Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 2.2e-79 298.9 152 100.0
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 1.5e-51 206.5 148 75.7
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.9e-47 192.2 148 70.3
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 3.8e-47 191.8 152 67.8
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 5.5e-46 188.0 147 66.7
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 7.2e-46 187.6 147 68.7
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 9.4e-46 187.2 147 68.0
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 1.2e-45 186.8 147 67.3
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 3.6e-45 185.3 147 66.7
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 3.6e-45 185.3 147 66.0
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.6e-45 185.3 148 66.2
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.6e-45 185.3 148 66.9
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 4.7e-45 184.9 147 67.3
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 4.7e-45 184.9 149 66.4
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 7.9e-45 184.1 148 65.5
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 7.9e-45 184.1 158 64.6
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 7.9e-45 184.1 148 66.9
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 1.8e-44 183.0 148 66.9
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 2.3e-44 182.6 147 67.3
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.3e-44 182.6 147 67.3
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 3.0e-44 182.2 149 65.1
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 3.0e-44 182.2 156 64.7
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 3.0e-44 182.2 147 66.7
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 3.9e-44 181.8 145 65.5
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 3.9e-44 181.8 148 65.5
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 5.2e-44 181.4 148 66.2
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 5.2e-44 181.4 148 66.2
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 5.2e-44 181.4 151 65.6
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 5.2e-44 181.4 147 66.7
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 6.7e-44 181.0 150 64.0
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 6.7e-44 181.0 147 66.7
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 8.8e-44 180.6 146 65.8
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 8.8e-44 180.6 146 65.8
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 1.1e-43 180.3 145 64.8
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 1.1e-43 180.3 147 64.6
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.1e-43 180.3 150 64.0
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 1.1e-43 180.3 147 66.0
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.1e-43 180.3 147 66.7
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 1.1e-43 180.3 151 65.6
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 1.1e-43 180.3 149 65.8
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 1.1e-43 180.3 145 66.2
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 1.5e-43 179.9 148 64.9
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 2.0e-43 179.5 144 66.7
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.0e-43 179.5 147 66.7
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 2.0e-43 179.5 148 64.2
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 2.0e-43 179.5 148 64.2
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 2.0e-43 179.5 147 65.3
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 2.6e-43 179.1 152 62.5
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 2.6e-43 179.1 147 64.6
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 2.6e-43 179.1 149 64.4
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 3.3e-43 178.7 146 65.1
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 3.3e-43 178.7 145 65.5
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 3.3e-43 178.7 144 66.0
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 4.4e-43 178.3 147 64.6
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 5.7e-43 177.9 145 64.1
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 5.7e-43 177.9 151 63.6
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 5.7e-43 177.9 147 63.9
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 5.7e-43 177.9 144 65.3
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 7.4e-43 177.6 146 65.8
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 7.4e-43 177.6 151 61.6
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 7.4e-43 177.6 147 64.6
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 9.7e-43 177.2 147 66.7
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 9.7e-43 177.2 148 63.5
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 1.3e-42 176.8 151 62.3
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.7e-42 176.4 146 65.8
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.7e-42 176.4 144 65.3
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.7e-42 176.4 144 65.3
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 2.2e-42 176.0 144 65.3
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 2.8e-42 175.6 144 64.6
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 3.7e-42 175.3 147 62.6
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 3.7e-42 175.3 152 61.8
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 4.8e-42 174.9 144 64.6
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 4.8e-42 174.9 151 60.9
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 4.8e-42 174.9 144 63.9
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 4.8e-42 174.9 147 63.3
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 6.3e-42 174.5 144 63.9
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 6.3e-42 174.5 144 63.9
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 6.3e-42 174.5 147 62.6
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 6.3e-42 174.5 144 63.9
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 6.3e-42 174.5 146 62.3
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 8.2e-42 174.1 138 68.1
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 8.2e-42 174.1 147 61.2
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 1.1e-41 173.7 151 62.9
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 1.1e-41 173.7 147 62.6
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 1.1e-41 173.7 143 62.2
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 1.4e-41 173.3 144 63.9
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 1.4e-41 173.3 144 63.9
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 1.4e-41 173.3 144 63.2
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 1.4e-41 173.3 144 63.9
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 1.4e-41 173.3 144 63.9
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 1.8e-41 172.9 144 63.2
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 1.8e-41 172.9 144 63.2
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 1.8e-41 172.9 151 60.3
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 1.8e-41 172.9 149 61.7
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 2.4e-41 172.6 147 62.6
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 3.1e-41 172.2 144 62.5
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 3.1e-41 172.2 142 62.7
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 3.1e-41 172.2 144 63.2
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 4.1e-41 171.8 149 61.7
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 5.3e-41 171.4 144 63.2
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 5.3e-41 171.4 143 63.6
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 5.3e-41 171.4 144 63.2
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 5.3e-41 171.4 147 61.2
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 7.0e-41 171.0 144 63.9
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 7.0e-41 171.0 147 61.9
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 9.1e-41 170.6 148 60.1
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 9.1e-41 170.6 147 62.6
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 9.1e-41 170.6 143 60.8
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 1.2e-40 170.2 152 63.2
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 1.6e-40 169.9 147 60.5
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 1.6e-40 169.9 142 63.4
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 3.5e-40 168.7 146 61.0
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 3.5e-40 168.7 147 62.6
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 7.7e-40 167.5 153 58.8
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 1.0e-39 167.2 152 61.8
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 1.3e-39 166.8 147 60.5
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 1.7e-39 166.4 146 59.6
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 2.2e-39 166.0 146 58.9
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 2.9e-39 165.6 149 58.4
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 2.9e-39 165.6 147 59.9
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 3.8e-39 165.2 144 62.5
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 5.0e-39 164.9 144 61.1
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 6.5e-39 164.5 144 61.1
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 8.5e-39 164.1 146 60.3
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 1.1e-38 163.7 144 60.4
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 1.9e-38 162.9 147 59.2
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 1.9e-38 162.9 146 58.9
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 3.2e-38 162.2 146 56.8
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 4.2e-38 161.8 144 59.7
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 4.2e-38 161.8 144 59.7
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 7.2e-38 161.0 142 61.3
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 7.2e-38 161.0 142 61.3
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 2.1e-37 159.5 144 59.0
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 4.7e-37 158.3 148 56.1
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 8.0e-37 157.5 144 58.3
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 8.0e-37 157.5 143 58.7
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 2.3e-36 156.0 150 58.0
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 8.8e-36 154.1 147 56.5
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 1.5e-35 153.3 127 65.4
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 7.5e-35 151.0 143 57.3
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 9.7e-35 150.6 144 55.6
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 1.3e-34 150.2 147 56.5
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 3.7e-34 148.7 159 49.7
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 4.8e-34 148.3 147 53.7
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 8.2e-34 147.5 148 54.7
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 5.3e-33 144.8 129 58.9
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 2.0e-32 142.9 144 52.8
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 4.5e-32 141.7 144 52.8
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 5.5e-30 134.8 129 57.4
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 2.6e-27 125.9 146 49.3
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 9.8e-27 124.0 144 45.8
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 4.8e-26 121.7 99 66.7
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.4e-25 120.2 129 55.8
Cre16.g671900 Chlamydomonas reinhardtii HOM05D000811 ORTHO05D004743 1.4e-25 120.2 150 46.7
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 1.4e-25 120.2 77 77.9
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 2.0e-24 116.3 93 62.4
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 3.5e-24 115.5 75 72.0
PSO170G2420 Papaver somniferum HOM05D000811 ORTHO05D004743 5.9e-24 114.8 150 46.0
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 6.5e-23 111.3 95 62.1
DCAR_016616 Daucus carota HOM05D000811 ORTHO05D004743 2.5e-22 109.4 73 74.0
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 3.6e-21 105.5 76 65.8
SEGI_07022 Sequoiadendron giganteum HOM05D000811 ORTHO05D004743 6.1e-21 104.8 110 53.6
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 1.0e-20 104.0 146 42.5
Actinidia22989 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.4e-20 103.6 80 65.0
Nitab4.5_0002096g0060 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.0e-20 102.4 148 43.2
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 4.0e-20 102.1 164 39.6
arahy.Tifrunner.gnm1.ann1.9YI44J Arachis hypogaea HOM05D007334 ORTHO05D004743 5.2e-20 101.7 74 66.2
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 5.2e-20 101.7 75 65.3
MBI07_g03816_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 1.5e-19 100.1 73 64.4
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 1.2e-16 90.5 57 73.7
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 2.0e-16 89.7 75 56.0
Os04g0663800 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 1.0e-15 87.4 102 49.0
Ah.02g124500 Amaranthus hybridus HOM05D000811 ORTHO05D004743 8.6e-15 84.3 62 62.9
Zm00001eb106800 Zea mays HOM05D000811 ORTHO05D004743 1.8e-12 76.6 57 63.2
Sc18g0002580 Simmondsia chinensis HOM05D000811 ORTHO05D004743 5.2e-12 75.1 47 74.5
arahy.Tifrunner.gnm1.ann1.0S2HJN Arachis hypogaea HOM05D007334 ORTHO05D004743 6.8e-12 74.7 109 42.2
Actinidia20649 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.3e-10 70.5 44 79.5


User provided reference genes

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