Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 2.8e-181 638.6 362 100.0
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 3.1e-156 555.4 362 90.1
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 1.2e-128 463.8 320 86.6
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 6.4e-125 451.4 322 84.2
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 3.9e-122 442.2 320 82.2
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 1.5e-121 440.3 352 78.4
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 5.6e-121 438.3 318 81.8
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 7.3e-121 438.0 320 80.0
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 9.5e-121 437.6 251 84.1
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 2.1e-120 436.4 271 81.2
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 3.6e-120 435.6 271 79.0
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 1.4e-119 433.7 268 79.5
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 1.8e-119 433.3 318 82.1
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 5.2e-119 431.8 320 81.9
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 8.9e-119 431.0 262 80.9
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.9e-117 426.0 349 74.8
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 4.9e-117 425.2 267 78.7
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 8.3e-117 424.5 268 78.4
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 1.4e-116 423.7 273 77.3
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.4e-116 423.7 322 79.2
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 4.1e-116 422.2 272 76.8
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 1.2e-115 420.6 262 79.4
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 1.6e-115 420.2 302 82.5
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 2.0e-115 419.9 351 62.7
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.7e-114 416.8 247 81.0
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.1e-113 414.1 268 76.5
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.1e-113 414.1 267 77.5
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 3.3e-113 412.5 245 80.8
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 4.3e-113 412.1 267 77.2
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 4.3e-113 412.1 267 77.2
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 4.3e-113 412.1 267 77.2
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 7.3e-113 411.4 269 75.5
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 9.5e-113 411.0 267 77.2
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 9.5e-113 411.0 267 77.2
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.6e-112 410.2 265 76.6
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 2.8e-112 409.5 269 75.1
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 2.8e-112 409.5 314 79.3
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 3.6e-112 409.1 267 76.8
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 6.2e-112 408.3 324 77.2
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 8.1e-112 407.9 265 76.2
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 8.1e-112 407.9 267 76.4
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 8.1e-112 407.9 262 75.6
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 3.1e-111 406.0 247 79.8
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 8.9e-111 404.4 267 76.0
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.5e-110 403.7 247 78.9
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 2.0e-110 403.3 319 79.6
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.6e-110 402.9 263 74.9
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 3.4e-110 402.5 269 75.1
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 2.2e-109 399.8 267 73.4
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 2.9e-109 399.4 341 72.1
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 3.7e-109 399.1 271 72.7
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 1.4e-108 397.1 267 74.5
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.4e-108 397.1 258 77.9
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 7.1e-108 394.8 270 73.3
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 1.6e-107 393.7 270 73.0
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 2.7e-107 392.9 250 76.0
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 7.8e-107 391.3 266 75.6
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 1.3e-106 390.6 266 74.8
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 7.3e-105 384.8 266 73.7
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 9.5e-105 384.4 269 72.9
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.8e-104 382.9 266 73.3
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 5.2e-103 378.6 269 70.6
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 6.8e-103 378.3 272 71.0
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 8.9e-103 377.9 266 72.6
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 1.5e-102 377.1 323 72.1
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 2.0e-102 376.7 312 75.0
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 2.0e-102 376.7 269 71.0
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 5.8e-102 375.2 322 73.6
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 5.8e-102 375.2 268 71.3
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 8.4e-101 371.3 269 70.6
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.1e-100 370.9 318 61.3
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 3.2e-100 369.4 319 70.2
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 5.4e-100 368.6 320 70.6
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.4e-100 368.6 320 68.1
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.4e-100 368.6 320 70.6
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 9.2e-100 367.9 259 71.4
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 1.6e-99 367.1 320 73.8
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 2.7e-99 366.3 319 69.3
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 3.5e-99 365.9 320 70.0
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 6.0e-99 365.2 320 72.2
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 1.3e-98 364.0 268 68.3
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 1.7e-98 363.6 320 72.2
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 5.1e-98 362.1 343 66.5
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 1.9e-97 360.1 269 80.3
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 2.5e-97 359.8 271 68.6
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 5.6e-97 358.6 260 68.5
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 7.3e-97 358.2 320 72.5
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 7.3e-97 358.2 271 68.3
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 2.8e-96 356.3 319 69.9
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 2.8e-96 356.3 313 72.5
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 3.6e-96 355.9 320 71.2
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 6.2e-96 355.1 269 68.8
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 8.1e-96 354.8 268 67.5
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 8.1e-96 354.8 322 69.6
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 8.1e-96 354.8 322 70.2
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 4.0e-95 352.4 322 71.4
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 6.9e-95 351.7 295 74.6
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 2.9e-93 346.3 321 67.9
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 3.8e-93 345.9 263 68.1
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 6.4e-93 345.1 314 66.6
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 2.4e-92 343.2 346 66.8
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 5.4e-92 342.0 321 67.3
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 7.1e-92 341.7 263 66.9
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 1.3e-90 337.4 269 65.8
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.3e-88 330.9 268 65.7
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 6.2e-88 328.6 318 59.4
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 6.9e-87 325.1 268 62.7
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 3.8e-85 319.3 349 64.5
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.4e-84 317.4 239 69.0
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 2.4e-84 316.6 262 61.8
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 4.6e-83 312.4 249 62.7
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.0e-82 311.2 323 54.5
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 2.5e-81 306.6 341 61.3
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 2.8e-80 303.1 199 73.9
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 9.0e-79 298.1 239 64.0
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 5.8e-78 295.4 256 60.2
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 7.6e-78 295.0 263 57.0
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 9.9e-78 294.7 302 60.6
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 4.6e-75 285.8 247 59.5
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 8.7e-74 281.6 228 76.8
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.5e-73 280.8 244 57.4
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 1.1e-71 274.6 250 68.4
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 5.7e-65 252.3 248 63.3
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.4e-63 247.7 199 61.8
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 1.4e-55 221.1 243 48.1
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.8e-55 220.7 147 74.1
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 2.3e-50 203.8 105 87.6
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 2.0e-49 200.7 151 86.8
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 2.5e-44 183.7 179 52.0
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 9.4e-44 181.8 98 84.7
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 3.0e-42 176.8 98 81.6
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 5.2e-42 176.0 140 62.9
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 1.1e-41 174.9 149 59.1
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 1.8e-39 167.5 83 92.8
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 4.1e-39 166.4 102 74.5
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 5.0e-29 132.9 173 48.0
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 3.2e-28 130.2 187 43.9
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 1.0e-26 125.2 275 32.7
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 5.7e-25 119.4 104 55.8
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 5.0e-21 106.3 194 34.5
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 4.2e-20 103.2 188 35.6
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.9e-13 80.5 44 86.4
CAN.G664.4 Capsicum annuum HOM05D003766 ORTHO05D004607 1.0e-10 72.0 41 78.0
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 2.3e-10 70.9 47 66.0
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 4.4e-09 66.6 101 42.6


User provided reference genes

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