Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 2.2e-304 1048.1 526 100.0
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 4.8e-275 950.7 509 94.7
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 2.7e-265 918.3 514 91.2
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 5.2e-253 877.5 507 87.2
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 1.7e-248 862.4 493 87.6
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 1.3e-243 846.3 480 87.7
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 2.2e-243 845.5 518 81.9
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 8.3e-243 843.6 465 88.8
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 4.6e-241 837.8 483 85.5
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 7.8e-241 837.0 470 87.4
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 3.0e-240 835.1 461 87.0
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 3.9e-240 834.7 480 84.8
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 4.3e-239 831.2 463 87.7
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 4.3e-239 831.2 463 88.1
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 2.1e-238 828.9 508 81.1
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 2.8e-238 828.6 475 85.9
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 4.7e-238 827.8 470 85.3
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 6.2e-238 827.4 472 85.2
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 6.2e-238 827.4 463 87.3
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 1.4e-237 826.2 508 81.1
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 2.4e-237 825.5 508 80.3
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 3.1e-237 825.1 501 82.4
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 4.0e-237 824.7 508 80.1
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 4.0e-237 824.7 523 79.3
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 5.2e-237 824.3 470 85.7
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 6.8e-237 823.9 472 84.5
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 1.5e-236 822.8 461 87.4
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 2.0e-236 822.4 464 86.0
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 2.0e-236 822.4 518 78.8
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 2.6e-236 822.0 477 83.6
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 2.6e-236 822.0 471 86.4
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 4.4e-236 821.2 525 78.7
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 5.8e-236 820.8 470 86.4
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 9.9e-236 820.1 518 80.3
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 2.2e-235 818.9 484 84.5
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 4.9e-235 817.8 460 86.1
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 6.4e-235 817.4 466 85.6
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 1.4e-234 816.2 459 86.3
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 1.4e-234 816.2 470 84.9
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 1.4e-234 816.2 471 84.5
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 4.2e-234 814.7 479 84.6
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 5.4e-234 814.3 475 82.9
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 7.1e-234 813.9 484 81.4
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 9.3e-234 813.5 491 82.3
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 1.2e-233 813.1 500 79.6
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 1.2e-233 813.1 461 86.3
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 1.6e-233 812.8 468 84.4
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 1.6e-233 812.8 502 80.1
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 3.5e-233 811.6 493 82.2
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 6.0e-233 810.8 463 86.4
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 6.0e-233 810.8 471 82.8
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 6.0e-233 810.8 474 85.7
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 7.8e-233 810.4 464 85.3
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 1.7e-232 809.3 464 84.5
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 3.0e-232 808.5 513 79.1
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 8.7e-232 807.0 487 82.5
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.5e-231 806.2 504 80.0
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 1.5e-231 806.2 466 83.7
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 2.5e-231 805.4 467 84.6
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 2.5e-231 805.4 460 84.8
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 3.3e-231 805.1 500 80.4
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 7.3e-231 803.9 524 76.7
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 1.3e-230 803.1 482 81.7
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 2.8e-230 802.0 522 76.6
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 8.1e-230 800.4 500 80.8
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 1.4e-229 799.7 493 78.7
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 2.0e-228 795.8 467 83.9
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 2.6e-228 795.4 463 83.6
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 5.8e-228 794.3 461 83.5
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 1.3e-227 793.1 511 76.9
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 1.7e-227 792.7 499 78.6
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 1.7e-227 792.7 482 80.9
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 2.2e-227 792.3 459 83.7
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 3.8e-227 791.6 465 82.2
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 6.4e-227 790.8 485 79.0
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 9.3e-226 786.9 478 82.0
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 1.2e-225 786.6 474 80.8
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 7.8e-225 783.9 499 79.2
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 3.0e-224 781.9 488 77.7
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 4.3e-223 778.1 463 79.9
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 1.6e-222 776.2 461 80.3
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 1.6e-222 776.2 461 80.7
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 3.6e-222 775.0 510 76.7
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 8.1e-222 773.9 532 73.5
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 1.1e-221 773.5 499 75.4
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 5.3e-221 771.2 461 79.8
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 5.3e-221 771.2 499 74.9
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 1.5e-220 769.6 461 79.8
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 2.0e-220 769.2 476 77.7
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 5.8e-220 767.7 461 79.4
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 2.2e-219 765.8 479 79.3
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 2.2e-219 765.8 459 80.2
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 2.9e-219 765.4 461 79.4
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 3.8e-219 765.0 504 74.0
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 8.4e-219 763.8 503 74.0
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 1.1e-218 763.5 508 76.0
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 2.4e-218 762.3 469 81.9
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 5.4e-218 761.1 562 68.7
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.6e-217 758.1 506 73.5
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 1.5e-215 753.1 496 74.8
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 3.4e-212 741.9 505 72.9
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 1.9e-210 736.1 477 77.4
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 7.9e-209 730.7 511 71.0
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 1.3e-208 729.9 464 75.2
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 1.6e-206 723.0 459 78.0
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 6.2e-206 721.1 462 75.3
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.4e-205 719.2 411 83.9
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 2.4e-205 719.2 478 73.0
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 5.3e-205 718.0 407 85.0
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 1.7e-203 713.0 446 83.0
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 7.1e-202 707.6 475 72.2
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 5.1e-200 701.4 479 71.4
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 1.6e-198 696.4 463 75.6
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 5.3e-197 691.4 476 75.8
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 2.0e-196 689.5 382 88.7
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 4.5e-196 688.3 422 82.2
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 1.1e-194 683.7 432 76.6
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 1.3e-190 670.2 373 86.1
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 5.3e-189 664.8 373 85.5
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 3.6e-185 652.1 740 51.1
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 1.8e-184 649.8 507 66.5
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 5.1e-184 648.3 494 68.0
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 4.8e-182 641.7 453 66.2
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 4.5e-180 635.2 392 82.7
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 6.7e-176 621.3 425 72.5
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 3.7e-174 615.5 457 69.4
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 6.5e-171 604.7 505 63.2
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.1e-170 604.0 417 77.5
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 2.7e-169 599.4 383 80.4
Lj4C718T1 Lonicera japonica HOM05D004194 ORTHO05D005641 1.3e-123 447.6 271 83.0
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 3.4e-119 433.0 316 70.6
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 1.2e-116 424.5 238 86.1
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 3.1e-104 383.3 293 65.2
C02p04750 Brassica napus HOM05D004194 ORTHO05D005641 7.4e-98 362.1 245 75.9
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 1.7e-94 350.9 449 41.2
HPP92_001149 Vanilla planifolia HOM05D004194 ORTHO05D005641 3.9e-91 339.7 201 82.6
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 7.4e-90 335.5 461 38.8
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 4.2e-85 319.7 454 39.2
Oeu049771.1 Olea europaea HOM05D004194 ORTHO05D005641 1.6e-81 307.8 233 67.8
Ah.06g192250 Amaranthus hybridus HOM05D004194 ORTHO05D005641 1.9e-69 267.7 400 43.0
arahy.Tifrunner.gnm1.ann1.1M3GV3 Arachis hypogaea HOM05D004194 ORTHO05D005641 1.5e-61 241.5 131 86.3
Oeu035352.1 Olea europaea HOM05D004194 ORTHO05D005641 3.0e-59 233.8 146 78.8
Psat6g188680 Pisum sativum HOM05D004194 ORTHO05D005641 1.5e-58 231.5 170 67.1
PSO478G2000 Papaver somniferum HOM05D004194 ORTHO05D005641 7.7e-55 219.2 196 59.7
A02p00760 Brassica napus HOM05D004194 ORTHO05D005641 1.6e-52 211.5 165 66.7
BcaB01g03715 Brassica carinata HOM05D004194 ORTHO05D005641 6.5e-46 189.5 249 44.6
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 3.2e-45 187.2 133 63.9
SEGI_18549 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 4.2e-45 186.8 122 68.9
SEGI_11237 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 3.6e-44 183.7 98 87.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.2e-43 179.9 373 30.8
Psat6g188720 Pisum sativum HOM05D001289 ORTHO05D005641 1.8e-40 171.4 122 68.0
Oeu028023.1 Olea europaea HOM05D004194 ORTHO05D033851 5.4e-40 169.9 90 92.2
Actinidia19243 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.4e-35 155.2 124 61.3
PSO349G0016 Papaver somniferum HOM05D004194 ORTHO05D005641 8.3e-33 146.0 80 86.2
A02p00750 Brassica napus HOM05D004194 ORTHO05D005641 1.2e-31 142.1 93 79.6
Aqoxy84s004 Aquilegia oxysepala HOM05D004194 ORTHO05D077318 1.9e-29 134.8 290 31.0
VMungo0331G0568 Vigna mungo HOM05D004194 ORTHO05D007986 2.8e-28 131.0 100 65.0
BraA02t05060Z Brassica rapa HOM05D004194 ORTHO05D033851 8.0e-28 129.4 74 85.1
VMungo1127G2164 Vigna mungo HOM05D004194 ORTHO05D007986 1.5e-26 125.2 100 64.0
BcaNung01906 Brassica carinata HOM05D004194 ORTHO05D005641 1.9e-13 81.6 58 58.6
Sed0027437 Sechium edule HOM05D004194 ORTHO05D033851 1.6e-12 78.6 41 85.4
Psat6g163800 Pisum sativum HOM05D004194 ORTHO05D037373 2.8e-12 77.8 67 55.2
Psat2g086120 Pisum sativum HOM05D004194 ORTHO05D037373 1.1e-11 75.9 47 70.2
RcHm_v2.0_Chr6g0244231 Rosa chinensis HOM05D004194 ORTHO05D341107 5.2e-11 73.6 61 63.9
Psat3g096720 Pisum sativum HOM05D004194 ORTHO05D324018 1.2e-07 62.4 35 74.3
Psat5g254960 Pisum sativum HOM05D015311 ORTHO05D321322 1.0e-06 59.3 38 76.3
Psat2g086160 Pisum sativum HOM05D004194 ORTHO05D037373 1.7e-06 58.5 34 73.5


User provided reference genes

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