Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 0.0e+00 1777.3 894 100.0
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 0.0e+00 1117.4 787 74.7
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 3.9e-240 835.5 788 57.2
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.1e-237 827.4 631 67.2
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 6.6e-232 808.1 689 62.4
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.1e-223 780.8 782 55.0
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.1e-221 774.2 792 53.4
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 5.2e-221 771.9 790 53.9
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 5.2e-221 771.9 801 53.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.4e-218 763.8 788 54.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 2.7e-217 759.6 789 53.4
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.6e-214 749.2 786 51.8
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.6e-212 743.0 787 52.9
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.4e-210 737.3 793 51.7
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.9e-210 736.9 802 51.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 2.4e-210 736.5 746 54.7
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.2e-210 735.7 793 51.2
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.3e-206 724.2 789 52.0
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 4.8e-206 722.2 791 50.9
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.4e-205 720.7 789 51.8
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.8e-205 720.3 788 50.8
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 4.0e-205 719.2 727 53.5
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.5e-204 717.2 787 51.5
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 2.6e-204 716.5 787 50.2
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.3e-203 714.1 795 50.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 2.2e-203 713.4 789 50.3
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 3.8e-203 712.6 792 50.3
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.9e-202 710.3 792 50.1
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 5.5e-202 708.8 737 52.2
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 5.5e-202 708.8 723 53.1
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 7.1e-202 708.4 790 50.3
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 7.1e-202 708.4 790 49.2
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 8.7e-200 701.4 723 53.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 7.4e-199 698.4 787 50.3
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.3e-198 697.6 739 51.0
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.6e-198 697.2 614 61.7
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.7e-198 696.0 793 48.9
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 5.3e-197 692.2 794 49.5
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 9.0e-197 691.4 791 50.1
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.5e-196 690.6 789 49.2
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.6e-196 689.9 789 49.0
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.8e-196 688.7 789 49.0
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-195 687.6 789 49.0
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.7e-195 687.2 771 49.4
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.2e-195 686.8 755 50.3
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.1e-194 684.5 753 50.1
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.6e-193 680.6 792 49.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 2.1e-193 680.2 787 49.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 4.6e-193 679.1 791 49.6
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-192 677.9 807 47.8
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.8e-192 677.2 794 49.4
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 3.3e-191 672.9 639 54.0
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.8e-189 667.2 614 59.9
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 2.9e-187 659.8 744 50.0
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 8.7e-184 648.3 640 55.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 2.8e-182 643.3 624 57.5
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.4e-178 630.9 805 46.2
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.9e-178 630.6 731 47.5
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.6e-177 626.3 648 52.3
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.9e-176 622.9 770 49.1
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.7e-176 622.1 761 46.9
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 5.7e-175 619.0 791 46.5
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 2.2e-174 617.1 832 44.4
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 4.8e-174 615.9 724 47.1
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.8e-173 614.0 788 47.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 4.1e-173 612.8 788 47.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.5e-172 610.9 793 45.6
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-170 604.0 647 52.4
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.2e-169 601.3 640 51.9
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.2e-169 601.3 793 45.6
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 1.2e-169 601.3 789 44.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.6e-169 600.9 793 44.9
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.1e-169 600.5 793 44.9
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.3e-168 597.0 741 46.2
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 6.7e-168 595.5 793 45.3
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.6e-167 593.6 797 44.7
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.0e-164 583.9 815 44.2
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.2e-161 574.7 788 43.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 8.8e-160 568.5 791 43.9
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.2e-159 568.2 787 44.5
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 6.3e-158 562.4 627 49.4
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 4.1e-157 559.7 546 54.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 2.2e-155 553.9 554 55.8
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 4.2e-154 549.7 505 57.8
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.3e-150 538.1 569 52.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 3.7e-150 536.6 490 54.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 5.4e-149 532.7 770 44.4
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.8e-147 526.6 745 42.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 8.0e-145 518.8 543 51.9
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.0e-131 473.8 397 61.5
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.0e-124 451.1 433 56.8
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 5.0e-123 446.4 325 69.8
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.8e-121 440.7 707 39.2
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 4.4e-119 433.3 409 57.9
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 9.0e-104 382.5 389 53.0
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.3e-102 378.6 417 51.3
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 9.3e-101 372.5 322 59.0
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.6e-98 362.5 384 50.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 1.6e-97 361.7 373 50.9
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 6.2e-97 359.8 414 50.5
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 6.4e-86 323.2 652 34.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 8.7e-83 312.8 327 51.7
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.5e-82 312.0 703 33.7
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 6.2e-81 306.6 317 54.9
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.1e-80 305.8 628 34.2
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 5.9e-71 273.5 382 44.2
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 4.6e-68 263.8 549 35.2
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.4e-59 235.7 482 34.9
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 6.5e-54 216.9 327 41.3
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.5e-50 205.7 254 42.9
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.7e-46 192.2 212 49.1
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 2.7e-44 184.9 263 40.7
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.2e-39 169.5 244 43.0
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.2e-34 152.9 193 45.6
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.7e-34 150.6 191 46.1
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-34 150.2 253 37.9
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.0e-30 137.5 144 43.8
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.8e-27 129.0 172 44.2
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.5e-26 125.9 183 38.3
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.8e-22 111.3 378 29.1
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.5e-21 108.6 166 38.6
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 1.4e-19 102.8 174 36.2
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 6.4e-17 94.0 117 43.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.6e-15 87.8 68 60.3
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 7.5e-10 70.5 76 42.1
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 3.2e-08 65.1 228 27.2
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.2e-08 65.1 68 47.1
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 4.1e-08 64.7 136 31.6
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 1.2e-07 63.2 295 24.4


User provided reference genes

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