Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17756 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 6.6e-249 863.6 443 100.0
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 7.2e-155 551.2 434 70.7
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 2.9e-148 529.3 432 69.4
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 2.3e-145 519.6 432 65.7
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 1.5e-144 516.9 428 66.1
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 1.3e-143 513.8 431 64.7
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 2.8e-143 512.7 433 65.6
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 1.1e-142 510.8 431 65.0
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 5.4e-142 508.4 428 64.7
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 5.4e-142 508.4 432 66.0
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 1.6e-141 506.9 429 66.2
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 4.5e-141 505.4 432 64.8
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.3e-140 503.8 428 65.0
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 1.7e-140 503.4 428 65.0
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 6.6e-140 501.5 432 65.3
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 1.5e-139 500.4 441 62.8
QL01p036487 Quercus lobata HOM05D003893 ORTHO05D005167 7.2e-139 498.0 448 63.6
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 1.2e-138 497.3 441 62.6
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.0e-137 494.2 432 63.2
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 6.8e-137 491.5 431 63.8
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 6.8e-137 491.5 318 82.4
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 8.9e-137 491.1 431 64.5
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.5e-136 490.3 424 63.0
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 1.1e-134 484.2 431 63.1
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 2.4e-134 483.0 431 62.4
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 3.2e-134 482.6 432 61.8
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 2.0e-133 479.9 429 62.7
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 1.0e-132 477.6 431 62.2
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 1.3e-132 477.2 441 61.0
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 2.9e-132 476.1 432 60.9
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 3.9e-132 475.7 432 60.6
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 1.5e-131 473.8 441 58.3
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 3.3e-131 472.6 430 60.9
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 4.3e-131 472.2 428 60.3
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 1.6e-130 470.3 432 59.0
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 1.6e-130 470.3 431 62.4
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 3.6e-130 469.2 432 60.0
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.6e-130 469.2 433 59.4
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 4.7e-130 468.8 433 58.9
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 4.7e-130 468.8 441 58.7
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 4.7e-130 468.8 431 59.9
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 8.0e-130 468.0 433 58.9
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.8e-129 466.8 431 59.6
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 3.1e-129 466.1 431 59.2
TPR.G17142 Trifolium pratense HOM05D003893 ORTHO05D005167 3.1e-129 466.1 432 59.0
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 4.0e-129 465.7 432 60.6
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 4.0e-129 465.7 428 59.1
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 4.0e-129 465.7 431 60.3
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 5.2e-129 465.3 429 59.7
Psat4g075840 Pisum sativum HOM05D003893 ORTHO05D005167 5.2e-129 465.3 433 58.7
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 6.8e-129 464.9 431 59.4
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.2e-128 464.2 441 58.7
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 2.0e-128 463.4 432 59.0
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 2.0e-128 463.4 432 58.8
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 2.6e-128 463.0 431 59.2
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 3.4e-128 462.6 431 58.9
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 3.4e-128 462.6 431 59.9
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 4.4e-128 462.2 432 58.6
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 9.8e-128 461.1 432 58.8
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.3e-127 460.7 431 59.2
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 1.7e-127 460.3 441 58.5
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 2.9e-127 459.5 431 59.2
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 4.9e-127 458.8 423 59.8
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 1.2e-125 454.1 440 56.6
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 3.5e-125 452.6 431 58.5
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.5e-125 452.6 407 62.7
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 1.0e-124 451.1 431 57.8
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 8.6e-124 448.0 433 59.4
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 2.5e-123 446.4 430 59.5
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 6.2e-122 441.8 434 58.5
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 2.6e-120 436.4 433 57.7
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 1.4e-118 430.6 430 56.3
Nitab4.5_0000500g0310 Nicotiana tabacum HOM05D003893 ORTHO05D005167 9.2e-118 427.9 430 57.9
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.9e-115 420.2 431 55.0
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.9e-115 420.2 431 55.0
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 1.6e-114 417.2 429 56.9
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 9.9e-112 407.9 400 58.5
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 1.1e-110 404.4 439 52.4
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.4e-110 404.1 384 59.1
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 7.3e-107 391.7 399 54.6
Haze_08369 Corylus avellana HOM05D003893 ORTHO05D005167 6.4e-103 378.6 335 62.7
Nitab4.5_0009451g0060 Nicotiana tabacum HOM05D003893 ORTHO05D005167 5.4e-102 375.6 361 59.0
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 1.1e-97 361.3 436 52.3
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 2.4e-97 360.1 399 51.6
VMungo0251G0173 Vigna mungo HOM05D003893 ORTHO05D005167 5.1e-92 342.4 320 58.4
Ca_30503_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 2.1e-82 310.5 294 59.5
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 1.9e-75 287.3 446 40.1
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 1.0e-71 275.0 394 45.2
Hund14480 Selenicereus undatus HOM05D003893 ORTHO05D005167 2.2e-71 273.9 334 50.6
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 1.8e-68 264.2 230 63.0
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 5.7e-67 259.2 266 53.4
CBR_g21115 Chara braunii HOM05D003893 ORTHO05D005167 5.1e-60 236.1 400 38.8
Cpa.g.sc2698.1 Carica papaya HOM05D003893 ORTHO05D005167 2.5e-59 233.8 187 67.9
Os03g0100500 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 4.1e-57 226.5 222 54.5
CDE12G0573 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 2.6e-56 223.8 186 64.5
COL.COLO4_04209 Corchorus olitorius HOM05D003893 ORTHO05D005167 3.0e-52 210.3 210 56.7
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 1.7e-42 177.9 472 31.6
SMO364G0317 Selaginella moellendorffii HOM05D003893 ORTHO05D005167 1.8e-41 174.5 186 51.1
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 2.4e-41 174.1 125 72.8
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 3.0e-36 157.1 240 43.3
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 1.2e-35 155.2 93 86.0
Rhsim11G0002000 Rhododendron simsii HOM05D003893 ORTHO05D005167 8.3e-34 149.1 114 71.1
VMungo0251G2254 Vigna mungo HOM05D003893 ORTHO05D005167 1.0e-28 132.1 114 64.0
Haze_08368 Corylus avellana HOM05D003893 ORTHO05D005167 1.8e-28 131.3 93 73.1
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 7.5e-27 125.9 113 61.9
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 4.1e-25 120.2 155 44.5
Cre15.g637350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 3.3e-22 110.5 154 40.3
Ah.07g199170 Amaranthus hybridus HOM05D003893 ORTHO05D005167 1.4e-20 105.1 53 96.2
CSS0024237 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 2.9e-18 97.4 199 36.7
PRCOL_00006953 Prasinoderma coloniale HOM05D003893 ORTHO05D005167 4.9e-18 96.7 475 24.6
COL.COLO4_00031 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.6e-16 91.7 157 38.2


User provided reference genes

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