Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16424 Vaccinium macrocarpon HOM05D002606 ORTHO05D030938 2.7e-161 572.0 306 100.0
Rhsim12G0139800 Rhododendron simsii HOM05D002606 ORTHO05D003016 5.1e-59 232.3 280 57.5
CSS0022111 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.2e-31 141.4 133 66.9
Dinv24630 Davidia involucrata HOM05D002606 ORTHO05D003016 3.2e-29 133.3 140 59.3
Actinidia35112 Actinidia chinensis HOM05D002606 ORTHO05D003016 2.4e-24 117.1 168 48.8
GSVIVG01008397001 Vitis vinifera HOM05D002606 ORTHO05D003016 4.5e-23 112.8 130 49.2
Nitab4.5_0001644g0030 Nicotiana tabacum HOM05D002606 ORTHO05D003016 2.5e-21 107.1 142 47.9
MD14G1234100 Malus domestica HOM05D002606 ORTHO05D003016 5.5e-21 105.9 197 43.7
TWI81G0397 Tripterygium wilfordii HOM05D002606 ORTHO05D003016 1.5e-18 97.8 196 37.2
Peaxi162Scf00683g00215 Petunia axillaris HOM05D002606 ORTHO05D003016 2.6e-18 97.1 161 41.6
Lj5C154T18 Lonicera japonica HOM05D002606 ORTHO05D003016 5.7e-18 95.9 146 50.0
Atru.chr9.958 Acer truncatum HOM05D002606 ORTHO05D003016 7.5e-18 95.5 212 39.6
Solyc03g119070.2 Solanum lycopersicum HOM05D002606 ORTHO05D003016 2.2e-17 94.0 131 46.6
Cfa019693 Carpinus fangiana HOM05D002606 ORTHO05D003016 2.8e-17 93.6 202 40.1
Sabra15G0055700 Salix brachista HOM05D002606 ORTHO05D003016 4.9e-17 92.8 191 39.3
TPR.G1475 Trifolium pratense HOM05D002606 ORTHO05D003016 4.9e-17 92.8 190 37.4
Sopen03g037960 Solanum pennellii HOM05D002606 ORTHO05D003016 1.1e-16 91.7 131 47.3
CiPaw.16G091200 Carya illinoinensis HOM05D002606 ORTHO05D003016 1.4e-16 91.3 212 35.8
Sabra15G0063300 Salix brachista HOM05D002606 ORTHO05D003016 1.8e-16 90.9 191 38.7
QL10p027611 Quercus lobata HOM05D002606 ORTHO05D003016 2.4e-16 90.5 201 35.8
Lalb_Chr24g0398041 Lupinus albus HOM05D002606 ORTHO05D003016 4.5e-15 86.3 255 33.3
Potri.015G041400 Populus trichocarpa HOM05D002606 ORTHO05D003016 7.7e-15 85.5 191 39.3
COL.COLO4_22314 Corchorus olitorius HOM05D002606 ORTHO05D003016 1.0e-14 85.1 202 36.1
Gorai.006G057100 Gossypium raimondii HOM05D002606 ORTHO05D003016 6.6e-14 82.4 203 36.0
Manes.14G169100 Manihot esculenta HOM05D002606 ORTHO05D003016 8.6e-14 82.0 149 39.6
Cc04_g06600 Coffea canephora HOM05D002606 ORTHO05D003016 1.5e-13 81.3 122 50.0
VMungo0464G0918 Vigna mungo HOM05D002606 ORTHO05D003016 1.9e-13 80.9 194 38.1
Phvul.004G151700 Phaseolus vulgaris HOM05D002606 ORTHO05D003016 4.2e-13 79.7 192 37.5
Duzib205G1612 Durio zibethinus HOM05D002606 ORTHO05D003016 5.5e-13 79.3 215 38.1
TAR629G1583 Trochodendron aralioides HOM05D002606 ORTHO05D003016 7.2e-13 79.0 139 43.2
Haze_18795 Corylus avellana HOM05D002606 ORTHO05D003016 4.7e-12 76.3 195 34.9
Lj2g0015801 Lotus japonicus HOM05D002606 ORTHO05D003016 4.7e-12 76.3 223 33.6
Medtr0110s0050 Medicago truncatula HOM05D002606 ORTHO05D003016 4.7e-12 76.3 194 35.6
Hund02332 Selenicereus undatus HOM05D002606 ORTHO05D003016 4.7e-12 76.3 184 35.9
Eucgr.B00858 Eucalyptus grandis HOM05D002606 ORTHO05D003016 6.1e-12 75.9 207 32.9
Nitab4.5_0001158g0110 Nicotiana tabacum HOM05D002606 ORTHO05D003016 6.1e-12 75.9 162 35.2
Sed0024498 Sechium edule HOM05D002606 ORTHO05D003016 1.0e-11 75.1 202 34.2
Thecc.03G047600 Theobroma cacao HOM05D002606 ORTHO05D003016 1.8e-11 74.3 203 36.5
Ciclev10007863m.g Citrus clementina HOM05D002606 ORTHO05D003016 2.3e-11 73.9 289 28.7
Sc10g0009290 Simmondsia chinensis HOM05D002606 ORTHO05D003016 2.3e-11 73.9 130 43.1
Actinidia18908 Actinidia chinensis HOM05D002606 ORTHO05D030938 4.0e-11 73.2 85 52.9
Glyma.07G100600 Glycine max HOM05D002606 ORTHO05D003016 5.2e-11 72.8 192 33.9
Gohir.D09G052500 Gossypium hirsutum HOM05D002606 ORTHO05D003016 1.2e-10 71.6 189 34.9
Psat1g032440 Pisum sativum HOM05D002606 ORTHO05D003016 1.5e-10 71.2 212 34.9
CsaV3_1G007030 Cucumis sativus L. HOM05D002606 ORTHO05D003016 2.6e-10 70.5 175 34.9
Gohir.A09G051500 Gossypium hirsutum HOM05D002606 ORTHO05D003016 3.4e-10 70.1 234 28.2
MELO3C002121.2 Cucumis melo HOM05D002606 ORTHO05D003016 3.7e-09 66.6 288 27.1
Migut.I00455 Erythranthe guttata HOM05D002606 ORTHO05D003016 3.7e-09 66.6 144 39.6
PGSC0003DMG400005737 Solanum tuberosum HOM05D002606 ORTHO05D003016 4.9e-09 66.2 114 41.2
AUR62029960 Chenopodium quinoa HOM05D002606 ORTHO05D003016 4.1e-08 63.2 132 37.1
Prupe.5G230300 Prunus persica HOM05D002606 ORTHO05D003016 4.1e-08 63.2 193 35.2
RcHm_v2.0_Chr7g0178771 Rosa chinensis HOM05D002606 ORTHO05D003016 4.1e-08 63.2 189 33.9
PGR083G1787 Punica granatum HOM05D002606 ORTHO05D003016 9.2e-08 62.0 209 31.1
Cpa.g.sc3.435 Carica papaya HOM05D002606 ORTHO05D030938 5.9e-07 59.3 163 37.4
EL10Ac5g11524 Beta vulgaris HOM05D002606 ORTHO05D003016 1.0e-06 58.5 147 33.3
Nitab4.5_0001644g0080 Nicotiana tabacum HOM05D002606 ORTHO05D003016 2.9e-06 57.0 69 47.8
CANSAT80G0481 Cannabis sativa HOM05D002606 ORTHO05D003016 5.0e-06 56.2 201 37.3


User provided reference genes

Program Settings