Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19462 Vaccinium macrocarpon HOM05D004674 ORTHO05D007261 1.0e-70 270.0 139 100.0
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 2.6e-66 255.4 137 94.2
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 4.4e-66 254.6 139 93.5
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 4.5e-63 244.6 139 89.2
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 2.9e-62 241.9 139 89.2
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 3.8e-62 241.5 139 88.5
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 4.2e-61 238.0 139 87.1
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 7.2e-61 237.3 140 87.1
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 9.4e-61 236.9 140 87.1
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 9.4e-61 236.9 140 87.1
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 9.4e-61 236.9 139 86.3
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 2.1e-60 235.7 140 86.4
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 2.1e-60 235.7 140 86.4
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.1e-60 235.7 139 86.3
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.7e-60 235.3 140 85.7
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 2.7e-60 235.3 139 84.9
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 4.7e-60 234.6 140 86.4
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 4.7e-60 234.6 139 86.3
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 6.1e-60 234.2 140 86.4
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 6.1e-60 234.2 137 86.1
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 6.1e-60 234.2 139 86.3
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 6.1e-60 234.2 139 84.9
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.0e-59 233.4 139 85.6
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.4e-59 233.0 139 84.9
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.4e-59 233.0 139 83.5
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 1.8e-59 232.6 140 85.7
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 2.3e-59 232.3 137 84.7
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 3.0e-59 231.9 139 84.9
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 3.0e-59 231.9 137 84.7
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 4.0e-59 231.5 139 85.6
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 4.0e-59 231.5 137 85.4
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 5.2e-59 231.1 139 83.5
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 5.2e-59 231.1 140 84.3
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 5.2e-59 231.1 139 83.5
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 6.8e-59 230.7 139 83.5
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 6.8e-59 230.7 137 82.5
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 6.8e-59 230.7 139 84.2
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 6.8e-59 230.7 139 84.2
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 8.8e-59 230.3 138 84.1
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.2e-58 229.9 137 83.2
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 1.2e-58 229.9 139 83.5
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 1.5e-58 229.6 140 84.3
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 1.5e-58 229.6 140 84.3
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 1.5e-58 229.6 139 84.2
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 1.5e-58 229.6 139 83.5
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 2.0e-58 229.2 139 82.0
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 2.0e-58 229.2 136 85.3
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 2.0e-58 229.2 139 83.5
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 2.6e-58 228.8 140 83.6
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 2.6e-58 228.8 139 83.5
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 3.4e-58 228.4 137 83.9
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 3.4e-58 228.4 135 85.2
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 4.4e-58 228.0 137 83.9
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 5.7e-58 227.6 137 83.2
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 5.7e-58 227.6 137 83.9
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 7.5e-58 227.3 136 85.3
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 7.5e-58 227.3 136 85.3
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 7.5e-58 227.3 138 83.3
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 9.8e-58 226.9 139 82.0
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 9.8e-58 226.9 139 84.2
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 9.8e-58 226.9 139 82.7
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 1.7e-57 226.1 137 81.8
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.2e-57 225.7 136 84.6
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 2.2e-57 225.7 136 84.6
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 2.8e-57 225.3 139 83.5
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 2.8e-57 225.3 137 83.2
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 3.7e-57 224.9 139 82.7
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 3.7e-57 224.9 137 82.5
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 3.7e-57 224.9 139 82.7
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 4.9e-57 224.6 136 84.6
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 4.9e-57 224.6 137 83.2
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 4.9e-57 224.6 139 80.6
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 4.9e-57 224.6 139 81.3
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 4.9e-57 224.6 139 81.3
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.9e-57 224.6 139 80.6
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 1.1e-56 223.4 137 81.0
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 2.4e-56 222.2 137 83.9
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 3.1e-56 221.9 137 81.0
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 4.1e-56 221.5 135 81.5
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 5.4e-56 221.1 137 79.6
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 9.1e-56 220.3 132 85.6
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 1.2e-55 219.9 139 81.3
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 5.9e-55 217.6 139 79.9
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 7.7e-55 217.2 137 78.8
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 7.7e-55 217.2 139 77.7
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 1.0e-54 216.9 139 78.4
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 1.0e-54 216.9 125 88.0
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.0e-54 216.9 139 78.4
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 1.0e-54 216.9 137 79.6
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.1e-53 213.4 139 76.3
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 4.3e-53 211.5 168 67.9
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 7.2e-53 210.7 138 74.6
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 7.2e-53 210.7 139 75.5
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 2.1e-52 209.1 137 76.6
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 6.1e-52 207.6 160 69.4
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 8.0e-52 207.2 129 80.6
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 1.0e-51 206.8 137 73.0
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.3e-49 199.9 135 72.6
TAR376G0549 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.7e-49 199.5 131 77.1
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 9.2e-48 193.7 139 70.5
Zm00001eb098830 Zea mays HOM05D004674 ORTHO05D007261 6.6e-46 187.6 130 70.8
Psat4g095680 Pisum sativum HOM05D004674 ORTHO05D007261 1.4e-43 179.9 105 85.7
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 1.2e-31 140.2 95 80.0
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.0e-30 137.1 89 76.4
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 8.6e-30 134.0 81 86.4
Zm00001eb124970 Zea mays HOM05D004674 ORTHO05D007261 1.1e-21 107.1 75 73.3
Zm00001eb334700 Zea mays HOM05D004674 ORTHO05D007261 4.0e-19 98.6 71 69.0
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 3.8e-17 92.0 56 80.4
Atru.chr3.653 Acer truncatum HOM05D004674 ORTHO05D007261 9.3e-08 60.8 30 90.0


User provided reference genes

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