Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18603 Vaccinium macrocarpon HOM05D005837 ORTHO05D007594 5.4e-72 274.2 141 100.0
Dinv21909 Davidia involucrata HOM05D005837 ORTHO05D007594 1.0e-62 243.4 141 86.5
Atru.chr4.64 Acer truncatum HOM05D005837 ORTHO05D007594 1.5e-61 239.6 139 85.6
Rhsim08G0010400 Rhododendron simsii HOM05D005837 ORTHO05D007594 1.9e-61 239.2 139 84.9
Actinidia28231 Actinidia chinensis HOM05D005837 ORTHO05D007594 4.3e-61 238.0 139 84.2
Manes.12G134900 Manihot esculenta HOM05D005837 ORTHO05D007594 4.3e-61 238.0 139 84.2
GSVIVG01002467001 Vitis vinifera HOM05D005837 ORTHO05D007594 4.3e-61 238.0 139 83.5
Sabra05G0062100 Salix brachista HOM05D005837 ORTHO05D007594 7.3e-61 237.3 139 84.9
CSS0022010 Camellia sinensis var. sinensis HOM05D005837 ORTHO05D007594 9.6e-61 236.9 139 83.5
Duzib147G0987 Durio zibethinus HOM05D005837 ORTHO05D007594 9.6e-61 236.9 139 84.2
Actinidia28865 Actinidia chinensis HOM05D005837 ORTHO05D007594 2.1e-60 235.7 139 84.2
CSS0040315 Camellia sinensis var. sinensis HOM05D005837 ORTHO05D007594 2.1e-60 235.7 139 82.7
Thecc.01G101500 Theobroma cacao HOM05D005837 ORTHO05D007594 2.1e-60 235.7 139 84.2
Dinv13188 Davidia involucrata HOM05D005837 ORTHO05D007594 2.8e-60 235.3 136 86.0
Potri.005G075600 Populus trichocarpa HOM05D005837 ORTHO05D007594 1.8e-59 232.6 139 82.0
Solyc05g051590.3 Solanum lycopersicum HOM05D005837 ORTHO05D007594 4.0e-59 231.5 139 82.0
Sopen05g030040 Solanum pennellii HOM05D005837 ORTHO05D007594 4.0e-59 231.5 139 82.0
TAR376G0564 Trochodendron aralioides HOM05D005837 ORTHO05D007594 4.0e-59 231.5 139 80.6
Potri.007G092800 Populus trichocarpa HOM05D005837 ORTHO05D007594 5.3e-59 231.1 137 83.2
PGSC0003DMG400007222 Solanum tuberosum HOM05D005837 ORTHO05D007594 6.9e-59 230.7 139 81.3
VMungo0251G2060 Vigna mungo HOM05D005837 ORTHO05D007594 6.9e-59 230.7 139 78.4
Duzib264G0353 Durio zibethinus HOM05D005837 ORTHO05D007594 9.0e-59 230.3 139 81.3
Eucgr.H04785 Eucalyptus grandis HOM05D005837 ORTHO05D007594 1.2e-58 229.9 139 79.1
Nn5g30122 Nelumbo nucifera HOM05D005837 ORTHO05D007594 1.2e-58 229.9 139 80.6
TWI53G1711 Tripterygium wilfordii HOM05D005837 ORTHO05D007594 1.2e-58 229.9 139 80.6
Lj4A891G48 Lonicera japonica HOM05D005837 ORTHO05D007594 2.0e-58 229.2 139 79.9
TWI77G0214 Tripterygium wilfordii HOM05D005837 ORTHO05D007594 2.0e-58 229.2 139 80.6
Glyma.08G135800 Glycine max HOM05D005837 ORTHO05D007594 2.6e-58 228.8 139 78.4
Hma1.2p1_0047F.1_g027810 Hydrangea macrophylla HOM05D005837 ORTHO05D007594 2.6e-58 228.8 139 82.7
Phvul.002G256000 Phaseolus vulgaris HOM05D005837 ORTHO05D007594 2.6e-58 228.8 139 78.4
THA.LOC104798971 Tarenaya hassleriana HOM05D005837 ORTHO05D007594 2.6e-58 228.8 139 79.9
Gohir.D11G055600 Gossypium hirsutum HOM05D005837 ORTHO05D007594 3.4e-58 228.4 139 80.6
Cc07_g15220 Coffea canephora HOM05D005837 ORTHO05D007594 4.5e-58 228.0 139 79.9
MBI05_g19355_MAGBIO Magnolia biondii HOM05D005837 ORTHO05D007594 4.5e-58 228.0 139 77.0
ATR0118G022 Amborella trichopoda HOM05D005837 ORTHO05D007594 5.8e-58 227.6 139 79.1
TPR.G6228 Trifolium pratense HOM05D005837 ORTHO05D007594 5.8e-58 227.6 139 77.7
Gorai.007G060800 Gossypium raimondii HOM05D005837 ORTHO05D007594 7.6e-58 227.3 139 79.9
CANSAT01G1018 Cannabis sativa HOM05D005837 ORTHO05D007594 9.9e-58 226.9 139 79.1
Lj4g0008298 Lotus japonicus HOM05D005837 ORTHO05D007594 9.9e-58 226.9 139 79.9
Lalb_Chr07g0185181 Lupinus albus HOM05D005837 ORTHO05D007594 9.9e-58 226.9 139 79.9
Medtr8g090230 Medicago truncatula HOM05D005837 ORTHO05D007594 9.9e-58 226.9 139 76.3
Ca_17737_v3 Cicer arietinum L. HOM05D005837 ORTHO05D007594 1.3e-57 226.5 139 78.4
Migut.L00122 Erythranthe guttata HOM05D005837 ORTHO05D007594 1.7e-57 226.1 139 82.0
Gohir.D11G221614 Gossypium hirsutum HOM05D005837 ORTHO05D007594 2.9e-57 225.3 139 79.1
Gorai.007G238700 Gossypium raimondii HOM05D005837 ORTHO05D007594 2.9e-57 225.3 139 79.1
arahy.Tifrunner.gnm1.ann1.UTAL3L Arachis hypogaea HOM05D005837 ORTHO05D007594 3.8e-57 224.9 139 79.1
Carub.0008s2584 Capsella rubella HOM05D005837 ORTHO05D007594 3.8e-57 224.9 139 78.4
PGR102G0026 Punica granatum HOM05D005837 ORTHO05D007594 4.9e-57 224.6 139 77.7
Cfa002663 Carpinus fangiana HOM05D005837 ORTHO05D007594 6.4e-57 224.2 139 79.9
Gohir.A11G201400 Gossypium hirsutum HOM05D005837 ORTHO05D007594 8.4e-57 223.8 139 78.4
SGA_v2.0_scaffold34G13592 Striga asiatica HOM05D005837 ORTHO05D007594 8.4e-57 223.8 139 79.1
MSTRG.15711 Avicennia marina HOM05D005837 ORTHO05D007594 1.4e-56 223.0 139 79.9
COL.COLO4_09964 Corchorus olitorius HOM05D005837 ORTHO05D007594 1.4e-56 223.0 139 78.4
Sp2g28080 Schrenkiella parvula HOM05D005837 ORTHO05D007594 1.4e-56 223.0 139 77.7
QL06p049517 Quercus lobata HOM05D005837 ORTHO05D007594 1.9e-56 222.6 139 77.0
Ciclev10025805m.g Citrus clementina HOM05D005837 ORTHO05D007594 2.4e-56 222.2 139 78.4
BraA09t36542Z Brassica rapa HOM05D005837 ORTHO05D007594 3.2e-56 221.9 140 77.9
ECA232G4987 Erigeron canadensis HOM05D005837 ORTHO05D007594 5.4e-56 221.1 139 79.1
HanXRQChr10g0305351 Helianthus annuus HOM05D005837 ORTHO05D007594 5.4e-56 221.1 139 78.4
A06p31820 Brassica napus HOM05D005837 ORTHO05D007594 7.1e-56 220.7 140 77.9
BraA06t26113Z Brassica rapa HOM05D005837 ORTHO05D007594 7.1e-56 220.7 140 77.9
ClCG01G018760 Citrullus lanatus HOM05D005837 ORTHO05D007594 7.1e-56 220.7 139 78.4
SalBow5G3973 Salvia bowleyana HOM05D005837 ORTHO05D007594 7.1e-56 220.7 139 79.1
SalBow5G4805 Salvia bowleyana HOM05D005837 ORTHO05D007594 7.1e-56 220.7 139 79.1
BolC9t53935H Brassica oleracea HOM05D005837 ORTHO05D007594 9.3e-56 220.3 140 77.1
MELO3C007756.2 Cucumis melo HOM05D005837 ORTHO05D007594 9.3e-56 220.3 139 78.4
CsaV3_6G045430 Cucumis sativus L. HOM05D005837 ORTHO05D007594 9.3e-56 220.3 139 78.4
HanXRQChr09g0260241 Helianthus annuus HOM05D005837 ORTHO05D007594 9.3e-56 220.3 139 77.0
Sc16g0005040 Simmondsia chinensis HOM05D005837 ORTHO05D007594 9.3e-56 220.3 139 78.4
BcaB02g09852 Brassica carinata HOM05D005837 ORTHO05D007594 1.2e-55 219.9 139 77.0
BcaB02g09853 Brassica carinata HOM05D005837 ORTHO05D007594 1.2e-55 219.9 139 77.0
BcaB04g20002 Brassica carinata HOM05D005837 ORTHO05D007594 1.2e-55 219.9 139 76.3
CARHR293770 Cardamine hirsuta HOM05D005837 ORTHO05D007594 1.2e-55 219.9 139 77.0
DCAR_014225 Daucus carota HOM05D005837 ORTHO05D007594 1.2e-55 219.9 139 79.9
BcaC01g02731 Brassica carinata HOM05D005837 ORTHO05D007594 1.6e-55 219.5 140 77.1
C03p61190 Brassica napus HOM05D005837 ORTHO05D007594 1.6e-55 219.5 140 77.1
BolC3t18379H Brassica oleracea HOM05D005837 ORTHO05D007594 1.6e-55 219.5 140 77.1
Prupe.6G187000 Prunus persica HOM05D005837 ORTHO05D007594 1.6e-55 219.5 139 77.0
A09p08910 Brassica napus HOM05D005837 ORTHO05D007594 2.1e-55 219.2 140 76.4
CiPaw.04G099500 Carya illinoinensis HOM05D005837 ORTHO05D007594 2.1e-55 219.2 139 77.7
Thhalv10004589m.g Eutrema salsugineum HOM05D005837 ORTHO05D007594 2.7e-55 218.8 139 75.5
Psat7g054880 Pisum sativum HOM05D005837 ORTHO05D007594 2.7e-55 218.8 137 76.6
Ah.03g143560 Amaranthus hybridus HOM05D005837 ORTHO05D007594 6.0e-55 217.6 139 74.8
Lsat_1_v5_gn_4_141261 Lactuca sativa HOM05D005837 ORTHO05D007594 6.0e-55 217.6 139 77.7
Sed0019406 Sechium edule HOM05D005837 ORTHO05D007594 6.0e-55 217.6 139 78.4
Haze_24932 Corylus avellana HOM05D005837 ORTHO05D007594 7.9e-55 217.2 133 80.5
Aa31LG1G16930 Aethionema arabicum HOM05D005837 ORTHO05D007594 1.0e-54 216.9 140 77.1
SHI29446 Sapria himalayana HOM05D005837 ORTHO05D007594 1.0e-54 216.9 139 76.3
AL8G42500 Arabidopsis lyrata HOM05D005837 ORTHO05D007594 1.3e-54 216.5 139 77.0
BcaC04g23271 Brassica carinata HOM05D005837 ORTHO05D007594 1.8e-54 216.1 140 75.0
C09p10350 Brassica napus HOM05D005837 ORTHO05D007594 1.8e-54 216.1 140 75.0
MD01G1029800 Malus domestica HOM05D005837 ORTHO05D007594 3.0e-54 215.3 139 77.0
EL10Ac6g15104 Beta vulgaris HOM05D005837 ORTHO05D007594 5.1e-54 214.5 139 74.8
RcHm_v2.0_Chr2g0113501 Rosa chinensis HOM05D005837 ORTHO05D007594 5.1e-54 214.5 139 74.8
AUR62003793 Chenopodium quinoa HOM05D005837 ORTHO05D007594 6.7e-54 214.2 137 75.9
AUR62002009 Chenopodium quinoa HOM05D005837 ORTHO05D007594 8.7e-54 213.8 139 75.5
FAN23G0829 Fragaria x ananassa HOM05D005837 ORTHO05D007594 1.1e-53 213.4 139 74.8
FAN26G1738 Fragaria x ananassa HOM05D005837 ORTHO05D007594 1.1e-53 213.4 139 74.8
MD15G1324100 Malus domestica HOM05D005837 ORTHO05D007594 1.1e-53 213.4 139 74.8
PSO447G0182 Papaver somniferum HOM05D005837 ORTHO05D007594 1.1e-53 213.4 139 75.5
AT5G65000 Arabidopsis thaliana HOM05D005837 ORTHO05D007594 1.5e-53 213.0 139 75.5
FAN28G0473 Fragaria x ananassa HOM05D005837 ORTHO05D007594 1.9e-53 212.6 139 74.8
FvH4_1g20890 Fragaria vesca HOM05D005837 ORTHO05D007594 5.6e-53 211.1 139 74.1
FAN19G3104 Fragaria x ananassa HOM05D005837 ORTHO05D007594 5.6e-53 211.1 139 74.1
Aqoxy5G01893 Aquilegia oxysepala HOM05D005837 ORTHO05D007594 1.3e-52 209.9 139 71.9
PSO210G6484 Papaver somniferum HOM05D005837 ORTHO05D007594 2.1e-52 209.1 139 75.5
Hund16285 Selenicereus undatus HOM05D005837 ORTHO05D007594 3.6e-52 208.4 133 76.7
HPP92_016352 Vanilla planifolia HOM05D005837 ORTHO05D007594 3.6e-52 208.4 139 70.5
unitig_32.g10697 Utricularia gibba HOM05D005837 ORTHO05D007594 2.0e-50 202.6 139 74.1
Gohir.A11G052200 Gossypium hirsutum HOM05D005837 ORTHO05D007594 1.7e-49 199.5 139 71.9
RcHm_v2.0_Chr3g0453281 Rosa chinensis HOM05D005837 ORTHO05D007594 5.5e-48 194.5 116 80.2
RcHm_v2.0_Chr3g0467111 Rosa chinensis HOM05D005837 ORTHO05D007594 5.5e-48 194.5 116 80.2
SEGI_29496 Sequoiadendron giganteum HOM05D005837 ORTHO05D007594 1.3e-46 189.9 139 69.8
Nitab4.5_0000715g0030 Nicotiana tabacum HOM05D005837 ORTHO05D007594 5.1e-46 188.0 140 70.7
Zm00001eb244760 Zea mays HOM05D005837 ORTHO05D007594 8.7e-46 187.2 139 66.9
Peaxi162Scf00295g01018 Petunia axillaris HOM05D005837 ORTHO05D007594 3.3e-45 185.3 139 68.3
Zm00001eb182830 Zea mays HOM05D005837 ORTHO05D007594 7.4e-45 184.1 139 66.2
MBI10_g33306_MAGBIO Magnolia biondii HOM05D000934 ORTHO05D000746 2.1e-44 182.6 116 73.3
CDE10G0517 Ceratophyllum demersum HOM05D005837 ORTHO05D007594 1.1e-43 180.3 129 65.1
SMO169G0194 Selaginella moellendorffii HOM05D005837 ORTHO05D007594 4.5e-42 174.9 139 63.3
Mapoly0120s0005 Marchantia polymorpha HOM05D005837 ORTHO05D007594 8.4e-41 170.6 139 63.3
Oeu053549.4 Olea europaea HOM05D005837 ORTHO05D007594 1.4e-40 169.9 139 63.3
Nitab4.5_0006967g0030 Nicotiana tabacum HOM05D005837 ORTHO05D007594 3.0e-38 162.2 140 62.9
MBI10_g27985_MAGBIO Magnolia biondii HOM05D000934 ORTHO05D000746 1.1e-35 153.7 115 65.2
Pp3c3_32740 Physcomitrium patens HOM05D005837 ORTHO05D007594 6.9e-35 151.0 140 57.1
CBR_g39403 Chara braunii HOM05D005837 ORTHO05D007594 5.5e-32 141.4 159 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3229 Anthoceros agrestis HOM05D005837 ORTHO05D007594 3.7e-28 128.6 160 43.1
MCO05G725 Micromonas commoda HOM05D005837 ORTHO05D007594 2.2e-12 76.3 141 39.0
COL.COLO4_30268 Corchorus olitorius HOM05D005837 ORTHO05D161296 3.7e-12 75.5 99 46.5


User provided reference genes

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