Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 2.8e-236 821.6 428 100.0
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 4.4e-157 558.5 413 75.8
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.5e-149 533.5 439 71.3
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.8e-139 500.0 436 66.5
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 5.2e-134 481.9 380 71.8
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 4.4e-133 478.8 425 66.4
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.1e-131 472.6 422 63.7
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.0e-129 467.6 425 64.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 2.9e-129 466.1 431 64.0
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 7.3e-128 461.5 425 63.5
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.5e-125 453.8 428 63.3
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.2e-124 449.9 414 65.5
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.9e-124 449.5 379 68.1
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 3.7e-124 449.1 425 64.9
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.7e-124 449.1 425 64.9
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 4.9e-124 448.7 411 62.5
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 2.4e-123 446.4 409 63.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.4e-123 445.3 425 64.2
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-122 443.7 425 64.5
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 4.6e-122 442.2 435 59.8
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 6.0e-122 441.8 429 62.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 7.8e-122 441.4 397 63.7
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 7.8e-122 441.4 369 66.9
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.3e-121 440.7 426 62.4
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 5.0e-121 438.7 445 59.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 8.6e-121 438.0 369 65.6
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 5.6e-120 435.3 374 65.8
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 9.5e-120 434.5 399 63.9
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.2e-119 434.1 373 65.7
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.6e-119 433.7 408 62.7
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.6e-119 433.7 399 63.4
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.1e-118 431.0 399 63.2
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 2.3e-118 429.9 370 64.3
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.2e-117 427.6 394 62.7
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 7.5e-117 424.9 421 59.9
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.3e-116 424.1 421 59.1
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.7e-116 423.7 395 61.0
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.2e-116 423.3 386 64.0
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 3.7e-116 422.5 339 69.6
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 3.7e-116 422.5 416 59.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 4.9e-116 422.2 416 59.1
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.4e-115 420.6 366 63.9
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 2.4e-115 419.9 368 63.6
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 2.4e-115 419.9 419 59.9
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 3.2e-115 419.5 416 58.9
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.4e-115 418.7 426 61.3
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 7.0e-115 418.3 369 63.4
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 9.2e-115 417.9 372 63.7
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-114 417.2 369 63.4
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.6e-114 417.2 425 57.9
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 4.6e-114 415.6 375 62.7
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 4.6e-114 415.6 396 61.9
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 7.8e-114 414.8 303 73.6
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-113 414.5 369 63.4
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.0e-113 414.5 369 63.4
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 3.9e-113 412.5 365 64.1
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 6.6e-113 411.8 370 63.0
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.5e-112 410.6 370 63.0
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.9e-112 410.2 370 62.7
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 3.3e-112 409.5 403 60.3
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.6e-112 408.7 367 63.2
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 7.3e-112 408.3 372 62.6
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.2e-111 407.5 354 65.3
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.2e-111 407.5 420 58.3
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.6e-111 407.1 412 59.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.1e-111 406.8 373 61.9
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.8e-111 406.4 423 58.4
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.6e-111 406.0 343 67.9
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 3.6e-111 406.0 421 57.5
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 4.7e-111 405.6 425 57.9
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 8.1e-111 404.8 367 63.5
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.3e-110 403.3 373 62.5
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 4.0e-110 402.5 332 67.5
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.2e-109 401.0 421 57.2
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 9.9e-109 397.9 427 57.4
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.7e-108 397.1 420 57.1
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.1e-107 394.4 424 56.4
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 9.2e-107 391.3 333 65.8
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.2e-106 391.0 427 58.3
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.7e-106 389.8 333 65.5
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 3.0e-105 386.3 423 55.8
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.6e-103 380.6 290 71.4
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 2.1e-103 380.2 367 60.8
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 3.6e-103 379.4 245 82.0
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 4.0e-102 375.9 344 64.0
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.9e-100 369.8 469 52.9
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 8.4e-100 368.2 361 58.4
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.9e-99 367.1 385 56.1
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 2.1e-98 363.6 362 58.6
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 6.6e-97 358.6 356 59.0
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 6.2e-95 352.1 455 49.0
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 8.1e-95 351.7 346 60.4
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 3.1e-94 349.7 408 54.9
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.0e-94 349.4 460 48.0
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 4.4e-93 345.9 358 55.6
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.9e-91 340.5 390 54.4
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 3.2e-91 339.7 320 59.7
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 5.1e-89 332.4 309 63.1
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 1.5e-88 330.9 369 55.8
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.3e-87 327.8 359 57.4
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.6e-87 327.4 309 59.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 2.0e-85 320.5 327 54.7
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 2.6e-85 320.1 329 59.6
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.7e-84 317.4 252 69.8
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 4.9e-84 315.8 429 49.4
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 9.0e-78 295.0 334 56.0
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.8e-71 273.5 431 45.0
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 6.9e-70 268.9 313 49.2
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 9.0e-70 268.5 221 68.8
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 7.6e-69 265.4 307 49.5
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 3.5e-66 256.5 250 61.6
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 2.8e-63 246.9 229 59.4
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 3.1e-62 243.4 172 74.4
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.1e-62 243.0 298 48.3
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 4.5e-61 239.6 249 54.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.3e-60 238.0 231 58.9
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.7e-56 222.6 147 78.9
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.3e-54 216.1 306 43.1
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 2.0e-53 214.2 130 84.6
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.7e-48 196.1 239 50.6
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-44 185.3 150 70.0
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.4e-40 169.9 123 70.7
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-32 145.2 245 33.9
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 7.5e-32 142.5 157 58.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.2e-24 118.6 82 80.5
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 4.4e-24 116.7 90 68.9
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-23 114.8 193 37.8
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.7e-21 107.5 223 34.5
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 5.0e-12 76.6 41 95.1
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 2.8e-10 70.9 119 47.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 2.0e-08 64.7 36 86.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.6e-08 64.3 243 24.7


User provided reference genes

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