Gene: COL.COLO4_21930
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_21930
- Transcript Identifier COL.rna20680
- Gene Type Coding gene
- Location AWUE01017831.1 : 95833-97300 : positive
Gene Family Information
- ID HOM05D000811
- #Genes/#Species 728/99
- Phylogenetic origin
- ID ORTHO05D004743
- #Genes/#Species 172/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna20680
- GenBank OMO84655.1
- id gene21902
- gene_name COLO4_21930
- uniprot A0A1R3IPZ2
Descriptions
- Description Peptidyl-prolyl cis-trans isomerase, PpiC-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT2G18040 |
| GO:0032880 | ISO | PLAZA Integrative Orthology | regulation of protein localization | AT2G18040 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT2G18040 |
| GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT2G18040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G18040 |
| GO:0008113 | ISO | PLAZA Homology (enrichment) | peptide-methionine (S)-S-oxide reductase activity | HOM05D000811 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G18040 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G18040 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G18040 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G18040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000297 | Peptidyl-prolyl cis-trans isomerase, PpiC-type |
| Mapman id | Description |
|---|---|
| 18.13.4 | Protein modification.protein folding.peptidyl-prolyl isomerase (Parvulin) |