Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17678 Vaccinium macrocarpon HOM05D004216 ORTHO05D004926 2.6e-310 1068.1 656 100.0
Rhsim08G0137900 Rhododendron simsii HOM05D004216 ORTHO05D004926 2.6e-209 732.6 655 76.6
CSS0006085 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 1.7e-168 597.0 657 65.0
CSS0012337 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 1.7e-168 597.0 657 65.0
Actinidia31032 Actinidia chinensis HOM05D004216 ORTHO05D004926 9.4e-135 485.0 661 55.7
Dinv38590 Davidia involucrata HOM05D004216 ORTHO05D004926 9.4e-127 458.4 683 54.3
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 4.7e-126 456.1 655 52.5
Cfa019828 Carpinus fangiana HOM05D004216 ORTHO05D004926 6.1e-118 429.1 643 51.2
CiPaw.15G126300 Carya illinoinensis HOM05D004216 ORTHO05D004926 1.5e-116 424.5 651 48.5
QL10p022943 Quercus lobata HOM05D004216 ORTHO05D004926 4.1e-114 416.4 651 49.9
Thecc.03G027900 Theobroma cacao HOM05D004216 ORTHO05D004926 1.2e-113 414.8 657 47.0
TWI81G0292 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 1.1e-111 408.3 646 46.6
Manes.05G119100 Manihot esculenta HOM05D004216 ORTHO05D004926 1.6e-110 404.4 687 45.0
Haze_18611 Corylus avellana HOM05D004216 ORTHO05D004926 4.7e-110 402.9 643 50.1
Haze_18610 Corylus avellana HOM05D004216 ORTHO05D004926 3.0e-109 400.2 643 50.4
Duzib205G0916 Durio zibethinus HOM05D004216 ORTHO05D004926 3.4e-108 396.7 657 47.0
Phvul.003G177400 Phaseolus vulgaris HOM05D004216 ORTHO05D004926 2.2e-107 394.0 656 47.1
Sopen03g038630 Solanum pennellii HOM05D004216 ORTHO05D004926 2.2e-107 394.0 719 44.5
Lj9A432G69 Lonicera japonica HOM05D004216 ORTHO05D004926 6.3e-107 392.5 507 60.7
CAN.G438.113 Capsicum annuum HOM05D004216 ORTHO05D004926 8.3e-107 392.1 728 43.5
Prupe.5G217000 Prunus persica HOM05D004216 ORTHO05D004926 8.3e-107 392.1 689 50.8
TAR371G0728 Trochodendron aralioides HOM05D004216 ORTHO05D004926 1.4e-106 391.3 653 46.7
Gohir.D07G042740 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.8e-106 391.0 653 45.6
Cc04_g07550 Coffea canephora HOM05D004216 ORTHO05D004926 5.4e-106 389.4 686 45.2
VMungo1215G1362 Vigna mungo HOM05D004216 ORTHO05D004926 9.2e-106 388.7 658 49.5
Gohir.A07G038666 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.3e-104 384.8 653 45.2
RcHm_v2.0_Chr7g0184581 Rosa chinensis HOM05D004216 ORTHO05D004926 1.3e-104 384.8 685 45.0
Nitab4.5_0001599g0210 Nicotiana tabacum HOM05D004216 ORTHO05D004926 2.3e-104 384.0 734 43.1
COL.COLO4_22716 Corchorus olitorius HOM05D004216 ORTHO05D004926 3.9e-104 383.3 660 51.5
FAN08G0408 Fragaria x ananassa HOM05D004216 ORTHO05D004926 9.5e-103 378.6 687 45.7
Gorai.001G045800 Gossypium raimondii HOM05D004216 ORTHO05D004926 9.5e-103 378.6 653 45.5
PGR044G2306 Punica granatum HOM05D004216 ORTHO05D004926 2.1e-102 377.5 653 46.1
FvH4_5g12730 Fragaria vesca HOM05D004216 ORTHO05D004926 2.8e-102 377.1 702 45.6
FAN18G1390 Fragaria x ananassa HOM05D004216 ORTHO05D004926 3.6e-102 376.7 687 47.6
FAN18G2177 Fragaria x ananassa HOM05D004216 ORTHO05D004926 3.6e-102 376.7 687 47.6
Lj4g0001448 Lotus japonicus HOM05D004216 ORTHO05D004926 6.1e-102 375.9 656 48.2
Aqoxy3G03901 Aquilegia oxysepala HOM05D004216 ORTHO05D004926 1.8e-101 374.4 663 45.7
Glyma.17G121600 Glycine max HOM05D004216 ORTHO05D004926 1.8e-101 374.4 658 46.7
Potri.015G050800 Populus trichocarpa HOM05D004216 ORTHO05D004926 8.9e-101 372.1 650 47.8
Nn4g23713 Nelumbo nucifera HOM05D004216 ORTHO05D004926 1.2e-100 371.7 658 44.7
Ciclev10018514m.g Citrus clementina HOM05D004216 ORTHO05D004926 3.4e-100 370.2 643 45.7
FAN13G0239 Fragaria x ananassa HOM05D004216 ORTHO05D004926 5.8e-100 369.4 686 46.4
ClCG04G011280 Citrullus lanatus HOM05D004216 ORTHO05D004926 9.8e-100 368.6 669 45.6
Nitab4.5_0000410g0130 Nicotiana tabacum HOM05D004216 ORTHO05D004926 1.7e-99 367.9 730 43.3
Cpa.g.sc13.49 Carica papaya HOM05D004216 ORTHO05D004926 8.3e-99 365.5 562 54.3
Lalb_Chr12g0197541 Lupinus albus HOM05D004216 ORTHO05D004926 8.3e-99 365.5 668 47.3
Oeu004769.3 Olea europaea HOM05D004216 ORTHO05D004926 1.2e-97 361.7 475 50.7
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea HOM05D004216 ORTHO05D004926 3.5e-97 360.1 662 46.7
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea HOM05D004216 ORTHO05D004926 7.8e-97 359.0 669 46.9
Peaxi162Scf00015g00072 Petunia axillaris HOM05D004216 ORTHO05D004926 7.8e-97 359.0 764 39.0
Ca_02536_v3 Cicer arietinum L. HOM05D004216 ORTHO05D004926 3.9e-96 356.7 557 49.6
HanXRQChr05g0153841 Helianthus annuus HOM05D004216 ORTHO05D004926 6.6e-96 355.9 652 46.5
Psat4g043600 Pisum sativum HOM05D004216 ORTHO05D004926 1.9e-95 354.4 657 46.1
MELO3C002074.2 Cucumis melo HOM05D004216 ORTHO05D004926 2.5e-95 354.0 674 44.7
Atru.chr9.749 Acer truncatum HOM05D004216 ORTHO05D004926 3.3e-95 353.6 672 50.9
CsaV3_1G006480 Cucumis sativus L. HOM05D004216 ORTHO05D004926 3.6e-94 350.1 653 46.4
TPR.G26791 Trifolium pratense HOM05D004216 ORTHO05D004926 1.8e-93 347.8 558 48.6
Eucgr.K02653 Eucalyptus grandis HOM05D004216 ORTHO05D004926 3.1e-93 347.1 641 43.8
DCAR_001432 Daucus carota HOM05D004216 ORTHO05D004926 4.0e-93 346.7 513 46.4
Lsat_1_v5_gn_5_25060 Lactuca sativa HOM05D004216 ORTHO05D004926 1.7e-91 341.3 635 45.2
Glyma.05G013400 Glycine max HOM05D004216 ORTHO05D004926 8.3e-91 339.0 656 45.0
Sed0006394 Sechium edule HOM05D004216 ORTHO05D004926 2.1e-89 334.3 653 48.9
PSO017G0533 Papaver somniferum HOM05D004216 ORTHO05D004926 5.1e-88 329.7 680 40.3
CANSAT80G0956 Cannabis sativa HOM05D004216 ORTHO05D004926 1.2e-86 325.1 751 43.5
Migut.J01004 Erythranthe guttata HOM05D004216 ORTHO05D004926 1.1e-85 322.0 494 46.4
SalBow3G4568 Salvia bowleyana HOM05D004216 ORTHO05D004926 9.9e-84 315.5 709 39.5
MD06G1211000 Malus domestica HOM05D004216 ORTHO05D004926 2.9e-83 313.9 685 46.6
Hund02527 Selenicereus undatus HOM05D004216 ORTHO05D004926 1.4e-82 311.6 545 49.5
ECA246G5151 Erigeron canadensis HOM05D004216 ORTHO05D004926 3.2e-82 310.5 460 52.2
AUR62032188 Chenopodium quinoa HOM05D004216 ORTHO05D004926 1.2e-81 308.5 751 43.5
PSO478G4514 Papaver somniferum HOM05D004216 ORTHO05D004926 1.2e-81 308.5 668 38.6
Ah.11g047140 Amaranthus hybridus HOM05D004216 ORTHO05D004926 9.6e-79 298.9 528 42.4
Sc10g0009590 Simmondsia chinensis HOM05D004216 ORTHO05D004926 1.2e-78 298.5 699 39.6
Solyc03g119780.4 Solanum lycopersicum HOM05D004216 ORTHO05D004926 2.8e-78 297.4 226 69.9
EL10Ac5g11246 Beta vulgaris HOM05D004216 ORTHO05D004926 1.1e-77 295.4 709 42.7
unitig_578.g15823 Utricularia gibba HOM05D004216 ORTHO05D004926 9.9e-76 288.9 479 42.2
AL2G33790 Arabidopsis lyrata HOM05D004216 ORTHO05D004926 3.8e-75 287.0 518 40.2
AT1G73960 Arabidopsis thaliana HOM05D004216 ORTHO05D004926 4.9e-75 286.6 523 40.9
AUR62036947 Chenopodium quinoa HOM05D004216 ORTHO05D004926 4.6e-73 280.0 565 44.8
CARHR067070 Cardamine hirsuta HOM05D004216 ORTHO05D004926 1.7e-72 278.1 669 37.7
THA.LOC104812129 Tarenaya hassleriana HOM05D004216 ORTHO05D004926 8.7e-72 275.8 660 41.5
Carub.0002s2073 Capsella rubella HOM05D004216 ORTHO05D004926 2.1e-70 271.2 514 38.3
Thhalv10018013m.g Eutrema salsugineum HOM05D004216 ORTHO05D004926 2.8e-70 270.8 512 39.3
ATR0564G329 Amborella trichopoda HOM05D004216 ORTHO05D004926 9.0e-69 265.8 464 42.9
MSTRG.5865 Avicennia marina HOM05D004216 ORTHO05D004926 1.2e-68 265.4 484 44.4
FAN04G0815 Fragaria x ananassa HOM05D004216 ORTHO05D004926 1.2e-68 265.4 443 44.7
C06p48070 Brassica napus HOM05D004216 ORTHO05D004926 3.8e-67 260.4 564 39.9
Sp5g29160 Schrenkiella parvula HOM05D004216 ORTHO05D004926 2.4e-66 257.7 660 36.7
BolC6t39842H Brassica oleracea HOM05D004216 ORTHO05D004926 5.4e-66 256.5 563 39.4
BraA07t31527Z Brassica rapa HOM05D004216 ORTHO05D004926 7.1e-66 256.1 615 38.7
A07p39800 Brassica napus HOM05D004216 ORTHO05D004926 2.7e-65 254.2 615 38.7
GSVIVG01008230001 Vitis vinifera HOM05D004216 ORTHO05D004926 8.1e-62 242.7 201 64.2
HPP92_023478 Vanilla planifolia HOM05D004216 ORTHO05D004926 1.2e-60 238.8 455 38.2
Aa31LG4G4250 Aethionema arabicum HOM05D004216 ORTHO05D004926 4.5e-60 236.9 606 36.3
Zm00001eb312360 Zea mays HOM05D004216 ORTHO05D004926 2.1e-57 228.0 451 37.5
PGSC0003DMG400005622 Solanum tuberosum HOM05D004216 ORTHO05D004926 1.5e-55 221.9 629 34.8
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 1.3e-51 208.8 244 50.0
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.3e-46 192.2 536 41.8
SGA_v2.0_scaffold13G06699 Striga asiatica HOM05D004216 ORTHO05D004926 3.7e-46 190.7 504 35.7
SEGI_21625 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 2.2e-43 181.4 204 50.0
Actinidia39807 Actinidia chinensis HOM05D004216 ORTHO05D004926 5.9e-36 156.8 196 50.0
Medtr1014s0010 Medicago truncatula HOM05D004216 ORTHO05D004926 1.9e-34 151.8 103 71.8
TAR629G2837 Trochodendron aralioides HOM05D004216 ORTHO05D004926 6.9e-29 133.3 156 47.4
Zm00001eb099360 Zea mays HOM05D004216 ORTHO05D004926 1.2e-28 132.5 104 58.7
Pp3c21_15920 Physcomitrium patens HOM05D004216 ORTHO05D004926 3.4e-28 131.0 168 45.2
Pp3c18_6100 Physcomitrium patens HOM05D004216 ORTHO05D004926 3.8e-27 127.5 167 43.7
Mapoly0014s0115 Marchantia polymorpha HOM05D004216 ORTHO05D004926 8.5e-27 126.3 166 40.4
SMO367G1244 Selaginella moellendorffii HOM05D004216 ORTHO05D004926 3.6e-25 120.9 158 43.7
SHI18921 Sapria himalayana HOM05D004216 ORTHO05D004926 1.8e-24 118.6 107 57.0
SHI18919 Sapria himalayana HOM05D004216 ORTHO05D004926 3.1e-21 107.8 148 51.4
MD14G1221600 Malus domestica HOM05D004216 ORTHO05D004926 2.2e-19 101.7 146 46.6
Medtr4g113360 Medicago truncatula HOM05D004216 ORTHO05D004926 3.1e-13 81.3 155 40.0
arahy.Tifrunner.gnm1.ann1.1842CP Arachis hypogaea HOM05D004216 ORTHO05D004926 1.2e-12 79.3 78 56.4
Medtr4g113495 Medicago truncatula HOM05D004216 ORTHO05D004926 2.7e-12 78.2 78 59.0
SalBow8G1216 Salvia bowleyana HOM05D004216 ORTHO05D004926 2.2e-11 75.1 47 78.7
arahy.Tifrunner.gnm1.ann1.CPL525 Arachis hypogaea HOM05D004216 ORTHO05D004926 1.5e-10 72.4 48 68.8


User provided reference genes

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