Gene: Solyc04g058090.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g058090.3
  • Transcript Identifier Solyc04g058090.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 54517644-54521708 : negative

Gene Family Information

  • ID HOM05D003155
  • #Genes/#Species 216/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g058090.3.1
  • uniprot A0A3Q7G5K0
  • gene_id Solyc04g058090

Descriptions

  • Description Phosphoribosylformylglycinamidine cyclo-ligase (AHRD V3.3 *** A0A1U8G9K5_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006189
IEA
GOA Database'de novo' IMP biosynthetic process
GO:0006189
IEA
InterPro'de novo' IMP biosynthetic process
GO:0046084
IBA
GOA Databaseadenine biosynthetic process
GO:0006164
IBA
GOA Databasepurine nucleotide biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004641
IBA
IEA
GOA Databasephosphoribosylformylglycinamidine cyclo-ligase activity
GO:0004641
IEA
InterProphosphoribosylformylglycinamidine cyclo-ligase activity
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0004637
IBA
GOA Databasephosphoribosylamine-glycine ligase activity
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT3G55010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G55010
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G55010
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G55010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016188 PurM-like, N-terminal domain
IPR036921 PurM-like, N-terminal domain superfamily
IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase
IPR036676 PurM-like, C-terminal domain superfamily
IPR010918 PurM-like, C-terminal domain
Mapman id Description
6.1.1.5 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN synthase