Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18602 Vaccinium macrocarpon HOM05D005837 ORTHO05D024186 3.1e-81 305.1 155 100.0
Rhsim08G0010400 Rhododendron simsii HOM05D005837 ORTHO05D007594 3.2e-33 145.6 77 96.1
Oeu053549.4 Olea europaea HOM05D005837 ORTHO05D007594 9.3e-33 144.1 77 92.2
Oeu002173.1 Olea europaea HOM05D005837 ORTHO05D007594 2.7e-32 142.5 77 90.9
SGA_v2.0_scaffold34G13592 Striga asiatica HOM05D005837 ORTHO05D007594 4.6e-32 141.7 79 91.1
Peaxi162Scf00295g01018 Petunia axillaris HOM05D005837 ORTHO05D007594 6.0e-32 141.4 79 89.9
Nitab4.5_0000715g0030 Nicotiana tabacum HOM05D005837 ORTHO05D007594 1.8e-31 139.8 79 86.1
Nitab4.5_0006967g0030 Nicotiana tabacum HOM05D005837 ORTHO05D007594 3.0e-31 139.0 77 88.3
Ah.03g143560 Amaranthus hybridus HOM05D005837 ORTHO05D007594 6.7e-31 137.9 77 87.0
Solyc05g051590.3 Solanum lycopersicum HOM05D005837 ORTHO05D007594 1.5e-30 136.7 79 87.3
CSS0040315 Camellia sinensis var. sinensis HOM05D005837 ORTHO05D007594 5.6e-30 134.8 77 89.6
ECA232G4987 Erigeron canadensis HOM05D005837 ORTHO05D007594 5.6e-30 134.8 77 87.0
Hma1.2p1_0047F.1_g027810 Hydrangea macrophylla HOM05D005837 ORTHO05D007594 5.6e-30 134.8 77 88.3
Migut.L00122 Erythranthe guttata HOM05D005837 ORTHO05D007594 7.4e-30 134.4 77 87.0
Sopen05g030040 Solanum pennellii HOM05D005837 ORTHO05D007594 7.4e-30 134.4 79 86.1
PGSC0003DMG400007222 Solanum tuberosum HOM05D005837 ORTHO05D007594 7.4e-30 134.4 79 86.1
GSVIVG01002467001 Vitis vinifera HOM05D005837 ORTHO05D007594 7.4e-30 134.4 77 87.0
Hund16285 Selenicereus undatus HOM05D005837 ORTHO05D007594 1.3e-29 133.7 77 85.7
MSTRG.15711 Avicennia marina HOM05D005837 ORTHO05D007594 1.6e-29 133.3 77 85.7
HanXRQChr10g0305351 Helianthus annuus HOM05D005837 ORTHO05D007594 2.8e-29 132.5 77 84.4
Aqoxy5G01893 Aquilegia oxysepala HOM05D005837 ORTHO05D007594 3.7e-29 132.1 77 85.7
Prupe.6G187000 Prunus persica HOM05D005837 ORTHO05D007594 3.7e-29 132.1 79 84.8
SalBow5G3973 Salvia bowleyana HOM05D005837 ORTHO05D007594 4.8e-29 131.7 77 84.4
SalBow5G4805 Salvia bowleyana HOM05D005837 ORTHO05D007594 4.8e-29 131.7 77 84.4
Actinidia28865 Actinidia chinensis HOM05D005837 ORTHO05D007594 8.1e-29 131.0 77 84.4
MELO3C007756.2 Cucumis melo HOM05D005837 ORTHO05D007594 8.1e-29 131.0 79 84.8
Eucgr.H04785 Eucalyptus grandis HOM05D005837 ORTHO05D007594 8.1e-29 131.0 77 85.7
Lj4g0008298 Lotus japonicus HOM05D005837 ORTHO05D007594 8.1e-29 131.0 77 84.4
TPR.G6228 Trifolium pratense HOM05D005837 ORTHO05D007594 8.1e-29 131.0 77 85.7
Ca_17737_v3 Cicer arietinum L. HOM05D005837 ORTHO05D007594 1.1e-28 130.6 77 87.0
Gohir.A11G052200 Gossypium hirsutum HOM05D005837 ORTHO05D007594 1.1e-28 130.6 77 84.4
Gohir.D11G055600 Gossypium hirsutum HOM05D005837 ORTHO05D007594 1.1e-28 130.6 77 84.4
Gorai.007G060800 Gossypium raimondii HOM05D005837 ORTHO05D007594 1.1e-28 130.6 77 84.4
Thecc.01G101500 Theobroma cacao HOM05D005837 ORTHO05D007594 1.1e-28 130.6 77 84.4
Medtr8g090230 Medicago truncatula HOM05D005837 ORTHO05D007594 1.8e-28 129.8 77 85.7
Potri.005G075600 Populus trichocarpa HOM05D005837 ORTHO05D007594 3.1e-28 129.0 87 77.0
VMungo0251G2060 Vigna mungo HOM05D005837 ORTHO05D007594 3.1e-28 129.0 77 83.1
EL10Ac6g15104 Beta vulgaris HOM05D005837 ORTHO05D007594 4.0e-28 128.6 77 84.4
Ciclev10025805m.g Citrus clementina HOM05D005837 ORTHO05D007594 6.9e-28 127.9 79 79.7
Duzib264G0353 Durio zibethinus HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 81.8
Glyma.08G135800 Glycine max HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 83.1
Nn5g30122 Nelumbo nucifera HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 83.1
PSO210G6484 Papaver somniferum HOM05D005837 ORTHO05D007594 6.9e-28 127.9 76 82.9
PSO447G0182 Papaver somniferum HOM05D005837 ORTHO05D007594 6.9e-28 127.9 76 82.9
Phvul.002G256000 Phaseolus vulgaris HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 84.4
QL06p049517 Quercus lobata HOM05D005837 ORTHO05D007594 6.9e-28 127.9 78 80.8
RcHm_v2.0_Chr2g0113501 Rosa chinensis HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 83.1
TAR376G0564 Trochodendron aralioides HOM05D005837 ORTHO05D007594 6.9e-28 127.9 77 83.1
Atru.chr4.64 Acer truncatum HOM05D005837 ORTHO05D007594 9.0e-28 127.5 77 83.1
MD01G1029800 Malus domestica HOM05D005837 ORTHO05D007594 9.0e-28 127.5 77 81.8
THA.LOC104798971 Tarenaya hassleriana HOM05D005837 ORTHO05D007594 9.0e-28 127.5 77 83.1
CANSAT01G1018 Cannabis sativa HOM05D005837 ORTHO05D007594 1.2e-27 127.1 77 84.4
Sabra05G0062100 Salix brachista HOM05D005837 ORTHO05D007594 1.2e-27 127.1 87 75.9
AUR62002009 Chenopodium quinoa HOM05D005837 ORTHO05D007594 1.5e-27 126.7 85 77.6
Duzib147G0987 Durio zibethinus HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 81.8
FvH4_1g20890 Fragaria vesca HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 81.8
Gohir.A11G201400 Gossypium hirsutum HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 83.1
Gohir.D11G221614 Gossypium hirsutum HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 81.8
Gorai.007G238700 Gossypium raimondii HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 81.8
HanXRQChr09g0260241 Helianthus annuus HOM05D005837 ORTHO05D007594 1.5e-27 126.7 77 83.1
MD15G1324100 Malus domestica HOM05D005837 ORTHO05D007594 1.5e-27 126.7 87 72.4
Sc16g0005040 Simmondsia chinensis HOM05D005837 ORTHO05D007594 2.6e-27 125.9 84 73.8
MBI05_g19355_MAGBIO Magnolia biondii HOM05D005837 ORTHO05D007594 3.4e-27 125.6 77 80.5
Manes.12G134900 Manihot esculenta HOM05D005837 ORTHO05D007594 3.4e-27 125.6 79 78.5
arahy.Tifrunner.gnm1.ann1.UTAL3L Arachis hypogaea HOM05D005837 ORTHO05D007594 4.5e-27 125.2 77 83.1
PGR102G0026 Punica granatum HOM05D005837 ORTHO05D007594 4.5e-27 125.2 77 79.2
Cfa002663 Carpinus fangiana HOM05D005837 ORTHO05D007594 5.8e-27 124.8 77 79.2
Lsat_1_v5_gn_4_141261 Lactuca sativa HOM05D005837 ORTHO05D007594 1.0e-26 124.0 77 85.7
Sp2g28080 Schrenkiella parvula HOM05D005837 ORTHO05D007594 1.3e-26 123.6 79 79.7
BcaC04g23271 Brassica carinata HOM05D005837 ORTHO05D007594 1.7e-26 123.2 77 80.5
C09p10350 Brassica napus HOM05D005837 ORTHO05D007594 1.7e-26 123.2 77 80.5
BolC9t53935H Brassica oleracea HOM05D005837 ORTHO05D007594 1.7e-26 123.2 77 80.5
TWI53G1711 Tripterygium wilfordii HOM05D005837 ORTHO05D007594 1.7e-26 123.2 77 77.9
BcaB02g09852 Brassica carinata HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
BcaB02g09853 Brassica carinata HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
A06p31820 Brassica napus HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
A09p08910 Brassica napus HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
BraA06t26113Z Brassica rapa HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
BraA09t36542Z Brassica rapa HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
Thhalv10004589m.g Eutrema salsugineum HOM05D005837 ORTHO05D007594 2.2e-26 122.9 77 80.5
CARHR293770 Cardamine hirsuta HOM05D005837 ORTHO05D007594 2.9e-26 122.5 87 72.4
COL.COLO4_09964 Corchorus olitorius HOM05D005837 ORTHO05D007594 2.9e-26 122.5 79 81.0
Carub.0008s2584 Capsella rubella HOM05D005837 ORTHO05D007594 3.8e-26 122.1 77 80.5
Lalb_Chr07g0185181 Lupinus albus HOM05D005837 ORTHO05D007594 3.8e-26 122.1 77 80.5
AT5G65000 Arabidopsis thaliana HOM05D005837 ORTHO05D007594 4.9e-26 121.7 77 80.5
BcaC01g02731 Brassica carinata HOM05D005837 ORTHO05D007594 4.9e-26 121.7 77 79.2
C03p61190 Brassica napus HOM05D005837 ORTHO05D007594 4.9e-26 121.7 77 79.2
BolC3t18379H Brassica oleracea HOM05D005837 ORTHO05D007594 4.9e-26 121.7 77 79.2
CiPaw.04G099500 Carya illinoinensis HOM05D005837 ORTHO05D007594 6.5e-26 121.3 77 79.2
unitig_32.g10697 Utricularia gibba HOM05D005837 ORTHO05D007594 6.5e-26 121.3 77 76.6
BcaB04g20002 Brassica carinata HOM05D005837 ORTHO05D007594 8.4e-26 120.9 77 79.2
Zm00001eb244760 Zea mays HOM05D005837 ORTHO05D007594 8.4e-26 120.9 77 79.2
CSS0022010 Camellia sinensis var. sinensis HOM05D005837 ORTHO05D007594 1.1e-25 120.6 77 77.9
Aa31LG1G16930 Aethionema arabicum HOM05D005837 ORTHO05D007594 1.9e-25 119.8 81 76.5
ATR0118G022 Amborella trichopoda HOM05D005837 ORTHO05D007594 2.5e-25 119.4 77 75.3
HPP92_016352 Vanilla planifolia HOM05D005837 ORTHO05D007594 2.5e-25 119.4 77 77.9
TWI77G0214 Tripterygium wilfordii HOM05D005837 ORTHO05D007594 3.2e-25 119.0 76 77.6
AL8G42500 Arabidopsis lyrata HOM05D005837 ORTHO05D007594 4.2e-25 118.6 77 79.2
DCAR_014225 Daucus carota HOM05D005837 ORTHO05D007594 2.7e-24 115.9 77 77.9
Haze_24932 Corylus avellana HOM05D005837 ORTHO05D007594 6.0e-24 114.8 77 76.6
FAN28G0473 Fragaria x ananassa HOM05D005837 ORTHO05D007594 3.9e-23 112.1 77 76.6
SEGI_29496 Sequoiadendron giganteum HOM05D005837 ORTHO05D007594 1.9e-22 109.8 76 75.0
Zm00001eb182830 Zea mays HOM05D005837 ORTHO05D007594 5.7e-22 108.2 107 57.9
SHI29446 Sapria himalayana HOM05D005837 ORTHO05D007594 7.4e-22 107.8 84 63.1
FAN23G0829 Fragaria x ananassa HOM05D005837 ORTHO05D007594 1.6e-21 106.7 117 53.0
AagrBONN_evm.TU.Sc2ySwM_117.3229 Anthoceros agrestis HOM05D005837 ORTHO05D007594 4.8e-21 105.1 116 51.7
ClCG01G018760 Citrullus lanatus HOM05D005837 ORTHO05D007594 8.2e-21 104.4 73 78.1
FAN26G1738 Fragaria x ananassa HOM05D005837 ORTHO05D007594 2.4e-20 102.8 128 49.2
Pp3c3_32740 Physcomitrium patens HOM05D005837 ORTHO05D007594 1.2e-19 100.5 76 64.5
Mapoly0120s0005 Marchantia polymorpha HOM05D005837 ORTHO05D007594 7.6e-19 97.8 76 69.7
Sed0019406 Sechium edule HOM05D005837 ORTHO05D007594 1.0e-18 97.4 61 80.3
CsaV3_6G045430 Cucumis sativus L. HOM05D005837 ORTHO05D007594 1.3e-18 97.1 59 84.7
SMO169G0194 Selaginella moellendorffii HOM05D005837 ORTHO05D007594 1.3e-18 97.1 116 50.9
AUR62003793 Chenopodium quinoa HOM05D005837 ORTHO05D007594 5.0e-18 95.1 52 88.5
Cc07_g15210 Coffea canephora HOM05D005837 ORTHO05D024186 1.9e-17 93.2 52 84.6
CBR_g39403 Chara braunii HOM05D005837 ORTHO05D007594 3.9e-15 85.5 75 58.7
BolC2t11972H Brassica oleracea HOM05D005837 ORTHO05D024186 2.1e-08 63.2 49 61.2
Actinidia28231 Actinidia chinensis HOM05D005837 ORTHO05D007594 2.3e-07 59.7 40 82.5
RcHm_v2.0_Chr3g0453281 Rosa chinensis HOM05D005837 ORTHO05D007594 2.5e-06 56.2 32 75.0


User provided reference genes

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