Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18268 Vaccinium macrocarpon HOM05D000924 ORTHO05D021137 1.1e-190 669.8 339 100.0
Rhsim08G0052100 Rhododendron simsii HOM05D000924 ORTHO05D007614 4.7e-122 441.8 289 79.6
Actinidia35761 Actinidia chinensis HOM05D000924 ORTHO05D007614 7.4e-67 258.5 261 56.7
Dinv35096 Davidia involucrata HOM05D000924 ORTHO05D007614 1.4e-65 254.2 265 56.6
CSS0007254 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D007614 3.4e-64 249.6 270 53.7
Lj7C596T1 Lonicera japonica HOM05D000924 ORTHO05D007614 1.9e-46 190.7 255 48.2
QL02p075347 Quercus lobata HOM05D000924 ORTHO05D007614 1.7e-42 177.6 276 39.9
GSVIVG01032433001 Vitis vinifera HOM05D000924 ORTHO05D007614 1.1e-41 174.9 301 38.2
Haze_14707 Corylus avellana HOM05D000924 ORTHO05D007614 3.1e-41 173.3 265 40.4
CiPaw.03G041700 Carya illinoinensis HOM05D000924 ORTHO05D007614 1.0e-39 168.3 269 42.8
TAR371G0282 Trochodendron aralioides HOM05D037372 ORTHO05D021137 1.5e-38 164.5 252 43.7
Cc07_g01890 Coffea canephora HOM05D000924 ORTHO05D007614 4.2e-38 162.9 236 42.4
Cfa007396 Carpinus fangiana HOM05D000924 ORTHO05D007614 1.6e-37 161.0 265 38.9
Prupe.3G288900 Prunus persica HOM05D000924 ORTHO05D007614 6.7e-36 155.6 262 41.6
Thecc.04G014600 Theobroma cacao HOM05D000924 ORTHO05D007614 1.2e-35 154.8 299 38.1
Sabra16G0227800 Salix brachista HOM05D000924 ORTHO05D007614 1.8e-33 147.5 236 40.3
Ciclev10017496m.g Citrus clementina HOM05D000924 ORTHO05D007614 3.5e-32 143.3 297 34.0
DCAR_021712 Daucus carota HOM05D000924 ORTHO05D007614 5.9e-32 142.5 317 35.6
Lj1g0013932 Lotus japonicus HOM05D000924 ORTHO05D007614 1.0e-31 141.7 264 38.3
Manes.17G114600 Manihot esculenta HOM05D000924 ORTHO05D007614 1.7e-31 141.0 270 35.6
Potri.001G348200 Populus trichocarpa HOM05D000924 ORTHO05D007614 1.7e-31 141.0 241 38.2
MD09G1029100 Malus domestica HOM05D000924 ORTHO05D007614 2.2e-31 140.6 273 37.7
CANSAT64G1924 Cannabis sativa HOM05D000924 ORTHO05D007614 6.5e-31 139.0 249 39.8
Oeu057052.1 Olea europaea HOM05D000924 ORTHO05D007614 1.5e-30 137.9 303 32.0
Aqoxy3G02855 Aquilegia oxysepala HOM05D000924 ORTHO05D007614 4.2e-30 136.3 256 39.5
ECA232G4622 Erigeron canadensis HOM05D000924 ORTHO05D007614 1.6e-29 134.4 246 38.2
Gohir.D04G056500 Gossypium hirsutum HOM05D000924 ORTHO05D007614 4.0e-28 129.8 265 37.4
Atru.chr6.2351 Acer truncatum HOM05D000924 ORTHO05D007614 6.8e-28 129.0 233 41.2
FvH4_6g51100 Fragaria vesca HOM05D000924 ORTHO05D007614 1.5e-27 127.9 264 38.6
Gorai.012G063400 Gossypium raimondii HOM05D000924 ORTHO05D007614 1.5e-27 127.9 265 37.0
ClCG00G002130 Citrullus lanatus HOM05D000924 ORTHO05D007614 5.7e-27 125.9 236 38.6
ClCG09G019150 Citrullus lanatus HOM05D000924 ORTHO05D007614 5.7e-27 125.9 236 38.6
Sc16g0003280 Simmondsia chinensis HOM05D000924 ORTHO05D021137 7.5e-27 125.6 257 37.7
arahy.Tifrunner.gnm1.ann1.MJ9BA4 Arachis hypogaea HOM05D000924 ORTHO05D007614 1.3e-26 124.8 271 36.2
Lalb_Chr10g0093731 Lupinus albus HOM05D000924 ORTHO05D007614 1.3e-26 124.8 261 34.9
RcHm_v2.0_Chr2g0172661 Rosa chinensis HOM05D000924 ORTHO05D007614 1.3e-26 124.8 279 35.8
MELO3C021565.2 Cucumis melo HOM05D000924 ORTHO05D007614 1.1e-25 121.7 246 39.8
FAN09G2855 Fragaria x ananassa HOM05D000924 ORTHO05D007614 1.4e-25 121.3 264 37.5
Sed0024864 Sechium edule HOM05D000924 ORTHO05D007614 1.8e-25 120.9 248 35.9
SalBow8G2728 Salvia bowleyana HOM05D000924 ORTHO05D007614 3.1e-25 120.2 271 35.1
Sc16g0003250 Simmondsia chinensis HOM05D000924 ORTHO05D007614 3.1e-25 120.2 243 37.0
Cpa.g.sc108.48 Carica papaya HOM05D000924 ORTHO05D007614 4.1e-25 119.8 271 35.1
Migut.L01012 Erythranthe guttata HOM05D000924 ORTHO05D007614 2.0e-24 117.5 246 35.8
Peaxi162Scf00129g00137 Petunia axillaris HOM05D000924 ORTHO05D007614 4.5e-24 116.3 252 34.5
Eucgr.J02227 Eucalyptus grandis HOM05D000924 ORTHO05D007614 5.9e-24 115.9 269 33.8
Peaxi162Scf00304g00136 Petunia axillaris HOM05D000924 ORTHO05D007614 1.0e-23 115.2 234 35.5
CAN.G1799.14 Capsicum annuum HOM05D000924 ORTHO05D007614 6.6e-23 112.5 264 34.5
Ca_03851_v3 Cicer arietinum L. HOM05D000924 ORTHO05D007614 6.6e-23 112.5 278 33.8
TWI36G1299 Tripterygium wilfordii HOM05D000924 ORTHO05D007614 6.6e-23 112.5 272 34.9
PSO832G0354 Papaver somniferum HOM05D000924 ORTHO05D007614 8.6e-23 112.1 295 32.5
arahy.Tifrunner.gnm1.ann1.X9WBFE Arachis hypogaea HOM05D000924 ORTHO05D007614 1.9e-22 110.9 261 34.9
Gohir.A05G357600 Gossypium hirsutum HOM05D000924 ORTHO05D007614 1.9e-22 110.9 260 34.2
Solyc02g086580.4 Solanum lycopersicum HOM05D000924 ORTHO05D007614 2.5e-22 110.5 235 37.0
Sopen02g031330 Solanum pennellii HOM05D000924 ORTHO05D007614 2.5e-22 110.5 227 37.4
PSO063G1343 Papaver somniferum HOM05D000924 ORTHO05D007614 3.3e-22 110.2 284 32.7
HanXRQChr09g0255061 Helianthus annuus HOM05D000924 ORTHO05D007614 7.2e-22 109.0 273 31.9
PGSC0003DMG402000479 Solanum tuberosum HOM05D000924 ORTHO05D007614 9.5e-22 108.6 268 34.0
Medtr7g075463 Medicago truncatula HOM05D000924 ORTHO05D007614 1.6e-21 107.8 299 30.8
Nitab4.5_0002682g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 2.8e-21 107.1 270 33.3
Nitab4.5_0009078g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 4.7e-21 106.3 270 33.3
Duzib147G1237 Durio zibethinus HOM05D000924 ORTHO05D007614 6.1e-21 105.9 255 31.4
Glyma.16G072300 Glycine max HOM05D000924 ORTHO05D007614 1.0e-20 105.1 272 33.5
CsaV3_5G027240 Cucumis sativus L. HOM05D000924 ORTHO05D007614 2.3e-20 104.0 240 37.5
Psat3g114520 Pisum sativum HOM05D000924 ORTHO05D007614 3.0e-20 103.6 261 32.2
MBI16_g05479_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D007614 4.0e-20 103.2 170 38.8
Phvul.008G156500 Phaseolus vulgaris HOM05D000924 ORTHO05D007614 5.2e-20 102.8 264 33.0
Aa31LG2G4950 Aethionema arabicum HOM05D000924 ORTHO05D007614 6.8e-20 102.4 239 33.1
TPR.G26947 Trifolium pratense HOM05D000924 ORTHO05D007614 2.0e-19 100.9 300 30.3
SGA_v2.0_scaffold38G15026 Striga asiatica HOM05D000924 ORTHO05D007614 4.4e-19 99.8 182 37.9
VMungo1383G1882 Vigna mungo HOM05D000924 ORTHO05D007614 7.5e-19 99.0 263 31.6
Thhalv10003551m.g Eutrema salsugineum HOM05D000924 ORTHO05D007614 9.8e-19 98.6 236 33.9
COL.COLO4_29060 Corchorus olitorius HOM05D000924 ORTHO05D007614 3.7e-18 96.7 210 34.8
THA.LOC104805379 Tarenaya hassleriana HOM05D000924 ORTHO05D007614 4.9e-18 96.3 234 32.5
Nn3g16792 Nelumbo nucifera HOM05D037372 ORTHO05D021137 8.3e-18 95.5 258 31.4
C02p54450 Brassica napus HOM05D000924 ORTHO05D007614 3.2e-17 93.6 278 32.0
BolC2t11507H Brassica oleracea HOM05D000924 ORTHO05D007614 4.1e-17 93.2 278 32.0
Lsat_1_v5_gn_4_183620 Lactuca sativa HOM05D000924 ORTHO05D007614 7.0e-17 92.4 190 36.8
AL5G17170 Arabidopsis lyrata HOM05D000924 ORTHO05D007614 2.3e-15 87.4 244 31.6
BraA02t08564Z Brassica rapa HOM05D000924 ORTHO05D007614 2.3e-15 87.4 233 31.8
Actinidia18715 Actinidia chinensis HOM05D000924 ORTHO05D021137 2.9e-15 87.0 81 54.3
Carub.0005s0628 Capsella rubella HOM05D000924 ORTHO05D007614 3.9e-15 86.7 232 30.6
Hund13858 Selenicereus undatus HOM05D000924 ORTHO05D007614 3.9e-15 86.7 270 28.9
CARHR149190 Cardamine hirsuta HOM05D000924 ORTHO05D007614 6.6e-15 85.9 246 30.1
A02p35620 Brassica napus HOM05D000924 ORTHO05D007614 8.6e-15 85.5 233 31.3
Sp2g16840 Schrenkiella parvula HOM05D000924 ORTHO05D007614 1.5e-14 84.7 145 38.6
BcaB07g30146 Brassica carinata HOM05D000924 ORTHO05D007614 4.3e-14 83.2 128 41.4
FAN05G3590 Fragaria x ananassa HOM05D000924 ORTHO05D007614 7.3e-14 82.4 148 40.5
unitig_749.g14004 Utricularia gibba HOM05D000924 ORTHO05D007614 3.6e-13 80.1 144 38.2
EL10Ac2g04824 Beta vulgaris HOM05D000924 ORTHO05D007614 1.8e-12 77.8 235 30.6
AUR62022876 Chenopodium quinoa HOM05D000924 ORTHO05D007614 7.5e-11 72.4 233 26.6
AUR62012245 Chenopodium quinoa HOM05D000924 ORTHO05D007614 1.3e-10 71.6 234 27.8
AT3G27730 Arabidopsis thaliana HOM05D000924 ORTHO05D007614 2.7e-08 63.9 230 27.4
Nn4g24978 Nelumbo nucifera HOM05D037372 ORTHO05D021137 6.0e-08 62.8 257 27.6
ATR1152G105 Amborella trichopoda HOM05D000924 ORTHO05D007614 3.9e-07 60.1 128 32.0
Zm00001eb184840 Zea mays HOM05D000924 ORTHO05D007614 9.5e-06 55.5 129 32.6


User provided reference genes

Program Settings