 7.4e-73 278.9 184 75.0
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 3.6e-67 260.0 179 72.1
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 2.6e-65 253.8 459 36.8
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 1.4e-58 231.5 141 78.7
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 2.3e-58 230.7 140 79.3
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 1.8e-55 221.1 124 83.1
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.4e-49 199.9 103 96.1
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 5.4e-23 113.2 129 51.2
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 3.3e-20 104.0 58 75.9


User provided reference genes

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