Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16328 Vaccinium macrocarpon HOM05D000131 ORTHO05D025807 6.7e-34 146.7 72 100.0
vmacro16330 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 3.5e-27 124.4 70 87.1
Rhsim12G0130200 Rhododendron simsii HOM05D000131 ORTHO05D000086 1.0e-18 96.3 66 71.2
CSS0030050 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 7.7e-14 80.1 63 61.9
CSS0048783 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 7.7e-14 80.1 63 61.9
CSS0025618 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 2.2e-13 78.6 64 56.2
QL03p065544 Quercus lobata HOM05D000131 ORTHO05D000086 1.1e-12 76.3 66 54.5
Actinidia31184 Actinidia chinensis HOM05D000131 ORTHO05D000086 3.6e-11 71.2 51 62.7
Sed0000677 Sechium edule HOM05D000131 ORTHO05D000086 1.0e-10 69.7 57 50.9
Eucgr.G02541 Eucalyptus grandis HOM05D000131 ORTHO05D000086 1.4e-10 69.3 61 50.8
Rhsim12G0057600 Rhododendron simsii HOM05D000131 ORTHO05D000086 1.4e-10 69.3 55 58.2
GSVIVG01011348001 Vitis vinifera HOM05D000131 ORTHO05D000086 1.4e-10 69.3 71 46.5
TAR622G0931 Trochodendron aralioides HOM05D000131 ORTHO05D000086 3.9e-10 67.8 71 46.5
Cfa007515 Carpinus fangiana HOM05D000131 ORTHO05D000086 5.1e-10 67.4 55 54.5
CsaV3_1G007900 Cucumis sativus L. HOM05D000131 ORTHO05D000086 8.8e-10 66.6 61 49.2
Dinv06517 Davidia involucrata HOM05D000131 ORTHO05D000086 8.8e-10 66.6 64 45.3
Dinv34206 Davidia involucrata HOM05D000131 ORTHO05D000086 1.1e-09 66.2 45 64.4
vmacro01231 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 1.1e-09 66.2 61 50.8
Haze_14580 Corylus avellana HOM05D000131 ORTHO05D000086 2.0e-09 65.5 55 54.5
Lj4g0005471 Lotus japonicus HOM05D000131 ORTHO05D000086 3.3e-09 64.7 68 41.2
GSVIVG01008053001 Vitis vinifera HOM05D000131 ORTHO05D000086 3.3e-09 64.7 58 48.3
CiPaw.06G081100 Carya illinoinensis HOM05D000131 ORTHO05D000086 5.7e-09 63.9 68 50.0
PGR083G1983 Punica granatum HOM05D000131 ORTHO05D000086 7.4e-09 63.5 68 44.1
PGR119G1359 Punica granatum HOM05D000131 ORTHO05D000086 7.4e-09 63.5 72 44.4
Duzib251G0120 Durio zibethinus HOM05D000131 ORTHO05D000086 9.7e-09 63.2 57 49.1
QL02p080671 Quercus lobata HOM05D000131 ORTHO05D000086 9.7e-09 63.2 65 50.8
MBI02_g27730_MAGBIO Magnolia biondii HOM05D000131 ORTHO05D000086 1.3e-08 62.8 54 44.4
ClCG01G014420 Citrullus lanatus HOM05D000131 ORTHO05D000086 1.7e-08 62.4 64 45.3
DCAR_007134 Daucus carota HOM05D000131 ORTHO05D000086 2.8e-08 61.6 53 52.8
Duzib147G0289 Durio zibethinus HOM05D000131 ORTHO05D000086 3.7e-08 61.2 56 50.0
Gohir.A03G181500 Gossypium hirsutum HOM05D000131 ORTHO05D000086 3.7e-08 61.2 56 51.8
CiPaw.05G139300 Carya illinoinensis HOM05D000131 ORTHO05D000086 4.8e-08 60.8 67 46.3
Gohir.D02G202100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 4.8e-08 60.8 56 51.8
Gorai.005G227000 Gossypium raimondii HOM05D000131 ORTHO05D000086 4.8e-08 60.8 56 51.8
Nitab4.5_0000879g0100 Nicotiana tabacum HOM05D000131 ORTHO05D000086 4.8e-08 60.8 66 47.0
Aqoxy3G00751 Aquilegia oxysepala HOM05D000131 ORTHO05D000086 8.2e-08 60.1 55 50.9
Cpa.g.sc17.208 Carica papaya HOM05D000131 ORTHO05D000086 8.2e-08 60.1 64 45.3
Rhsim08G0066400 Rhododendron simsii HOM05D000131 ORTHO05D000086 8.2e-08 60.1 52 48.1
Nitab4.5_0009895g0040 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.1e-07 59.7 70 41.4
Nitab4.5_0010498g0020 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.1e-07 59.7 66 45.5
Thecc.02G354500 Theobroma cacao HOM05D000131 ORTHO05D000086 1.1e-07 59.7 65 46.2
CANSAT64G1917 Cannabis sativa HOM05D000131 ORTHO05D000086 1.4e-07 59.3 59 44.1
Duzib187G1451 Durio zibethinus HOM05D000131 ORTHO05D000086 1.4e-07 59.3 56 50.0
Gohir.A01G058300 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.4e-07 59.3 54 50.0
Gohir.A03G065100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.4e-07 59.3 56 44.6
Peaxi162Scf00013g00034 Petunia axillaris HOM05D000131 ORTHO05D000086 1.4e-07 59.3 58 44.8
Phvul.009G189800 Phaseolus vulgaris HOM05D000131 ORTHO05D000086 1.8e-07 58.9 62 40.3
Duzib084G0038 Durio zibethinus HOM05D000131 ORTHO05D000086 2.4e-07 58.5 56 44.6
Manes.01G189700 Manihot esculenta HOM05D000131 ORTHO05D000086 2.4e-07 58.5 57 45.6
Nitab4.5_0000141g0370 Nicotiana tabacum HOM05D000131 ORTHO05D000086 2.4e-07 58.5 65 44.6
TWI60G0028 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 2.4e-07 58.5 58 46.6
CSS0005293 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 3.1e-07 58.2 67 40.3
Hma1.2p1_0449F.1_g155060 Hydrangea macrophylla HOM05D000131 ORTHO05D000086 3.1e-07 58.2 53 49.1
Nitab4.5_0000274g0020 Nicotiana tabacum HOM05D000131 ORTHO05D000086 3.1e-07 58.2 58 46.6
Nitab4.5_0001631g0040 Nicotiana tabacum HOM05D000131 ORTHO05D000086 3.1e-07 58.2 58 46.6
PSO478G1286 Papaver somniferum HOM05D000131 ORTHO05D000086 3.1e-07 58.2 57 43.9
vmacro18209 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 3.1e-07 58.2 51 47.1
Cfa009026 Carpinus fangiana HOM05D000131 ORTHO05D000086 4.1e-07 57.8 57 49.1
Duzib264G0102 Durio zibethinus HOM05D000131 ORTHO05D000086 4.1e-07 57.8 56 51.8
Gohir.D01G044600 Gossypium hirsutum HOM05D000131 ORTHO05D000086 4.1e-07 57.8 53 49.1
Gorai.002G064100 Gossypium raimondii HOM05D000131 ORTHO05D000086 4.1e-07 57.8 53 49.1
Medtr4g107870 Medicago truncatula HOM05D000131 ORTHO05D000086 4.1e-07 57.8 68 39.7
Thecc.03G080000 Theobroma cacao HOM05D000131 ORTHO05D000086 4.1e-07 57.8 56 42.9
Thecc.04G075400 Theobroma cacao HOM05D000131 ORTHO05D000086 4.1e-07 57.8 56 48.2
TWI34G0879 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 4.1e-07 57.8 64 43.8
TAR629G0938 Trochodendron aralioides HOM05D000131 ORTHO05D000086 4.1e-07 57.8 48 52.1
CSS0013029 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 5.3e-07 57.4 73 39.7
CAN.G1711.10 Capsicum annuum HOM05D000131 ORTHO05D000086 5.3e-07 57.4 64 42.2
Gohir.A04G016100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 5.3e-07 57.4 54 48.1
Gorai.006G037300 Gossypium raimondii HOM05D000131 ORTHO05D000086 6.9e-07 57.0 56 50.0
RcHm_v2.0_Chr7g0180651 Rosa chinensis HOM05D000131 ORTHO05D000086 6.9e-07 57.0 70 42.9
Solyc02g031960.3 Solanum lycopersicum HOM05D000131 ORTHO05D025807 6.9e-07 57.0 67 41.8
Sopen02g010220 Solanum pennellii HOM05D000131 ORTHO05D025807 6.9e-07 57.0 67 41.8
GSVIVG01020067001 Vitis vinifera HOM05D000131 ORTHO05D000086 6.9e-07 57.0 66 39.4
Gohir.A04G148100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 9.1e-07 56.6 71 38.0
Nitab4.5_0000269g0150 Nicotiana tabacum HOM05D000131 ORTHO05D000086 9.1e-07 56.6 52 46.2
PSO017G2562 Papaver somniferum HOM05D000131 ORTHO05D000086 9.1e-07 56.6 57 42.1
TPR.G38420 Trifolium pratense HOM05D000131 ORTHO05D025807 9.1e-07 56.6 62 41.9
GSVIVG01020068001 Vitis vinifera HOM05D000131 ORTHO05D000086 9.1e-07 56.6 71 36.6
CSS0014857 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 1.2e-06 56.2 64 40.6
Haze_12043 Corylus avellana HOM05D000131 ORTHO05D000086 1.2e-06 56.2 57 47.4
Gohir.D05G370800 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.2e-06 56.2 54 50.0
Gorai.009G439300 Gossypium raimondii HOM05D000131 ORTHO05D000086 1.2e-06 56.2 54 50.0
Lj7C401T6 Lonicera japonica HOM05D000131 ORTHO05D000086 1.2e-06 56.2 55 47.3
Nitab4.5_0002752g0040 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.2e-06 56.2 65 44.6
COL.COLO4_25167 Corchorus olitorius HOM05D000131 ORTHO05D000086 1.5e-06 55.8 55 43.6
Prupe.3G271600 Prunus persica HOM05D000131 ORTHO05D000086 1.5e-06 55.8 62 38.7
CAN.G628.38 Capsicum annuum HOM05D000131 ORTHO05D000086 2.0e-06 55.5 60 46.7
Eucgr.G02162 Eucalyptus grandis HOM05D000131 ORTHO05D000086 2.0e-06 55.5 59 44.1
Gohir.D03G091400 Gossypium hirsutum HOM05D000131 ORTHO05D000086 2.0e-06 55.5 56 41.1
Gorai.003G094800 Gossypium raimondii HOM05D000131 ORTHO05D000086 2.0e-06 55.5 56 41.1
MD09G1047400 Malus domestica HOM05D000131 ORTHO05D000086 2.0e-06 55.5 65 38.5
Dinv33720 Davidia involucrata HOM05D000131 ORTHO05D000086 2.6e-06 55.1 61 45.9
Gohir.D04G192400 Gossypium hirsutum HOM05D000131 ORTHO05D000086 2.6e-06 55.1 64 40.6
Gohir.D09G032366 Gossypium hirsutum HOM05D000131 ORTHO05D000086 2.6e-06 55.1 72 41.7
Gorai.012G187800 Gossypium raimondii HOM05D000131 ORTHO05D000086 2.6e-06 55.1 64 40.6
Nn3g17138 Nelumbo nucifera HOM05D000131 ORTHO05D000086 2.6e-06 55.1 57 43.9
Nn4g23058 Nelumbo nucifera HOM05D000131 ORTHO05D000086 2.6e-06 55.1 59 45.8
Nitab4.5_0000564g0360 Nicotiana tabacum HOM05D000131 ORTHO05D000086 2.6e-06 55.1 57 43.9
Sopen01g006390 Solanum pennellii HOM05D000131 ORTHO05D000086 2.6e-06 55.1 65 44.6
VMungo1309G0715 Vigna mungo HOM05D000131 ORTHO05D000086 2.6e-06 55.1 57 42.1
Eucgr.J02132 Eucalyptus grandis HOM05D000131 ORTHO05D000086 3.4e-06 54.7 59 42.4
MD14G1195000 Malus domestica HOM05D000131 ORTHO05D025807 3.4e-06 54.7 64 42.2
Solyc01g010740.4 Solanum lycopersicum HOM05D000131 ORTHO05D000086 3.4e-06 54.7 65 44.6
COL.COLO4_05914 Corchorus olitorius HOM05D000131 ORTHO05D000086 4.5e-06 54.3 57 45.6
Gohir.A04G015550 Gossypium hirsutum HOM05D000131 ORTHO05D000086 4.5e-06 54.3 54 48.1
Gorai.009G439800 Gossypium raimondii HOM05D000131 ORTHO05D000086 4.5e-06 54.3 54 48.1
Nitab4.5_0009739g0040 Nicotiana tabacum HOM05D000131 ORTHO05D000086 4.5e-06 54.3 57 43.9
PGSC0003DMG400033070 Solanum tuberosum HOM05D000131 ORTHO05D000086 4.5e-06 54.3 61 41.0
arahy.Tifrunner.gnm1.ann1.YDM37B Arachis hypogaea HOM05D000131 ORTHO05D000086 5.9e-06 53.9 54 40.7
CSS0024842 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 5.9e-06 53.9 61 39.3
Gohir.D05G370500 Gossypium hirsutum HOM05D000131 ORTHO05D000086 5.9e-06 53.9 54 48.1
Gorai.009G438700 Gossypium raimondii HOM05D000131 ORTHO05D000086 5.9e-06 53.9 54 48.1
MD06G1188600 Malus domestica HOM05D000131 ORTHO05D000086 5.9e-06 53.9 65 47.7
MD17G1047500 Malus domestica HOM05D000131 ORTHO05D000086 5.9e-06 53.9 65 38.5
HPP92_024071 Vanilla planifolia HOM05D000131 ORTHO05D000086 5.9e-06 53.9 64 42.2
Glyma.04G173900 Glycine max HOM05D000131 ORTHO05D000086 7.7e-06 53.5 62 38.7
Gorai.009G439500 Gossypium raimondii HOM05D000131 ORTHO05D000086 7.7e-06 53.5 54 48.1
PGSC0003DMG402000859 Solanum tuberosum HOM05D000131 ORTHO05D000086 7.7e-06 53.5 65 41.5


User provided reference genes

Program Settings