Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 0.0e+00 1122.1 546 100.0
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 6.1e-196 688.0 457 74.8
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 4.8e-177 625.2 401 72.3
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 3.5e-175 619.0 445 68.3
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 2.2e-174 616.3 391 72.1
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 4.2e-173 612.1 441 65.1
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 4.2e-173 612.1 351 82.9
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.8e-171 606.7 394 70.6
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 2.3e-171 606.3 458 67.7
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 9.8e-170 600.9 456 63.6
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 9.8e-170 600.9 397 70.0
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 1.7e-169 600.1 393 71.8
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 1.1e-168 597.4 414 67.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 9.2e-168 594.3 394 71.3
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 3.5e-167 592.4 395 71.4
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 5.9e-167 591.7 425 65.9
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 7.8e-167 591.3 393 70.7
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 2.3e-166 589.7 397 68.8
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 2.3e-166 589.7 397 70.0
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 1.1e-165 587.4 427 66.3
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.1e-165 587.4 392 69.9
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 1.1e-165 587.4 396 70.5
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 2.5e-165 586.3 392 69.1
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 2.5e-165 586.3 397 68.8
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 2.5e-165 586.3 394 68.3
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 9.5e-165 584.3 396 69.2
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 9.5e-165 584.3 391 71.1
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.6e-164 583.6 396 67.9
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 1.6e-164 583.6 395 69.6
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 2.1e-164 583.2 447 63.8
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 4.0e-163 578.9 396 69.2
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 5.2e-163 578.6 391 68.3
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 5.2e-163 578.6 413 65.1
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 8.9e-163 577.8 450 62.7
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 8.9e-163 577.8 398 67.1
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 1.2e-162 577.4 474 61.2
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 1.2e-162 577.4 390 68.7
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 1.2e-162 577.4 395 68.9
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 1.5e-162 577.0 507 58.4
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 2.6e-162 576.2 414 65.2
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 2.6e-162 576.2 392 67.6
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 9.8e-162 574.3 427 64.2
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 1.7e-161 573.5 393 68.4
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 8.3e-161 571.2 430 62.6
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 1.1e-160 570.9 400 66.5
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 7.0e-160 568.2 427 63.9
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.2e-159 567.4 431 61.3
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 1.2e-159 567.4 440 63.0
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 1.6e-159 567.0 401 68.1
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 3.5e-159 565.8 456 59.4
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 3.5e-159 565.8 395 66.6
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 3.5e-159 565.8 396 67.4
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.9e-159 565.1 427 63.7
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.0e-158 564.3 427 63.2
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 1.3e-158 563.9 401 65.8
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 1.7e-158 563.5 401 65.3
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 2.3e-158 563.1 436 62.2
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 3.9e-158 562.4 398 67.1
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 6.6e-158 561.6 401 66.8
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 5.6e-157 558.5 439 62.9
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 7.3e-157 558.1 455 59.6
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 7.3e-157 558.1 394 65.0
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 9.5e-157 557.8 455 59.3
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 1.2e-156 557.4 446 62.3
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 2.8e-156 556.2 438 62.1
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 2.8e-156 556.2 400 66.8
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 1.0e-155 554.3 401 66.1
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 1.4e-155 553.9 396 67.9
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 2.3e-155 553.1 426 64.1
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 2.0e-154 550.1 374 70.3
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 9.8e-154 547.7 401 64.8
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 1.7e-153 547.0 431 61.9
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.7e-153 547.0 405 64.4
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 1.7e-153 547.0 429 59.9
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.7e-153 547.0 397 66.0
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 4.9e-153 545.4 393 65.6
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 1.1e-152 544.3 404 64.1
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 1.1e-152 544.3 404 64.1
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 2.4e-152 543.1 397 64.5
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 4.6e-151 538.9 396 64.6
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 1.3e-150 537.3 389 66.1
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 5.0e-150 535.4 400 65.5
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.1e-148 530.0 464 59.7
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 2.6e-146 523.1 432 57.9
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 5.8e-146 521.9 396 62.4
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 7.5e-146 521.5 441 60.1
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 4.1e-144 515.8 395 62.8
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 1.6e-143 513.8 365 66.0
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 3.3e-141 506.1 375 62.9
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.4e-139 500.0 349 68.2
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 1.3e-137 494.2 454 52.4
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 2.8e-132 476.5 344 67.7
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.1e-131 473.0 331 66.2
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 7.6e-130 468.4 317 67.8
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 1.9e-128 463.8 394 55.8
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 5.1e-126 455.7 391 55.2
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 4.3e-125 452.6 424 52.1
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.0e-122 443.7 390 51.8
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.7e-119 433.3 390 50.5
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 3.7e-116 422.9 408 51.0
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 5.3e-115 419.1 357 58.8
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 7.1e-112 408.7 439 46.2
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 2.7e-111 406.8 227 83.3
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 8.4e-105 385.2 285 66.7
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 4.3e-101 372.9 307 61.9
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 1.9e-88 330.9 388 45.1
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 5.5e-80 302.8 391 43.5
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 4.4e-77 293.1 242 62.4
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.5e-74 283.5 399 43.9
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.3e-65 255.0 186 63.4
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 5.4e-59 233.0 224 52.7
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.0e-53 214.5 235 45.5
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 3.1e-51 207.2 494 29.6
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.0e-45 188.0 130 63.8
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.9e-33 147.1 110 59.1
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 2.5e-24 117.9 90 63.3
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 2.1e-23 114.8 62 82.3
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 8.1e-23 112.8 62 82.3
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 2.9e-20 104.4 230 30.0
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.2e-18 99.0 64 70.3
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 2.7e-18 97.8 86 53.5
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 2.1e-15 88.2 64 57.8
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 9.0e-14 82.8 45 77.8
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 1.2e-13 82.4 51 70.6
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.7e-10 71.2 52 53.8
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 8.7e-09 66.2 74 54.1


User provided reference genes

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