Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21347 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.7e-110 402.5 185 100.0
vmacro23398 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.3e-57 226.9 170 71.8
Actinidia11005 Actinidia chinensis HOM05D003155 ORTHO05D004342 5.7e-53 211.5 169 63.9
Hma1.2p1_1785F.1_g302280 Hydrangea macrophylla HOM05D003155 ORTHO05D004342 1.3e-52 210.3 152 71.7
Peaxi162Scf00066g00524 Petunia axillaris HOM05D003155 ORTHO05D004342 2.1e-52 209.5 151 70.9
Oeu040091.1 Olea europaea HOM05D003155 ORTHO05D004342 3.7e-52 208.8 159 67.9
MSTRG.7527 Avicennia marina HOM05D003155 ORTHO05D004342 4.8e-52 208.4 155 69.0
PSO541G5346 Papaver somniferum HOM05D003155 ORTHO05D004342 6.3e-52 208.0 151 70.9
CSS0028730 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 8.2e-52 207.6 170 63.5
Peaxi162Scf00591g00412 Petunia axillaris HOM05D003155 ORTHO05D004342 8.2e-52 207.6 151 69.5
Solyc04g058090.3 Solanum lycopersicum HOM05D003155 ORTHO05D004342 1.4e-51 206.8 151 69.5
Sopen04g025920 Solanum pennellii HOM05D003155 ORTHO05D004342 1.4e-51 206.8 151 69.5
SGA_v2.0_scaffold1G00231 Striga asiatica HOM05D003155 ORTHO05D004342 1.4e-51 206.8 155 68.4
CAN.G630.85 Capsicum annuum HOM05D003155 ORTHO05D004342 1.8e-51 206.5 151 69.5
Manes.01G225900 Manihot esculenta HOM05D003155 ORTHO05D004342 1.8e-51 206.5 156 69.9
Manes.05G001800 Manihot esculenta HOM05D003155 ORTHO05D004342 2.4e-51 206.1 151 71.5
Nitab4.5_0000317g0060 Nicotiana tabacum HOM05D003155 ORTHO05D004342 2.4e-51 206.1 151 69.5
Nitab4.5_0002557g0030 Nicotiana tabacum HOM05D003155 ORTHO05D004342 2.4e-51 206.1 151 69.5
DCAR_027274 Daucus carota HOM05D003155 ORTHO05D004342 3.1e-51 205.7 155 67.1
PGSC0003DMG400023032 Solanum tuberosum HOM05D003155 ORTHO05D004342 3.1e-51 205.7 151 68.9
TAR362G0957 Trochodendron aralioides HOM05D003155 ORTHO05D004342 3.1e-51 205.7 151 70.2
CSS0047504 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 5.3e-51 204.9 170 62.9
CsaV3_5G001710 Cucumis sativus L. HOM05D003155 ORTHO05D004342 5.3e-51 204.9 151 69.5
FAN26G2094 Fragaria x ananassa HOM05D003155 ORTHO05D004342 5.3e-51 204.9 151 70.2
MBI19_g29997_MAGBIO Magnolia biondii HOM05D003155 ORTHO05D004342 5.3e-51 204.9 152 69.7
SalBow8G2165 Salvia bowleyana HOM05D003155 ORTHO05D004342 5.3e-51 204.9 155 69.0
Cc11_g04240 Coffea canephora HOM05D003155 ORTHO05D004342 6.9e-51 204.5 155 66.5
DCAR_024227 Daucus carota HOM05D003155 ORTHO05D004342 6.9e-51 204.5 155 67.1
FvH4_1g23040 Fragaria vesca HOM05D003155 ORTHO05D004342 6.9e-51 204.5 151 70.2
FAN19G1072 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.9e-51 204.5 151 70.2
RcHm_v2.0_Chr2g0117751 Rosa chinensis HOM05D003155 ORTHO05D004342 9.0e-51 204.1 156 68.6
Thecc.01G310300 Theobroma cacao HOM05D003155 ORTHO05D004342 9.0e-51 204.1 152 70.4
Gohir.A11G111100 Gossypium hirsutum HOM05D003155 ORTHO05D004342 1.2e-50 203.8 156 69.2
SalBow2G2017 Salvia bowleyana HOM05D003155 ORTHO05D004342 1.2e-50 203.8 155 68.4
SGA_v2.0_scaffold223G42841 Striga asiatica HOM05D003155 ORTHO05D004342 1.2e-50 203.8 152 68.4
Gohir.D11G116300 Gossypium hirsutum HOM05D003155 ORTHO05D004342 2.0e-50 203.0 155 68.4
Gorai.007G124500 Gossypium raimondii HOM05D003155 ORTHO05D004342 2.0e-50 203.0 155 68.4
Cc00_g15210 Coffea canephora HOM05D003155 ORTHO05D004342 2.6e-50 202.6 161 64.6
FAN23G2124 Fragaria x ananassa HOM05D003155 ORTHO05D004342 2.6e-50 202.6 151 69.5
Lj4g0014336 Lotus japonicus HOM05D003155 ORTHO05D004342 2.6e-50 202.6 151 66.2
COL.COLO4_23262 Corchorus olitorius HOM05D003155 ORTHO05D004342 4.5e-50 201.8 152 69.7
PSO675G7447 Papaver somniferum HOM05D003155 ORTHO05D004342 5.9e-50 201.4 151 68.9
Sed0004341 Sechium edule HOM05D003155 ORTHO05D004342 5.9e-50 201.4 151 68.9
MELO3C005781.2 Cucumis melo HOM05D003155 ORTHO05D004342 7.6e-50 201.1 151 68.9
arahy.Tifrunner.gnm1.ann1.PM89VL Arachis hypogaea HOM05D003155 ORTHO05D004342 1.0e-49 200.7 151 66.9
EL10Ac9g21469 Beta vulgaris HOM05D003155 ORTHO05D004342 1.0e-49 200.7 151 68.2
Lj3A1064T100 Lonicera japonica HOM05D003155 ORTHO05D004342 1.0e-49 200.7 155 67.1
TAR362G0238 Trochodendron aralioides HOM05D003155 ORTHO05D004342 1.0e-49 200.7 151 68.2
arahy.Tifrunner.gnm1.ann1.DJPQ45 Arachis hypogaea HOM05D003155 ORTHO05D004342 1.3e-49 200.3 151 66.9
ClCG01G001560 Citrullus lanatus HOM05D003155 ORTHO05D004342 1.3e-49 200.3 151 68.9
ECA246G1648 Erigeron canadensis HOM05D003155 ORTHO05D001887 1.3e-49 200.3 155 65.8
Hund06387 Selenicereus undatus HOM05D003155 ORTHO05D004342 1.3e-49 200.3 151 67.5
CDE11G0169 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 1.7e-49 199.9 151 66.2
Migut.M01874 Erythranthe guttata HOM05D003155 ORTHO05D004342 1.7e-49 199.9 151 68.9
MD05G1254600 Malus domestica HOM05D003155 ORTHO05D004342 2.2e-49 199.5 152 67.1
MD08G1193800 Malus domestica HOM05D003155 ORTHO05D004342 2.2e-49 199.5 152 66.4
MD08G1195100 Malus domestica HOM05D003155 ORTHO05D004342 2.2e-49 199.5 152 66.4
GSVIVG01028086001 Vitis vinifera HOM05D003155 ORTHO05D004342 2.2e-49 199.5 151 70.2
ECA248G1812 Erigeron canadensis HOM05D003155 ORTHO05D004342 2.9e-49 199.1 179 59.2
Nn3g21630 Nelumbo nucifera HOM05D003155 ORTHO05D004342 2.9e-49 199.1 152 68.4
HanXRQChr17g0540071 Helianthus annuus HOM05D003155 ORTHO05D004342 3.8e-49 198.7 155 65.2
Prupe.1G528600 Prunus persica HOM05D003155 ORTHO05D004342 3.8e-49 198.7 155 66.5
Duzib138G0641 Durio zibethinus HOM05D003155 ORTHO05D004342 5.0e-49 198.4 152 68.4
HanXRQChr06g0174841 Helianthus annuus HOM05D003155 ORTHO05D004342 5.0e-49 198.4 155 65.8
MD15G1382400 Malus domestica HOM05D003155 ORTHO05D004342 5.0e-49 198.4 151 67.5
Potri.002G198600 Populus trichocarpa HOM05D003155 ORTHO05D004342 5.0e-49 198.4 156 66.7
VMungo0251G2281 Vigna mungo HOM05D003155 ORTHO05D004342 5.0e-49 198.4 151 66.9
Eucgr.L02454 Eucalyptus grandis HOM05D003155 ORTHO05D004342 6.5e-49 198.0 151 66.9
FAN28G3015 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.5e-49 198.0 155 67.7
MD08G1194700 Malus domestica HOM05D003155 ORTHO05D004342 6.5e-49 198.0 151 67.5
Oeu008950.2 Olea europaea HOM05D003155 ORTHO05D004342 6.5e-49 198.0 156 67.3
Hund00057 Selenicereus undatus HOM05D003155 ORTHO05D004342 6.5e-49 198.0 151 66.9
THA.LOC104817470 Tarenaya hassleriana HOM05D003155 ORTHO05D004342 6.5e-49 198.0 155 65.8
Aqoxy5G00145 Aquilegia oxysepala HOM05D003155 ORTHO05D004342 8.5e-49 197.6 156 65.4
Cfa005838 Carpinus fangiana HOM05D003155 ORTHO05D004342 8.5e-49 197.6 167 63.5
Eucgr.A02767 Eucalyptus grandis HOM05D003155 ORTHO05D004342 8.5e-49 197.6 151 66.9
Lj5g0009987 Lotus japonicus HOM05D003155 ORTHO05D004342 8.5e-49 197.6 152 65.8
MD15G1382500 Malus domestica HOM05D003155 ORTHO05D004342 8.5e-49 197.6 152 66.4
Glyma.05G192900 Glycine max HOM05D003155 ORTHO05D004342 1.1e-48 197.2 151 66.2
Potri.014G123000 Populus trichocarpa HOM05D003155 ORTHO05D004342 1.1e-48 197.2 155 67.7
CARHR165020 Cardamine hirsuta HOM05D003155 ORTHO05D004342 1.4e-48 196.8 155 64.5
Sabra02G0159100 Salix brachista HOM05D003155 ORTHO05D004342 1.9e-48 196.4 156 64.7
Aa31sc33G80 Aethionema arabicum HOM05D003155 ORTHO05D004342 2.5e-48 196.1 151 65.6
BcaB02g07704 Brassica carinata HOM05D003155 ORTHO05D004342 2.5e-48 196.1 170 59.4
Lsat_1_v5_gn_3_29341 Lactuca sativa HOM05D003155 ORTHO05D004342 2.5e-48 196.1 158 65.2
Lalb_Chr08g0238231 Lupinus albus HOM05D003155 ORTHO05D004342 2.5e-48 196.1 151 64.9
Os03g0831500 Oryza sativa ssp. japonica HOM05D003155 ORTHO05D004342 2.5e-48 196.1 156 66.0
CANSAT25G1273 Cannabis sativa HOM05D003155 ORTHO05D004342 3.2e-48 195.7 151 66.2
MD08G1194300 Malus domestica HOM05D003155 ORTHO05D004342 4.2e-48 195.3 151 66.2
Phvul.002G273500 Phaseolus vulgaris HOM05D003155 ORTHO05D004342 4.2e-48 195.3 151 64.9
Sc08g0003390 Simmondsia chinensis HOM05D003155 ORTHO05D004342 4.2e-48 195.3 151 68.9
A09p48030 Brassica napus HOM05D003155 ORTHO05D004342 5.5e-48 194.9 151 64.2
C06p22560 Brassica napus HOM05D003155 ORTHO05D004342 5.5e-48 194.9 151 64.2
C08p30250 Brassica napus HOM05D003155 ORTHO05D004342 5.5e-48 194.9 151 64.2
BolC8t50632H Brassica oleracea HOM05D003155 ORTHO05D004342 5.5e-48 194.9 151 64.2
BraA09t40256Z Brassica rapa HOM05D003155 ORTHO05D004342 5.5e-48 194.9 151 64.2
Cpa.g.sc8.158 Carica papaya HOM05D003155 ORTHO05D004342 7.2e-48 194.5 151 64.9
BcaC08g44717 Brassica carinata HOM05D003155 ORTHO05D004342 9.3e-48 194.1 151 64.2
BolC6t37446H Brassica oleracea HOM05D003155 ORTHO05D004342 9.3e-48 194.1 151 64.2
BraA07t29916Z Brassica rapa HOM05D003155 ORTHO05D004342 9.3e-48 194.1 151 64.2
Haze_05010 Corylus avellana HOM05D003155 ORTHO05D004342 9.3e-48 194.1 168 62.5
A07p22400 Brassica napus HOM05D003155 ORTHO05D004342 1.2e-47 193.7 151 63.6
TPR.G37349 Trifolium pratense HOM05D003155 ORTHO05D004342 1.2e-47 193.7 151 64.2
Atru.chr10.1937 Acer truncatum HOM05D003155 ORTHO05D004342 1.6e-47 193.4 151 66.2
TWI09G1633 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 1.6e-47 193.4 147 66.0
Ca_22781_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 2.1e-47 193.0 151 62.9
Thhalv10010436m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 2.1e-47 193.0 151 63.6
Glyma.08G001000 Glycine max HOM05D003155 ORTHO05D004342 2.7e-47 192.6 151 64.9
Ca_14922_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 3.6e-47 192.2 151 62.3
Medtr8g093860 Medicago truncatula HOM05D003155 ORTHO05D004342 3.6e-47 192.2 151 64.2
Carub.0005s2164 Capsella rubella HOM05D003155 ORTHO05D004342 4.6e-47 191.8 152 64.5
PGR119G0649 Punica granatum HOM05D003155 ORTHO05D004342 4.6e-47 191.8 167 59.9
TWI53G1268 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 6.1e-47 191.4 147 64.6
TWI53G1422 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 6.1e-47 191.4 147 64.6
Sp5g07410 Schrenkiella parvula HOM05D003155 ORTHO05D004342 7.9e-47 191.0 151 62.9
CiPaw.13G147200 Carya illinoinensis HOM05D003155 ORTHO05D004342 1.0e-46 190.7 155 62.6
AUR62013115 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.0e-46 190.7 151 66.9
HPP92_001922 Vanilla planifolia HOM05D003155 ORTHO05D004342 1.0e-46 190.7 150 67.3
AUR62010120 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.3e-46 190.3 151 66.9
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 1.8e-46 189.9 147 65.3
AL5G36130 Arabidopsis lyrata HOM05D003155 ORTHO05D004342 1.8e-46 189.9 155 61.9
AT3G55010 Arabidopsis thaliana HOM05D003155 ORTHO05D004342 1.8e-46 189.9 151 62.3
ATR0693G061 Amborella trichopoda HOM05D003155 ORTHO05D004342 3.0e-46 189.1 162 63.6
Cfa005833 Carpinus fangiana HOM05D003155 ORTHO05D004342 5.1e-46 188.3 151 65.6
Lalb_Chr11g0068521 Lupinus albus HOM05D003155 ORTHO05D004342 5.1e-46 188.3 151 62.3
PGR066G0004 Punica granatum HOM05D003155 ORTHO05D004342 5.1e-46 188.3 155 63.2
PGR142G1043 Punica granatum HOM05D003155 ORTHO05D004342 5.1e-46 188.3 155 63.2
SEGI_27039 Sequoiadendron giganteum HOM05D003155 ORTHO05D004342 5.1e-46 188.3 152 63.8
Psat7g045040 Pisum sativum HOM05D003155 ORTHO05D004342 1.1e-45 187.2 151 62.3
QL05p045478 Quercus lobata HOM05D003155 ORTHO05D004342 3.3e-45 185.7 156 62.8
unitig_37.g12904 Utricularia gibba HOM05D003155 ORTHO05D004342 5.7e-45 184.9 155 60.6
MD08G1195000 Malus domestica HOM05D003155 ORTHO05D004342 7.4e-45 184.5 158 60.8
Zm00001eb284260 Zea mays HOM05D003155 ORTHO05D004342 2.8e-44 182.6 152 64.5
RcHm_v2.0_Chr7g0218451 Rosa chinensis HOM05D003155 ORTHO05D004342 4.8e-44 181.8 155 61.3
Sp5g14230 Schrenkiella parvula HOM05D003155 ORTHO05D004342 4.8e-44 181.8 151 60.3
Pp3c6_25750 Physcomitrium patens HOM05D003155 ORTHO05D004342 8.2e-44 181.0 151 57.6
Mapoly0003s0273 Marchantia polymorpha HOM05D003155 ORTHO05D004342 1.1e-43 180.6 151 62.9
PGSC0003DMG400027622 Solanum tuberosum HOM05D003155 ORTHO05D004342 1.1e-43 180.6 157 60.5
Pp3c5_3030 Physcomitrium patens HOM05D003155 ORTHO05D004342 1.4e-43 180.3 151 58.3
Atru.chr10.1938 Acer truncatum HOM05D003155 ORTHO05D004342 2.4e-43 179.5 145 63.4
CDE05G1659 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 2.4e-43 179.5 165 59.4
Thhalv10018710m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 5.3e-43 178.3 151 59.6
vmacro12338 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.2e-42 177.2 129 72.1
SMO116G0007 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 2.0e-42 176.4 152 57.9
RcHm_v2.0_Chr2g0117621 Rosa chinensis HOM05D003155 ORTHO05D004342 5.0e-41 171.8 161 59.0
Dinv33099 Davidia involucrata HOM05D003155 ORTHO05D004342 5.5e-40 168.3 132 68.2
CDE05G2880 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 9.4e-40 167.5 110 70.0
CBR_g16871 Chara braunii HOM05D003155 ORTHO05D004342 5.7e-37 158.3 153 54.2
AagrBONN_evm.TU.Sc2ySwM_368.880 Anthoceros agrestis HOM05D003155 ORTHO05D004342 9.7e-37 157.5 151 51.7
SMO232G0073 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 9.7e-37 157.5 151 51.7
Cre07.g318750 Chlamydomonas reinhardtii HOM05D003155 ORTHO05D004342 4.1e-35 152.1 152 49.3
CARHR047360 Cardamine hirsuta HOM05D003155 ORTHO05D004342 9.1e-35 151.0 152 51.3
CSS0042611 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 2.9e-33 146.0 105 65.7
PRCOL_00001570 Prasinoderma coloniale HOM05D003155 ORTHO05D004342 3.8e-33 145.6 151 45.7
Lsat_1_v5_gn_8_28960 Lactuca sativa HOM05D003155 ORTHO05D004342 3.9e-30 135.6 124 60.5
RcHm_v2.0_Chr5g0056581 Rosa chinensis HOM05D003155 ORTHO05D004342 2.2e-28 129.8 138 58.7
TPR.G31811 Trifolium pratense HOM05D003155 ORTHO05D004342 3.7e-28 129.0 129 54.3
Medtr5g093890 Medicago truncatula HOM05D003155 ORTHO05D004342 8.2e-28 127.9 81 70.4
Lsat_1_v5_gn_0_24560 Lactuca sativa HOM05D003155 ORTHO05D004342 2.0e-26 123.2 92 66.3
Lsat_1_v5_gn_3_120781 Lactuca sativa HOM05D003155 ORTHO05D004342 2.0e-26 123.2 92 66.3
Lsat_1_v5_gn_4_175621 Lactuca sativa HOM05D003155 ORTHO05D004342 2.0e-26 123.2 92 66.3
Lsat_1_v5_gn_5_90561 Lactuca sativa HOM05D003155 ORTHO05D004342 2.0e-26 123.2 92 66.3
Lsat_1_v5_gn_6_3740 Lactuca sativa HOM05D003155 ORTHO05D004342 2.0e-26 123.2 92 66.3
Lsat_1_v5_gn_9_22280 Lactuca sativa HOM05D003155 ORTHO05D004342 3.5e-26 122.5 92 65.2
CARHR165030 Cardamine hirsuta HOM05D003155 ORTHO05D004342 1.0e-25 120.9 151 46.4
RcHm_v2.0_Chr5g0059271 Rosa chinensis HOM05D003155 ORTHO05D004342 2.9e-25 119.4 78 71.8
BcaNung04653 Brassica carinata HOM05D003155 ORTHO05D004342 1.5e-24 117.1 102 63.7
Lj6C819T16 Lonicera japonica HOM05D003155 ORTHO05D004342 3.2e-24 115.9 151 45.7
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 1.8e-22 110.2 147 40.8
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.2e-21 107.5 144 42.4
Cfa005835 Carpinus fangiana HOM05D003155 ORTHO05D004342 7.5e-21 104.8 151 46.4
Sabra14G0091400 Salix brachista HOM05D003155 ORTHO05D004342 7.0e-19 98.2 58 77.6
AagrBONN_evm.TU.Sc2ySwM_368.885 Anthoceros agrestis HOM05D003155 ORTHO05D004342 8.5e-17 91.3 74 52.7
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 9.4e-16 87.8 65 63.1
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 6.8e-14 81.6 96 46.9
GSVIVG01011409001 Vitis vinifera HOM05D003155 ORTHO05D004342 6.8e-14 81.6 86 59.3
SMO232G0017 Selaginella moellendorffii HOM05D003155 ORTHO05D379129 5.7e-13 78.6 153 32.7
CAN.G405.2 Capsicum annuum HOM05D003155 ORTHO05D004342 2.4e-11 73.2 81 53.1
Dinv10071 Davidia involucrata HOM05D003155 ORTHO05D004342 5.4e-11 72.0 50 66.0
Zm00001eb115440 Zea mays HOM05D003155 ORTHO05D004342 5.9e-10 68.6 78 56.4
CiPaw.07G115200 Carya illinoinensis HOM05D003155 ORTHO05D004342 8.6e-09 64.7 57 59.6
CSS0004103 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 4.2e-08 62.4 31 93.5
CBR_g46846 Chara braunii HOM05D003155 ORTHO05D131586 9.5e-08 61.2 66 47.0
Dinv10072 Davidia involucrata HOM05D003155 ORTHO05D004342 9.5e-08 61.2 31 93.5
TPR.G14992 Trifolium pratense HOM05D003155 ORTHO05D410879 1.8e-06 57.0 31 83.9


User provided reference genes

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