Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.3e-134 483.0 239 100.0
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.8e-91 339.7 173 95.4
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.8e-83 313.2 173 86.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 4.9e-81 305.1 173 83.2
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.8e-80 303.1 173 82.1
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.1e-80 302.4 173 82.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 2.9e-78 295.8 173 79.8
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 8.6e-78 294.3 173 80.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 3.3e-77 292.4 173 78.6
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.3e-77 292.4 173 79.2
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 3.3e-77 292.4 173 77.5
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.3e-77 292.0 172 79.7
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 4.3e-77 292.0 173 81.5
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 4.3e-77 292.0 173 78.0
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 7.3e-77 291.2 173 79.8
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 7.3e-77 291.2 172 79.7
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.3e-77 291.2 172 79.7
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 9.5e-77 290.8 176 78.4
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 9.5e-77 290.8 173 77.5
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.6e-76 290.0 173 78.0
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.6e-76 290.0 172 79.1
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.6e-76 290.0 173 77.5
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 2.8e-76 289.3 173 78.0
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.8e-76 289.3 173 76.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.8e-76 289.3 173 76.9
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 3.6e-76 288.9 173 79.2
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 3.6e-76 288.9 172 78.5
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.0e-75 287.3 173 76.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.8e-75 286.6 172 77.9
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.8e-75 286.6 173 78.6
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.2e-75 285.0 173 78.0
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 5.2e-75 285.0 173 78.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 6.8e-75 284.6 173 78.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.9e-75 284.3 173 77.5
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.2e-74 283.9 173 77.5
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.6e-74 282.7 173 78.6
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.4e-74 282.0 173 76.9
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 4.4e-74 282.0 172 77.3
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.8e-74 281.6 173 76.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.8e-74 281.6 173 75.7
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.8e-74 281.6 173 78.0
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 7.5e-74 281.2 173 75.1
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 7.5e-74 281.2 173 75.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 7.5e-74 281.2 173 75.1
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 9.8e-74 280.8 173 76.3
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.3e-73 280.4 173 76.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-73 280.4 173 78.0
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.7e-73 280.0 173 76.3
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.7e-73 280.0 173 76.3
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-73 280.0 173 77.5
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-73 280.0 173 77.5
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 2.9e-73 279.3 173 77.5
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 4.9e-73 278.5 173 74.6
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 6.4e-73 278.1 173 76.3
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-72 276.9 173 76.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-72 276.9 173 76.9
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.4e-72 276.9 173 76.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.4e-72 276.2 173 77.5
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 4.1e-72 275.4 173 74.6
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.1e-72 275.4 173 74.6
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 5.4e-72 275.0 173 74.0
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.4e-72 275.0 173 76.3
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 7.0e-72 274.6 173 75.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 9.2e-72 274.2 173 74.6
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.6e-71 273.5 173 73.4
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 2.0e-71 273.1 173 75.1
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.5e-71 272.3 173 75.1
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 6.0e-71 271.6 173 74.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.0e-70 270.8 173 75.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.3e-70 270.4 172 72.7
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.3e-70 269.6 173 74.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 5.0e-70 268.5 174 74.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.5e-69 266.9 173 71.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.1e-68 263.1 173 72.8
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 8.0e-68 261.2 173 71.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 8.0e-68 261.2 173 69.9
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 5.2e-67 258.5 173 70.5
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 6.8e-67 258.1 173 69.9
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 6.8e-67 258.1 173 72.3
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 8.9e-67 257.7 173 68.8
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.2e-66 257.3 173 70.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.2e-66 257.3 173 71.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.5e-66 256.9 173 69.9
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.5e-66 256.9 173 69.9
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.0e-66 256.5 172 71.5
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 7.5e-66 254.6 173 69.4
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 9.8e-66 254.2 173 68.8
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.2e-65 253.1 173 68.2
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.9e-65 252.7 173 68.8
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 3.7e-65 252.3 173 69.4
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 4.9e-65 251.9 173 67.6
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.1e-64 250.8 173 67.6
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.4e-64 250.4 173 69.4
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.4e-64 250.4 173 69.4
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.4e-64 250.4 173 69.4
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 9.2e-64 247.7 175 70.9
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 2.0e-63 246.5 175 69.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.7e-63 246.1 174 68.4
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.5e-63 245.7 175 68.6
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.7e-62 243.4 172 66.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 6.6e-62 241.5 173 65.3
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.1e-61 240.7 176 66.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 4.3e-61 238.8 161 68.3
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.3e-61 238.8 161 69.6
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.1e-60 236.5 184 64.1
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.0e-58 229.9 176 64.8
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.7e-57 226.9 172 64.0
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.6e-52 210.3 130 74.6
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 3.4e-50 202.6 178 55.1
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 7.6e-50 201.4 173 57.8
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.9e-49 199.5 175 56.0
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 6.4e-49 198.4 173 54.9
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.5e-45 186.4 131 70.2
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.1e-36 156.8 203 44.3
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 3.1e-35 152.9 87 78.2
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.9e-29 133.7 126 54.8
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 7.4e-29 131.7 190 41.1
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 2.4e-27 126.7 121 58.7
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.0e-17 94.7 67 58.2
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.0e-14 84.7 90 44.4
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.3e-14 83.6 221 29.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.6e-10 70.1 50 70.0
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.7e-09 67.4 49 63.3
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 6.5e-09 65.5 196 30.1
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.9e-08 63.9 50 66.0


User provided reference genes

Program Settings