Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20086 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 3.5e-178 628.2 337 100.0
vmacro20085 Vaccinium macrocarpon HOM05D032958 ORTHO05D002720 8.6e-84 314.7 172 89.0
vmacro00186 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 8.2e-26 122.1 63 88.9
Rhsim11G0000900 Rhododendron simsii HOM05D002513 ORTHO05D002720 4.8e-18 96.3 99 53.5
Prupe.5G066400 Prunus persica HOM05D002513 ORTHO05D002720 7.0e-17 92.4 72 62.5
Dinv21651 Davidia involucrata HOM05D002513 ORTHO05D002720 2.7e-16 90.5 63 69.8
CSS0008127 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 5.9e-16 89.4 62 74.2
Gorai.008G233900 Gossypium raimondii HOM05D002513 ORTHO05D002720 1.0e-15 88.6 61 67.2
Atru.chr9.1284 Acer truncatum HOM05D002513 ORTHO05D002720 2.2e-15 87.4 61 68.9
CSS0000182 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 2.2e-15 87.4 63 68.3
Dinv39163 Davidia involucrata HOM05D002513 ORTHO05D002720 2.2e-15 87.4 63 69.8
Duzib205G1336 Durio zibethinus HOM05D002513 ORTHO05D002720 2.9e-15 87.0 61 65.6
Thecc.03G248600 Theobroma cacao HOM05D002513 ORTHO05D002720 2.9e-15 87.0 61 65.6
Actinidia02147 Actinidia chinensis HOM05D002513 ORTHO05D002720 8.5e-15 85.5 60 66.7
Gohir.A12G215700 Gossypium hirsutum HOM05D002513 ORTHO05D002720 8.5e-15 85.5 61 65.6
Gohir.D12G218300 Gossypium hirsutum HOM05D002513 ORTHO05D002720 8.5e-15 85.5 62 64.5
CiPaw.11G081500 Carya illinoinensis HOM05D002513 ORTHO05D002720 1.9e-14 84.3 61 65.6
FAN18G4043 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.9e-14 84.3 71 57.7
MD06G1055600 Malus domestica HOM05D002513 ORTHO05D002720 2.5e-14 84.0 72 56.9
QL12p011564 Quercus lobata HOM05D002513 ORTHO05D002720 2.5e-14 84.0 71 56.3
FvH4_5g19330 Fragaria vesca HOM05D002513 ORTHO05D002720 3.2e-14 83.6 71 56.3
FAN13G1831 Fragaria x ananassa HOM05D002513 ORTHO05D002720 3.2e-14 83.6 71 56.3
RcHm_v2.0_Chr7g0203801 Rosa chinensis HOM05D002513 ORTHO05D002720 3.2e-14 83.6 71 56.3
Gohir.A08G168800 Gossypium hirsutum HOM05D002513 ORTHO05D002720 5.5e-14 82.8 71 54.9
Gohir.D08G187300 Gossypium hirsutum HOM05D002513 ORTHO05D002720 7.2e-14 82.4 71 53.5
Gorai.004G197000 Gossypium raimondii HOM05D002513 ORTHO05D002720 7.2e-14 82.4 71 53.5
Nn1g02339 Nelumbo nucifera HOM05D002513 ORTHO05D002720 1.2e-13 81.6 63 65.1
Actinidia14412 Actinidia chinensis HOM05D002513 ORTHO05D002720 2.7e-13 80.5 56 67.9
Peaxi162Scf01662g00119 Petunia axillaris HOM05D002513 ORTHO05D002720 2.7e-13 80.5 65 60.0
Potri.003G078800 Populus trichocarpa HOM05D002513 ORTHO05D002720 2.7e-13 80.5 60 66.7
Sopen10g032620 Solanum pennellii HOM05D002513 ORTHO05D002720 2.7e-13 80.5 65 60.0
Nn4g26338 Nelumbo nucifera HOM05D002513 ORTHO05D002720 3.6e-13 80.1 68 63.2
TAR629G3140 Trochodendron aralioides HOM05D002513 ORTHO05D002720 4.7e-13 79.7 63 65.1
arahy.Tifrunner.gnm1.ann1.H0C62V Arachis hypogaea HOM05D002513 ORTHO05D002720 6.1e-13 79.3 61 62.3
FAN04G1005 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.0e-12 78.6 71 53.5
MD04G1061900 Malus domestica HOM05D002513 ORTHO05D002720 1.0e-12 78.6 69 56.5
Cpa.g.sc29.189 Carica papaya HOM05D002513 ORTHO05D002720 1.4e-12 78.2 64 56.2
HanXRQChr13g0417821 Helianthus annuus HOM05D002513 ORTHO05D002720 1.8e-12 77.8 60 60.0
arahy.Tifrunner.gnm1.ann1.18SBFH Arachis hypogaea HOM05D002513 ORTHO05D002720 2.3e-12 77.4 61 60.7
arahy.Tifrunner.gnm1.ann1.V507XA Arachis hypogaea HOM05D002513 ORTHO05D002720 2.3e-12 77.4 61 60.7
arahy.Tifrunner.gnm1.ann1.F98T17 Arachis hypogaea HOM05D002513 ORTHO05D002720 3.0e-12 77.0 61 60.7
arahy.Tifrunner.gnm1.ann1.VIP11X Arachis hypogaea HOM05D002513 ORTHO05D002720 3.0e-12 77.0 61 60.7
arahy.Tifrunner.gnm1.ann1.Y2TGKW Arachis hypogaea HOM05D002513 ORTHO05D002720 3.0e-12 77.0 61 60.7
Potri.001G156000 Populus trichocarpa HOM05D002513 ORTHO05D002720 3.0e-12 77.0 70 54.3
arahy.Tifrunner.gnm1.ann1.PD7I3L Arachis hypogaea HOM05D002513 ORTHO05D002720 4.0e-12 76.6 61 60.7
arahy.Tifrunner.gnm1.ann1.2PBN0R Arachis hypogaea HOM05D002513 ORTHO05D002720 5.2e-12 76.3 61 60.7
arahy.Tifrunner.gnm1.ann1.98R2QB Arachis hypogaea HOM05D002513 ORTHO05D002720 5.2e-12 76.3 61 60.7
Cpa.g.sc53.64 Carica papaya HOM05D002513 ORTHO05D002720 5.2e-12 76.3 61 57.4
Lalb_Chr09g0329991 Lupinus albus HOM05D002513 ORTHO05D002720 5.2e-12 76.3 61 60.7
Lalb_Chr16g0386791 Lupinus albus HOM05D002513 ORTHO05D002720 5.2e-12 76.3 61 62.3
arahy.Tifrunner.gnm1.ann1.3AS7PC Arachis hypogaea HOM05D002513 ORTHO05D002720 6.8e-12 75.9 61 57.4
Haze_07948 Corylus avellana HOM05D002513 ORTHO05D002720 6.8e-12 75.9 72 51.4
Lalb_Chr05g0221181 Lupinus albus HOM05D002513 ORTHO05D002720 8.8e-12 75.5 61 60.7
TWI81G0262 Tripterygium wilfordii HOM05D002513 ORTHO05D002720 2.6e-11 73.9 53 66.0
ClCG10G002560 Citrullus lanatus HOM05D002513 ORTHO05D002720 3.4e-11 73.6 58 55.2
PGR042G3434 Punica granatum HOM05D002513 ORTHO05D002720 5.7e-11 72.8 54 59.3
Duzib068G0483 Durio zibethinus HOM05D002513 ORTHO05D002720 7.5e-11 72.4 59 59.3
unitig_8.g3015 Utricularia gibba HOM05D002513 ORTHO05D002720 9.8e-11 72.0 64 54.7
Nitab4.5_0004277g0010 Nicotiana tabacum HOM05D002513 ORTHO05D002720 1.7e-10 71.2 47 59.6
SGA_v2.0_scaffold104G30173 Striga asiatica HOM05D002513 ORTHO05D002720 1.7e-10 71.2 63 57.1
VMungo0251G3547 Vigna mungo HOM05D002513 ORTHO05D002720 2.8e-10 70.5 61 59.0
Ca_21976_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 3.7e-10 70.1 62 54.8
CAN.G841.7 Capsicum annuum HOM05D002513 ORTHO05D002720 6.3e-10 69.3 65 52.3
Medtr4g100750 Medicago truncatula HOM05D002513 ORTHO05D002720 6.3e-10 69.3 61 55.7
Oeu002328.2 Olea europaea HOM05D002513 ORTHO05D002720 6.3e-10 69.3 79 45.6
SGA_v2.0_scaffold199G41180 Striga asiatica HOM05D002513 ORTHO05D002720 6.3e-10 69.3 62 53.2
Oeu022895.1 Olea europaea HOM05D002513 ORTHO05D002720 1.1e-09 68.6 79 50.6
Solyc10g083150.3 Solanum lycopersicum HOM05D002513 ORTHO05D002720 1.1e-09 68.6 58 55.2
Ca_03894_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 1.4e-09 68.2 75 48.0
Manes.01G082800 Manihot esculenta HOM05D002513 ORTHO05D002720 1.4e-09 68.2 49 65.3
Sabra01G0134900 Salix brachista HOM05D002513 ORTHO05D002720 1.8e-09 67.8 84 42.9
ATR0697G259 Amborella trichopoda HOM05D002513 ORTHO05D002720 2.4e-09 67.4 64 56.2
Psat4g074080 Pisum sativum HOM05D002513 ORTHO05D002720 2.4e-09 67.4 59 52.5
Nitab4.5_0006555g0030 Nicotiana tabacum HOM05D002513 ORTHO05D002720 4.1e-09 66.6 48 58.3
Lsat_1_v5_gn_6_92441 Lactuca sativa HOM05D002513 ORTHO05D002720 5.4e-09 66.2 46 60.9
CANSAT21G1233 Cannabis sativa HOM05D002513 ORTHO05D002720 7.0e-09 65.9 73 47.9
Cc08_g12210 Coffea canephora HOM05D002513 ORTHO05D002720 7.0e-09 65.9 59 54.2
Lj4g0017155 Lotus japonicus HOM05D002513 ORTHO05D002720 7.0e-09 65.9 100 38.0
Phvul.003G222100 Phaseolus vulgaris HOM05D002513 ORTHO05D002720 7.0e-09 65.9 61 55.7
TPR.G24353 Trifolium pratense HOM05D002513 ORTHO05D002720 7.0e-09 65.9 63 54.0
Ciclev10018818m.g Citrus clementina HOM05D002513 ORTHO05D002720 1.6e-08 64.7 60 53.3
vmacro14069 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 1.6e-08 64.7 62 53.2
Sed0012573 Sechium edule HOM05D002513 ORTHO05D002720 2.0e-08 64.3 51 52.9
Haze_20631 Corylus avellana HOM05D002513 ORTHO05D002720 2.7e-08 63.9 60 50.0
GSVIVG01006271001 Vitis vinifera HOM05D002513 ORTHO05D002720 2.7e-08 63.9 63 52.4
ECA240G4211 Erigeron canadensis HOM05D002513 ORTHO05D002720 5.9e-08 62.8 60 46.7
Eucgr.E00408 Eucalyptus grandis HOM05D002513 ORTHO05D002720 5.9e-08 62.8 55 54.5
vmacro08621 Vaccinium macrocarpon HOM05D001376 ORTHO05D426905 5.9e-08 62.8 295 27.1
Cfa017519 Carpinus fangiana HOM05D002513 ORTHO05D002720 7.7e-08 62.4 67 44.8
TAR636G3267 Trochodendron aralioides HOM05D002513 ORTHO05D002720 1.3e-07 61.6 62 51.6
MELO3C013928.2 Cucumis melo HOM05D002513 ORTHO05D002720 1.7e-07 61.2 46 58.7
CsaV3_3G002590 Cucumis sativus L. HOM05D002513 ORTHO05D002720 1.7e-07 61.2 46 58.7
vmacro19892 Vaccinium macrocarpon HOM05D032958 ORTHO05D426438 2.2e-07 60.8 68 48.5
Glyma.17G143300 Glycine max HOM05D002513 ORTHO05D002720 5.0e-07 59.7 102 38.2
Sabra03G0048900 Salix brachista HOM05D002513 ORTHO05D002720 5.0e-07 59.7 43 62.8
arahy.Tifrunner.gnm1.ann1.40EGC8 Arachis hypogaea HOM05D002513 ORTHO05D002720 8.5e-07 58.9 47 57.4
Psat5g188640 Pisum sativum HOM05D002513 ORTHO05D002720 8.5e-07 58.9 73 43.8
HanXRQChr03g0088821 Helianthus annuus HOM05D002513 ORTHO05D002720 1.9e-06 57.8 46 50.0
PSO210G4067 Papaver somniferum HOM05D002513 ORTHO05D002720 1.9e-06 57.8 63 54.0
PSO832G0398 Papaver somniferum HOM05D002513 ORTHO05D002720 1.9e-06 57.8 63 54.0
Medtr5g098230 Medicago truncatula HOM05D002513 ORTHO05D002720 2.5e-06 57.4 53 49.1
Medtr5g081800 Medicago truncatula HOM05D002513 ORTHO05D002720 3.2e-06 57.0 60 45.0
arahy.Tifrunner.gnm1.ann1.AB5AZK Arachis hypogaea HOM05D002513 ORTHO05D002720 5.5e-06 56.2 47 55.3


User provided reference genes

Program Settings