Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.1e-119 433.3 215 100.0
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 8.5e-69 264.2 218 68.8
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.9e-56 222.6 213 61.0
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.6e-53 211.1 233 54.5
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 8.9e-50 201.1 225 53.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 8.9e-50 201.1 225 53.8
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 6.8e-42 174.9 211 51.7
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 6.8e-42 174.9 223 51.6
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 8.9e-42 174.5 204 52.5
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.2e-41 174.1 197 52.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 2.0e-41 173.3 157 56.7
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 2.6e-41 172.9 145 61.4
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 7.5e-41 171.4 225 48.4
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.3e-40 170.6 205 49.8
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.7e-40 170.2 227 47.6
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.7e-40 170.2 208 52.4
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.2e-40 169.9 190 54.7
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-40 169.5 194 53.6
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.7e-40 169.1 205 47.8
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.7e-40 169.1 220 50.0
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 4.9e-40 168.7 185 53.0
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 6.4e-40 168.3 194 52.6
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 8.3e-40 167.9 198 50.5
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 1.1e-39 167.5 208 48.6
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.4e-39 167.2 196 51.5
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.9e-39 166.8 136 61.0
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.9e-39 166.8 136 61.0
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.4e-39 166.4 188 51.1
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.4e-39 166.4 197 51.3
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.2e-39 166.0 135 60.7
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 4.1e-39 165.6 204 52.0
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 4.1e-39 165.6 154 59.1
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 5.4e-39 165.2 202 49.5
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 9.2e-39 164.5 158 56.3
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.2e-38 164.1 199 52.8
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.2e-38 164.1 191 52.4
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.6e-38 163.7 203 51.2
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.6e-38 163.7 192 51.6
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 2.1e-38 163.3 197 52.3
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.5e-38 162.5 195 49.2
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 4.6e-38 162.2 180 52.2
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.6e-38 162.2 195 50.8
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 1.3e-37 160.6 132 59.8
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 1.3e-37 160.6 132 59.8
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.3e-37 160.6 137 59.9
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.3e-37 160.6 188 52.1
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.3e-37 160.6 184 51.6
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.3e-37 160.6 145 56.6
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.7e-37 160.2 195 50.3
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.7e-37 160.2 198 49.0
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.3e-37 159.8 138 59.4
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.3e-37 159.8 138 59.4
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.3e-37 159.8 205 47.8
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 3.0e-37 159.5 138 59.4
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 3.0e-37 159.5 138 59.4
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 3.0e-37 159.5 207 47.3
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 3.0e-37 159.5 130 60.0
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.9e-37 159.1 153 54.2
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 3.9e-37 159.1 197 48.7
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.9e-37 159.1 194 51.0
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 3.9e-37 159.1 196 48.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 5.1e-37 158.7 130 60.0
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 5.1e-37 158.7 130 60.0
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 5.1e-37 158.7 188 50.0
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 6.6e-37 158.3 201 48.8
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 8.6e-37 157.9 196 49.5
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 8.6e-37 157.9 148 54.7
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 8.6e-37 157.9 156 53.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 8.6e-37 157.9 153 56.2
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.1e-36 157.5 184 51.1
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-36 157.5 141 57.4
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.5e-36 157.1 130 60.0
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.5e-36 157.1 184 51.1
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.5e-36 157.1 198 47.0
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.9e-36 156.8 139 58.3
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.9e-36 156.8 214 46.3
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.9e-36 156.8 213 46.0
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 3.3e-36 156.0 194 48.5
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.3e-36 156.0 139 58.3
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 7.3e-36 154.8 174 50.6
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 7.3e-36 154.8 144 58.3
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.2e-35 154.1 195 46.7
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.2e-35 154.1 192 48.4
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 3.6e-35 152.5 184 50.5
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 6.2e-35 151.8 196 49.0
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.1e-34 151.0 183 48.1
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.3e-34 149.8 180 50.6
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 3.1e-34 149.4 224 45.5
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 4.0e-34 149.1 139 56.1
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 5.2e-34 148.7 132 58.3
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 6.8e-34 148.3 188 47.3
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.5e-33 147.1 136 55.9
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 7.6e-33 144.8 138 55.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 7.6e-33 144.8 138 55.1
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 1.3e-32 144.1 153 51.6
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.7e-32 143.7 129 55.0
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.4e-31 139.8 190 44.2
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.5e-28 129.8 119 55.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.4e-26 123.2 143 47.6
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.5e-25 120.6 158 46.2
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 2.0e-25 120.2 61 85.2
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 3.4e-25 119.4 152 42.8
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 9.9e-25 117.9 68 77.9
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.7e-24 117.1 130 46.9
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.9e-24 116.3 141 48.2
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 3.8e-24 115.9 194 38.1
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 6.4e-24 115.2 197 39.6
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 8.4e-24 114.8 130 46.2
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.1e-23 114.4 133 45.9
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 1.4e-23 114.0 128 49.2
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.4e-23 114.0 125 47.2
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.4e-23 113.2 135 43.0
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 7.1e-23 111.7 134 48.5
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 9.3e-23 111.3 124 46.8
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.2e-22 110.9 123 48.8
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.6e-22 110.5 155 42.6
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.6e-22 110.5 180 38.3
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 2.1e-22 110.2 124 47.6
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 2.1e-22 110.2 142 43.7
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.7e-22 109.8 122 49.2
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 1.0e-21 107.8 211 39.3
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 1.0e-21 107.8 181 39.8
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.0e-21 107.8 176 39.2
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.7e-21 107.1 146 42.5
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.7e-21 107.1 208 36.5
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.7e-21 107.1 67 71.6
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.3e-21 106.7 144 43.8
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.3e-21 106.7 129 48.8
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.3e-21 106.7 124 46.8
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.3e-21 106.7 153 40.5
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.0e-21 106.3 143 42.0
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.0e-21 106.3 147 43.5
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.0e-21 106.3 158 41.1
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 3.9e-21 105.9 125 47.2
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 5.1e-21 105.5 174 38.5
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 8.7e-21 104.8 124 42.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 1.1e-20 104.4 130 43.1
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.1e-20 104.4 130 43.1
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.1e-20 104.4 130 43.8
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.1e-20 104.4 151 40.4
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.9e-20 103.6 131 44.3
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 2.5e-20 103.2 131 43.5
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.5e-20 103.2 129 42.6
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 4.3e-20 102.4 122 45.9
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.6e-20 101.3 130 42.3
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.3e-19 100.9 132 40.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 2.1e-19 100.1 158 40.5
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.8e-19 99.8 162 40.7
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.6e-19 99.4 219 37.0
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.6e-19 99.4 139 40.3
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 6.2e-19 98.6 60 70.0
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.4e-18 96.7 265 31.7
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.5e-17 94.0 113 47.8
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 3.4e-17 92.8 145 42.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 4.5e-17 92.4 123 44.7
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 5.8e-17 92.0 123 43.9
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 9.9e-17 91.3 113 45.1
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.7e-16 90.5 140 38.6
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 3.8e-16 89.4 183 34.4
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.8e-16 89.4 291 29.2
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.9e-16 89.0 125 38.4
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 4.9e-16 89.0 155 36.8
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.9e-15 87.0 127 42.5
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 1.9e-15 87.0 63 60.3
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 4.2e-15 85.9 202 32.7
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.1e-12 77.8 156 35.9
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.1e-11 71.6 81 46.9
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 9.0e-10 68.2 146 32.9
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 2.7e-06 56.6 47 55.3


User provided reference genes

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