Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15990 Vaccinium macrocarpon HOM05D003504 ORTHO05D004006 1.2e-61 239.6 118 100.0
Rhsim09G0069300 Rhododendron simsii HOM05D003504 ORTHO05D004006 3.6e-21 105.1 71 78.9
Actinidia04335 Actinidia chinensis HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
CSS0012196 Camellia sinensis var. sinensis HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
DCAR_001249 Daucus carota HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
Dinv25490 Davidia involucrata HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
Dinv42441 Davidia involucrata HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
Migut.H02557 Erythranthe guttata HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
SGA_v2.0_scaffold161G37832 Striga asiatica HOM05D003504 ORTHO05D004006 2.9e-18 95.5 49 100.0
SalBow1G2205 Salvia bowleyana HOM05D003504 ORTHO05D004006 3.8e-18 95.1 111 55.0
Ah.15g092010 Amaranthus hybridus HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Aqoxy3G00583 Aquilegia oxysepala HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
CDE08G0995 Ceratophyllum demersum HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Cc03_g16320 Coffea canephora HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
COL.COLO4_11259 Corchorus olitorius HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Duzib251G0447 Durio zibethinus HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
ECA246G2710 Erigeron canadensis HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Gohir.A12G174251 Gossypium hirsutum HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Gohir.D12G176932 Gossypium hirsutum HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Gorai.008G189300 Gossypium raimondii HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
HanXRQChr06g0171691 Helianthus annuus HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
HanXRQChr17g0541121 Helianthus annuus HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Lsat_1_v5_gn_3_34601 Lactuca sativa HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Lj3C843G5 Lonicera japonica HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Oeu038381.1 Olea europaea HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Thecc.02G366300 Theobroma cacao HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
TWI60G1460 Tripterygium wilfordii HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
TAR376G1097 Trochodendron aralioides HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
GSVIVG01014992001 Vitis vinifera HOM05D003504 ORTHO05D004006 1.1e-17 93.6 49 98.0
Atru.chr8.1046 Acer truncatum HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 95.9
MSTRG.21739 Avicennia marina HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 95.9
Ciclev10010893m.g Citrus clementina HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 95.9
Nitab4.5_0001070g0090 Nicotiana tabacum HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 98.0
Peaxi162Scf01205g00192 Petunia axillaris HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 98.0
Solyc08g016060.1 Solanum lycopersicum HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 98.0
Sopen08g006320 Solanum pennellii HOM05D003504 ORTHO05D004006 1.4e-17 93.2 49 98.0
arahy.Tifrunner.gnm1.ann1.G058EZ Arachis hypogaea HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
arahy.Tifrunner.gnm1.ann1.S8BAEK Arachis hypogaea HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
CANSAT80G2607 Cannabis sativa HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Cfa019400 Carpinus fangiana HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
CiPaw.11G060700 Carya illinoinensis HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Ca_24184_v3 Cicer arietinum L. HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
ClCG09G022710 Citrullus lanatus HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Haze_07798 Corylus avellana HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
MELO3C012607.2 Cucumis melo HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
CsaV3_7G022910 Cucumis sativus L. HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Glyma.08G148300 Glycine max HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Glyma.15G212800 Glycine max HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Lj3g0024547 Lotus japonicus HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Medtr8g056900 Medicago truncatula HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Phvul.011G177600 Phaseolus vulgaris HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Psat4g137560 Pisum sativum HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
QL04p084696 Quercus lobata HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
Sed0010866 Sechium edule HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
TPR.G9397 Trifolium pratense HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
VMungo1127G1360 Vigna mungo HOM05D003504 ORTHO05D004006 2.4e-17 92.4 49 95.9
EL10Ac7g17310 Beta vulgaris HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
AUR62022352 Chenopodium quinoa HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Eucgr.K02348 Eucalyptus grandis HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Lalb_Chr01g0007231 Lupinus albus HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 93.9
Lalb_Chr19g0133201 Lupinus albus HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 93.9
PGR044G0024 Punica granatum HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Hund01269 Selenicereus undatus HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
TAR623G0212 Trochodendron aralioides HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Zm00001eb015660 Zea mays HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Zm00001eb395310 Zea mays HOM05D003504 ORTHO05D004006 3.2e-17 92.0 49 95.9
Manes.17G018400 Manihot esculenta HOM05D003504 ORTHO05D004006 4.2e-17 91.7 49 95.9
Potri.011G024000 Populus trichocarpa HOM05D003504 ORTHO05D004006 4.2e-17 91.7 49 95.9
Sabra11G0015000 Salix brachista HOM05D003504 ORTHO05D004006 4.2e-17 91.7 49 95.9
CDE09G0759 Ceratophyllum demersum HOM05D003504 ORTHO05D004006 5.4e-17 91.3 49 95.9
MBI19_g24061_MAGBIO Magnolia biondii HOM05D003504 ORTHO05D004006 5.4e-17 91.3 49 95.9
PSO541G5947 Papaver somniferum HOM05D003504 ORTHO05D004006 5.4e-17 91.3 49 95.9
PSO675G8441 Papaver somniferum HOM05D003504 ORTHO05D004006 5.4e-17 91.3 49 95.9
CAN.G68.16 Capsicum annuum HOM05D003504 ORTHO05D004006 7.1e-17 90.9 49 95.9
SEGI_34400 Sequoiadendron giganteum HOM05D003504 ORTHO05D004006 7.1e-17 90.9 49 93.9
MD05G1229900 Malus domestica HOM05D003504 ORTHO05D004006 9.3e-17 90.5 49 93.9
FvH4_3g14770 Fragaria vesca HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
FAN11G1602 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
FAN16G2874 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
FAN21G0765 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
FAN25G3182 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
MD10G1209700 Malus domestica HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
Prupe.4G132800 Prunus persica HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
RcHm_v2.0_Chr5g0024301 Rosa chinensis HOM05D003504 ORTHO05D004006 1.2e-16 90.1 49 93.9
THA.LOC104823022 Tarenaya hassleriana HOM05D003504 ORTHO05D004006 1.2e-16 90.1 53 86.8
Aa31LG2G12370 Aethionema arabicum HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
AL7G38710 Arabidopsis lyrata HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
AT4G16340 Arabidopsis thaliana HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
BcaC09g50329 Brassica carinata HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
BcaNung00207 Brassica carinata HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
A01p21260 Brassica napus HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
C01p26570 Brassica napus HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
BolC1t02600H Brassica oleracea HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
BraA01t02033Z Brassica rapa HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
Carub.0007s2520 Capsella rubella HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
Thhalv10024194m.g Eutrema salsugineum HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
Sp7g14850 Schrenkiella parvula HOM05D003504 ORTHO05D004006 1.6e-16 89.7 53 86.8
Sc15g0007400 Simmondsia chinensis HOM05D003504 ORTHO05D004006 2.1e-16 89.4 49 93.9
HPP92_006681 Vanilla planifolia HOM05D003504 ORTHO05D004006 2.1e-16 89.4 49 91.8
CARHR222710 Cardamine hirsuta HOM05D003504 ORTHO05D004006 2.7e-16 89.0 53 84.9
Nn1g07188 Nelumbo nucifera HOM05D003504 ORTHO05D004006 7.9e-16 87.4 49 91.8
Peaxi162Scf00280g00008 Petunia axillaris HOM05D003504 ORTHO05D004006 2.3e-15 85.9 47 91.5
unitig_60.g25589 Utricularia gibba HOM05D003504 ORTHO05D004006 3.0e-15 85.5 49 87.8
SMO011G0025 Selaginella moellendorffii HOM05D003504 ORTHO05D004006 8.7e-15 84.0 48 85.4
Nitab4.5_0000348g0160 Nicotiana tabacum HOM05D003504 ORTHO05D004006 1.1e-14 83.6 48 89.6
Mapoly0021s0072 Marchantia polymorpha HOM05D003504 ORTHO05D004006 1.3e-13 80.1 49 83.7
AagrBONN_evm.TU.Sc2ySwM_228.1501 Anthoceros agrestis HOM05D003504 ORTHO05D004006 1.6e-13 79.7 49 81.6
Pp3c3_15370 Physcomitrium patens HOM05D003504 ORTHO05D004006 1.6e-13 79.7 49 77.6
Pp3c10_16640 Physcomitrium patens HOM05D003504 ORTHO05D004006 2.1e-13 79.3 49 75.5
Pp3c1_25190 Physcomitrium patens HOM05D003504 ORTHO05D004006 3.1e-12 75.5 49 75.5
CANSAT80G1492 Cannabis sativa HOM05D003504 ORTHO05D004006 1.2e-11 73.6 49 77.6
Pp3c9_15160 Physcomitrium patens HOM05D003504 ORTHO05D004006 1.5e-11 73.2 49 73.5
Pp3c4_25310 Physcomitrium patens HOM05D003504 ORTHO05D004006 2.0e-11 72.8 49 71.4
CBR_g22314 Chara braunii HOM05D003504 ORTHO05D004006 2.6e-11 72.4 48 72.9
ATR0068G076 Amborella trichopoda HOM05D003504 ORTHO05D004006 9.9e-11 70.5 36 97.2
AagrBONN_evm.TU.Sc2ySwM_344.764 Anthoceros agrestis HOM05D003504 ORTHO05D004006 3.8e-10 68.6 44 77.3
Pp3c15_8680 Physcomitrium patens HOM05D003504 ORTHO05D004006 4.9e-10 68.2 49 71.4
Gohir.A12G174201 Gossypium hirsutum HOM05D003504 ORTHO05D004006 3.3e-06 55.5 27 100.0


User provided reference genes

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