Gene: COL.COLO4_05914

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05914
  • Transcript Identifier COL.rna4735
  • Gene Type Coding gene
  • Location AWUE01012513.1 : 25074-26791 : negative

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4735
  • GenBank OMP08999.1
  • id gene5886
  • gene_name COLO4_05914
  • uniprot A0A1R3KPN1

Descriptions

  • Description Pectate lyase/Amb allergen
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
GOA Databasepectate lyase activity
GO:0030570
IEA
InterPropectate lyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002022 Pectate lyase
IPR018082 AmbAllergen
IPR012334 Pectin lyase fold
IPR045032 Pectin lyase family
IPR011050 Pectin lyase fold/virulence factor
IPR007524 Pectate lyase, N-terminal
Mapman id Description
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase