Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.2e-135 486.5 247 100.0
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 3.7e-100 368.6 245 79.6
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 3.1e-83 312.4 238 68.1
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 3.7e-76 288.9 237 68.4
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 7.8e-74 281.2 236 66.9
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 6.4e-60 235.0 239 55.2
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 4.1e-59 232.3 226 56.2
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.3e-52 210.7 222 54.1
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.7e-44 183.7 227 48.0
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.9e-44 183.0 242 46.3
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.9e-40 170.2 243 44.0
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 5.6e-40 168.7 274 39.1
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.1e-39 166.8 238 45.0
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.4e-38 164.1 220 44.5
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 5.3e-38 162.2 253 43.5
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.0e-37 160.2 225 45.3
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 3.4e-37 159.5 229 45.4
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 7.6e-37 158.3 229 45.4
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 9.9e-37 157.9 232 41.4
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 2.2e-36 156.8 231 45.9
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 2.9e-36 156.4 208 46.2
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 6.4e-36 155.2 215 48.4
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 1.1e-35 154.5 219 44.7
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 1.4e-35 154.1 236 41.5
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 9.3e-35 151.4 217 43.3
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.2e-34 151.0 225 44.0
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 1.6e-34 150.6 231 42.4
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.7e-34 149.8 225 40.0
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 3.5e-34 149.4 211 46.9
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 1.9e-32 143.7 227 43.6
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 7.3e-32 141.7 243 41.6
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 2.1e-31 140.2 226 42.5
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 2.8e-31 139.8 202 43.1
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.8e-30 137.1 206 42.7
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 4.0e-30 136.0 217 40.6
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 5.3e-30 135.6 202 42.6
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 5.3e-30 135.6 217 42.4
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 3.4e-29 132.9 216 41.2
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 5.8e-29 132.1 212 38.7
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.3e-28 131.0 214 38.8
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.7e-28 130.6 206 40.8
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 8.4e-28 128.3 221 38.0
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 1.1e-27 127.9 206 39.3
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 1.4e-27 127.5 240 38.8
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.9e-27 127.1 224 38.8
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 4.2e-27 125.9 222 37.4
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 5.5e-27 125.6 204 39.7
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 7.1e-27 125.2 279 36.9
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.2e-26 124.4 229 39.3
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 2.1e-26 123.6 204 40.2
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 2.7e-26 123.2 212 38.7
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.5e-26 122.9 222 38.7
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 3.5e-26 122.9 213 39.0
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 6.0e-26 122.1 206 38.3
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 6.0e-26 122.1 232 40.5
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.8e-25 120.6 226 38.5
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 2.3e-25 120.2 215 38.6
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.3e-25 120.2 120 50.8
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 2.3e-25 120.2 127 48.8
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 5.1e-25 119.0 216 37.0
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 5.1e-25 119.0 230 37.8
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 1.9e-24 117.1 180 40.0
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.9e-24 117.1 197 40.1
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 4.3e-24 115.9 250 34.0
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.3e-24 115.9 216 36.6
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 4.3e-24 115.9 224 38.8
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 7.4e-24 115.2 214 37.9
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 1.3e-23 114.4 211 36.0
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 2.8e-23 113.2 231 39.4
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 4.8e-23 112.5 217 35.5
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 4.8e-23 112.5 265 32.8
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 6.2e-23 112.1 209 35.4
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 6.2e-23 112.1 209 35.4
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 6.2e-23 112.1 202 33.7
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 6.2e-23 112.1 221 32.1
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 6.2e-23 112.1 245 38.0
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 6.2e-23 112.1 245 38.0
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 8.1e-23 111.7 235 37.4
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 8.1e-23 111.7 120 48.3
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 8.1e-23 111.7 224 33.0
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 1.1e-22 111.3 217 35.5
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 1.1e-22 111.3 220 37.3
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 2.4e-22 110.2 213 34.3
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 1.2e-21 107.8 188 36.2
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 2.0e-21 107.1 208 35.1
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 3.4e-21 106.3 245 35.9
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 4.5e-21 105.9 241 35.7
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 4.5e-21 105.9 186 36.6
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 5.8e-21 105.5 190 35.3
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 1.0e-20 104.8 238 36.6
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 1.0e-20 104.8 237 35.4
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 1.0e-20 104.8 237 35.4
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.0e-20 104.8 206 36.4
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.3e-20 104.4 204 34.8
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 2.9e-20 103.2 237 35.9
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 4.9e-20 102.4 201 31.8
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.1e-19 101.3 230 34.3
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 1.4e-19 100.9 229 34.1
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 1.4e-19 100.9 238 34.9
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 2.5e-19 100.1 223 35.9
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 2.5e-19 100.1 192 35.4
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 4.2e-19 99.4 200 33.0
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 4.2e-19 99.4 191 37.2
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 4.2e-19 99.4 232 33.2
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 7.1e-19 98.6 238 34.5
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.2e-18 97.8 205 34.1
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 1.6e-18 97.4 235 34.9
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 2.1e-18 97.1 236 36.4
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 2.1e-18 97.1 236 36.0
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 4.6e-18 95.9 188 37.2
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 6.0e-18 95.5 231 33.3
Oeu049982.1 Olea europaea HOM05D003792 ORTHO05D003195 6.0e-18 95.5 186 37.1
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 6.0e-18 95.5 225 33.8
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 1.0e-17 94.7 185 34.1
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.3e-17 94.4 231 32.9
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 5.1e-17 92.4 229 34.9
HanXRQChr05g0150801 Helianthus annuus HOM05D003792 ORTHO05D003195 5.1e-17 92.4 225 32.0
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 1.1e-16 91.3 236 33.9
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 1.1e-16 91.3 236 34.3
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 1.1e-16 91.3 236 34.3
SalBow7G2289 Salvia bowleyana HOM05D003792 ORTHO05D003195 1.1e-16 91.3 223 30.9
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 1.5e-16 90.9 215 31.2
vmacro04447 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.5e-16 90.9 229 31.4
BcaC06g31740 Brassica carinata HOM05D003792 ORTHO05D003195 5.7e-16 89.0 210 35.2
Aqoxy5G01231 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 7.4e-16 88.6 227 32.2
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 1.6e-15 87.4 91 46.2
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 2.1e-15 87.0 234 32.5
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 4.8e-15 85.9 102 39.2
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 6.3e-15 85.5 220 31.8
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 3.1e-14 83.2 225 32.9
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 4.1e-14 82.8 124 40.3
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 9.0e-14 81.6 215 32.6
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 9.0e-14 81.6 238 30.3
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 1.5e-13 80.9 236 35.2
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 2.0e-13 80.5 173 32.4
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 3.4e-13 79.7 227 31.7
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 4.5e-13 79.3 251 28.7
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 4.5e-13 79.3 238 29.8
Potri.009G101400 Populus trichocarpa HOM05D003792 ORTHO05D003195 4.5e-13 79.3 227 32.6
CARHR181240 Cardamine hirsuta HOM05D003792 ORTHO05D003195 5.9e-13 79.0 210 33.8
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 5.9e-13 79.0 184 32.6
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 7.6e-13 78.6 203 34.5
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 1.3e-12 77.8 154 33.8
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 1.3e-12 77.8 206 34.0
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.7e-12 77.4 146 35.6
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.2e-12 77.0 234 32.1
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 2.2e-12 77.0 230 30.0
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 8.4e-12 75.1 231 30.3
Lj5C209G18 Lonicera japonica HOM05D003792 ORTHO05D003195 8.4e-12 75.1 178 33.7
Os03g0184100 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 1.4e-11 74.3 215 31.2
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 1.4e-11 74.3 232 32.3
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 2.5e-11 73.6 159 37.1
THA.LOC104814167 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 2.5e-11 73.6 238 33.2
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 3.2e-11 73.2 242 30.2
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 5.5e-11 72.4 202 30.2
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 9.3e-11 71.6 229 28.8
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 9.3e-11 71.6 109 37.6
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 1.6e-10 70.9 190 33.2
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 2.1e-10 70.5 217 31.8
Sabra09G0077200 Salix brachista HOM05D003792 ORTHO05D003195 2.7e-10 70.1 233 32.6
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 7.9e-10 68.6 203 31.0
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 7.9e-10 68.6 205 32.2
C09p25480 Brassica napus HOM05D003792 ORTHO05D003195 1.8e-09 67.4 218 33.9
arahy.Tifrunner.gnm1.ann1.I5Q2RG Arachis hypogaea HOM05D003792 ORTHO05D003195 8.7e-09 65.1 214 27.6
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 1.5e-08 64.3 228 31.1
SEGI_40396 Sequoiadendron giganteum HOM05D003792 ORTHO05D003195 2.5e-08 63.5 162 31.5
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 4.3e-08 62.8 200 28.0
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 4.3e-08 62.8 240 30.0
Psat7g125520 Pisum sativum HOM05D003792 ORTHO05D003195 7.4e-08 62.0 207 29.5
arahy.Tifrunner.gnm1.ann1.SW5XY7 Arachis hypogaea HOM05D003792 ORTHO05D003195 2.2e-07 60.5 214 27.1
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 3.7e-07 59.7 244 27.0
Potri.004G140701 Populus trichocarpa HOM05D003792 ORTHO05D003195 6.3e-07 58.9 231 29.0
AUR62042730 Chenopodium quinoa HOM05D043499 ORTHO05D003195 8.2e-07 58.5 223 28.7
SGA_v2.0_scaffold14G07003 Striga asiatica HOM05D000207 ORTHO05D000606 1.1e-06 58.2 106 36.8
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 1.1e-06 58.2 212 30.2
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 1.4e-06 57.8 230 29.6
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 2.4e-06 57.0 104 35.6
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 2.4e-06 57.0 182 28.0
SEGI_08793 Sequoiadendron giganteum HOM05D019663 ORTHO05D003195 2.4e-06 57.0 141 29.1
ATR0988G008 Amborella trichopoda HOM05D003792 ORTHO05D003195 9.0e-06 55.1 226 27.0
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 9.0e-06 55.1 203 29.1


User provided reference genes

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