Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 8.7e-196 686.8 351 100.0
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 3.9e-172 608.2 349 85.4
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 1.4e-166 589.7 349 88.0
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 3.2e-166 588.6 351 82.9
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 1.2e-165 586.6 353 86.4
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 3.7e-162 575.1 322 84.8
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 4.8e-162 574.7 325 82.5
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 1.1e-161 573.5 326 83.7
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 2.4e-161 572.4 329 84.8
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.2e-160 570.1 324 84.6
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 2.0e-160 569.3 322 83.5
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 4.5e-160 568.2 322 83.9
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 6.5e-159 564.3 350 80.3
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 8.5e-159 563.9 326 81.9
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.1e-158 563.5 326 83.1
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 1.9e-158 562.8 325 82.2
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 2.5e-158 562.4 348 78.4
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 4.2e-158 561.6 320 84.7
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 1.2e-157 560.1 325 82.5
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 1.6e-157 559.7 321 83.2
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 1.6e-157 559.7 323 82.7
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 3.6e-157 558.5 323 82.7
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 6.1e-157 557.8 325 81.5
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 1.4e-156 556.6 328 81.7
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 3.0e-156 555.4 323 81.1
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 3.0e-156 555.4 326 80.4
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 5.2e-156 554.7 326 81.0
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 6.7e-156 554.3 323 81.1
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 1.2e-155 553.5 321 82.9
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 2.6e-155 552.4 326 80.4
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 3.3e-155 552.0 347 77.8
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 4.4e-155 551.6 331 81.0
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 4.4e-155 551.6 331 81.0
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 4.4e-155 551.6 330 81.8
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 7.5e-155 550.8 325 79.4
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 9.7e-155 550.4 331 80.7
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 1.3e-154 550.1 327 80.1
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 1.7e-154 549.7 326 79.8
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.7e-154 549.7 327 80.1
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 2.2e-154 549.3 322 80.4
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 2.2e-154 549.3 321 81.3
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 2.2e-154 549.3 331 81.0
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 2.8e-154 548.9 327 79.8
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 3.7e-154 548.5 330 80.6
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 4.8e-154 548.1 321 81.6
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 6.3e-154 547.7 325 80.3
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 6.3e-154 547.7 347 76.1
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 1.4e-153 546.6 350 75.1
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 1.4e-153 546.6 320 81.9
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.8e-153 546.2 321 82.6
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.8e-153 546.2 349 75.9
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 2.4e-153 545.8 326 79.1
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 2.4e-153 545.8 318 81.8
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 3.1e-153 545.4 331 80.4
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 3.1e-153 545.4 348 76.4
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 5.3e-153 544.7 318 81.8
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 7.0e-153 544.3 318 81.4
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 7.0e-153 544.3 318 80.8
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 7.0e-153 544.3 321 80.7
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 1.2e-152 543.5 318 81.1
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 1.2e-152 543.5 321 81.0
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 2.7e-152 542.3 322 81.1
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 3.5e-152 542.0 323 79.6
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 3.5e-152 542.0 323 79.6
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 4.5e-152 541.6 319 81.8
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.0e-151 540.4 350 74.0
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 1.3e-151 540.0 328 79.6
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 2.2e-151 539.3 347 76.4
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 2.2e-151 539.3 326 78.8
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 3.8e-151 538.5 322 79.5
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 1.9e-150 536.2 321 81.0
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 2.5e-150 535.8 328 78.0
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 3.2e-150 535.4 328 78.7
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 1.2e-149 533.5 329 77.5
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 1.6e-149 533.1 323 80.2
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 2.1e-149 532.7 326 75.8
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 2.1e-149 532.7 328 79.0
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 1.0e-148 530.4 329 78.4
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 2.3e-148 529.3 326 77.3
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 5.2e-148 528.1 329 78.1
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.2e-147 526.9 329 77.8
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 1.7e-146 523.1 321 76.0
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 2.2e-146 522.7 329 77.5
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 2.2e-146 522.7 328 77.7
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 4.8e-146 521.5 325 78.2
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 8.3e-146 520.8 325 78.2
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 1.8e-145 519.6 325 77.8
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 4.1e-145 518.5 324 76.2
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.9e-142 509.6 289 85.5
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 3.3e-142 508.8 289 85.1
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 2.8e-141 505.8 332 72.9
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.4e-140 503.4 323 73.7
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 2.0e-139 499.6 355 69.9
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 2.6e-139 499.2 327 72.8
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 7.5e-139 497.7 300 79.3
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 2.9e-135 485.7 288 79.5
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 6.1e-133 478.0 290 80.0
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 5.2e-132 474.9 290 77.9
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 8.3e-130 467.6 358 68.4
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 1.4e-129 466.8 320 74.4
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 9.2e-129 464.2 254 87.0
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.5e-126 456.8 258 82.2
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 1.5e-126 456.8 366 67.8
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 7.3e-126 454.5 258 81.8
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 7.5e-123 444.5 259 80.7
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 4.9e-122 441.8 294 77.6
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 6.2e-117 424.9 258 77.9
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 7.3e-110 401.4 227 84.1
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 3.6e-109 399.1 326 61.3
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 2.6e-107 392.9 227 85.0
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 1.7e-106 390.2 325 59.7
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 4.3e-102 375.6 324 58.6
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 3.9e-87 325.9 302 55.6
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 2.5e-81 306.6 167 87.4
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 1.2e-80 304.3 276 60.5
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 6.7e-79 298.5 211 65.9
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 6.5e-74 282.0 174 77.6
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 7.2e-65 251.9 212 59.4
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 6.1e-64 248.8 144 81.9
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 1.5e-59 234.2 206 60.2
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 3.0e-55 219.9 326 39.0
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 3.5e-51 206.5 195 57.9
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 5.0e-50 202.6 316 44.3
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 9.4e-49 198.4 241 46.1
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 5.9e-43 179.1 357 33.3
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 7.2e-41 172.2 106 74.5
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 1.6e-40 171.0 114 72.8
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 6.3e-37 159.1 233 46.8
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 1.4e-36 157.9 321 35.5
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 2.3e-23 114.0 57 94.7
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 6.6e-18 95.9 249 31.7
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 1.2e-16 91.7 98 52.0
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 2.1e-16 90.9 45 93.3
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 8.0e-16 89.0 55 81.8
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 7.5e-14 82.4 78 56.4
Solyc12g027700.1 Solanum lycopersicum HOM05D002908 ORTHO05D050692 1.1e-07 62.0 30 83.3
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 3.1e-07 60.5 41 75.6


User provided reference genes

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