Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 0.0e+00 1259.6 644 100.0
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 8.3e-285 983.4 659 74.8
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 1.6e-280 969.1 659 76.0
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 9.2e-268 926.8 653 71.2
Cfa000204 Carpinus fangiana HOM05D005402 ORTHO05D007036 4.0e-263 911.4 660 70.2
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 7.5e-262 907.1 660 69.8
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 2.5e-257 892.1 659 69.0
GSVIVG01012705001 Vitis vinifera HOM05D005402 ORTHO05D007036 1.1e-255 886.7 659 67.2
Sopen02g011290 Solanum pennellii HOM05D005402 ORTHO05D007036 5.6e-249 864.4 658 64.7
Thecc.06G223300 Theobroma cacao HOM05D005402 ORTHO05D007036 2.1e-248 862.4 659 64.8
Solyc02g032920.3 Solanum lycopersicum HOM05D005402 ORTHO05D007036 3.6e-248 861.7 658 64.6
PGSC0003DMG400022060 Solanum tuberosum HOM05D005402 ORTHO05D007036 3.6e-248 861.7 658 64.4
Duzib235G0987 Durio zibethinus HOM05D005402 ORTHO05D007036 1.4e-247 859.8 658 65.3
Gohir.A05G171400 Gossypium hirsutum HOM05D005402 ORTHO05D007036 1.2e-246 856.7 660 65.9
Gohir.D05G174500 Gossypium hirsutum HOM05D005402 ORTHO05D007036 2.2e-245 852.4 660 65.3
Gorai.009G179800 Gossypium raimondii HOM05D005402 ORTHO05D007036 1.1e-244 850.1 660 65.3
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 1.9e-244 849.4 658 64.4
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 2.4e-244 849.0 656 65.1
Ciclev10014465m.g Citrus clementina HOM05D005402 ORTHO05D007036 3.2e-244 848.6 659 63.4
DCAR_028193 Daucus carota HOM05D000001 ORTHO05D007036 9.2e-244 847.0 682 63.0
Glyma.17G012200 Glycine max HOM05D005402 ORTHO05D007036 1.0e-242 843.6 654 63.6
Migut.M01334 Erythranthe guttata HOM05D005402 ORTHO05D007036 3.9e-242 841.6 650 63.1
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 6.6e-242 840.9 660 65.3
MSTRG.7199 Avicennia marina HOM05D005402 ORTHO05D007036 8.7e-242 840.5 651 63.6
CAN.G128.67 Capsicum annuum HOM05D005402 ORTHO05D007036 4.3e-241 838.2 652 63.8
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 1.1e-239 833.6 659 63.9
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 5.2e-239 831.2 639 65.4
Oeu040335.1 Olea europaea HOM05D005402 ORTHO05D007036 3.4e-238 828.6 652 63.3
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 1.3e-237 826.6 662 64.5
COL.COLO4_31795 Corchorus olitorius HOM05D005402 ORTHO05D007036 1.9e-236 822.8 659 62.4
FAN18G2172 Fragaria x ananassa HOM05D005402 ORTHO05D007036 1.9e-236 822.8 661 62.9
HanXRQChr15g0470411 Helianthus annuus HOM05D005402 ORTHO05D007036 1.9e-236 822.8 659 62.1
Peaxi162Scf00307g01422 Petunia axillaris HOM05D005402 ORTHO05D007036 1.9e-236 822.8 662 63.9
Ca_21074_v3 Cicer arietinum L. HOM05D005402 ORTHO05D007036 4.2e-236 821.6 661 61.4
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 9.3e-236 820.5 658 62.5
Nitab4.5_0004712g0050 Nicotiana tabacum HOM05D005402 ORTHO05D007036 1.2e-235 820.1 628 64.3
arahy.Tifrunner.gnm1.ann1.I0ZCH2 Arachis hypogaea HOM05D005402 ORTHO05D007036 1.6e-235 819.7 658 61.7
FAN08G3587 Fragaria x ananassa HOM05D005402 ORTHO05D007036 1.7e-234 816.2 661 62.6
Atru.chr10.2252 Acer truncatum HOM05D005402 ORTHO05D007036 3.9e-234 815.1 665 61.4
arahy.Tifrunner.gnm1.ann1.T40CTJ Arachis hypogaea HOM05D005402 ORTHO05D007036 5.1e-234 814.7 658 61.6
RcHm_v2.0_Chr7g0223851 Rosa chinensis HOM05D005402 ORTHO05D007036 5.1e-234 814.7 660 62.4
Cc09_g01510 Coffea canephora HOM05D005402 ORTHO05D007036 4.3e-233 811.6 655 61.8
ECA236G3723 Erigeron canadensis HOM05D005402 ORTHO05D000490 4.3e-233 811.6 643 64.1
Medtr4g132340 Medicago truncatula HOM05D005402 ORTHO05D007036 4.3e-233 811.6 657 60.0
Glyma.07G261900 Glycine max HOM05D005402 ORTHO05D007036 7.3e-233 810.8 660 60.8
Lsat_1_v5_gn_7_16460 Lactuca sativa HOM05D005402 ORTHO05D007036 7.3e-233 810.8 657 62.6
VMungo1215G1509 Vigna mungo HOM05D005402 ORTHO05D007036 2.8e-232 808.9 659 61.5
Hund23456 Selenicereus undatus HOM05D005402 ORTHO05D007036 6.2e-232 807.7 655 61.2
CsaV3_6G048920 Cucumis sativus L. HOM05D005402 ORTHO05D007036 2.4e-231 805.8 658 61.7
FAN04G1555 Fragaria x ananassa HOM05D005402 ORTHO05D007036 2.4e-231 805.8 661 62.2
Phvul.003G080200 Phaseolus vulgaris HOM05D005402 ORTHO05D007036 2.4e-231 805.8 658 60.3
TPR.G36999 Trifolium pratense HOM05D005402 ORTHO05D007036 1.2e-230 803.5 658 60.0
FAN13G2175 Fragaria x ananassa HOM05D005402 ORTHO05D007036 1.5e-230 803.1 661 61.7
FvH4_5g29980 Fragaria vesca HOM05D005402 ORTHO05D007036 4.5e-230 801.6 661 62.0
Actinidia11859 Actinidia chinensis HOM05D005402 ORTHO05D007036 1.7e-229 799.7 656 66.2
MELO3C007401.2 Cucumis melo HOM05D005402 ORTHO05D007036 2.2e-229 799.3 658 61.1
Sed0000438 Sechium edule HOM05D005402 ORTHO05D007036 2.2e-229 799.3 658 61.2
SalBow8G4792 Salvia bowleyana HOM05D005402 ORTHO05D007036 1.1e-228 797.0 648 60.8
Potri.007G040000 Populus trichocarpa HOM05D005402 ORTHO05D007036 1.4e-228 796.6 661 60.7
Peaxi162Scf00394g00020 Petunia axillaris HOM05D005402 ORTHO05D007036 1.9e-228 796.2 654 62.4
Eucgr.D01347 Eucalyptus grandis HOM05D005402 ORTHO05D007036 2.3e-226 789.3 660 60.6
PSO541G1465 Papaver somniferum HOM05D005402 ORTHO05D007036 9.6e-225 783.9 660 61.2
Psat4g006080 Pisum sativum HOM05D005402 ORTHO05D007036 9.6e-225 783.9 666 58.6
PGR004G0080 Punica granatum HOM05D005402 ORTHO05D007036 9.6e-225 783.9 657 59.2
PSO675G3880 Papaver somniferum HOM05D005402 ORTHO05D007036 2.8e-224 782.3 660 61.1
CANSAT56G4097 Cannabis sativa HOM05D005402 ORTHO05D007036 1.1e-223 780.4 659 61.3
Sabra07G0036200 Salix brachista HOM05D005402 ORTHO05D007036 1.4e-223 780.0 668 59.7
Lj4g0015196 Lotus japonicus HOM05D005402 ORTHO05D007036 4.9e-221 771.5 658 59.4
Lalb_Chr07g0177141 Lupinus albus HOM05D005402 ORTHO05D007036 4.2e-220 768.5 659 58.9
Aa31LG6G3970 Aethionema arabicum HOM05D005402 ORTHO05D007036 2.3e-218 762.7 652 58.7
Lj2C266G9 Lonicera japonica HOM05D005402 ORTHO05D007036 3.9e-218 761.9 639 63.7
AL7G24400 Arabidopsis lyrata HOM05D005402 ORTHO05D007036 1.6e-216 756.5 658 58.4
MBI02_g15380_MAGBIO Magnolia biondii HOM05D005402 ORTHO05D007036 1.6e-216 756.5 667 58.3
Sp7g26160 Schrenkiella parvula HOM05D005402 ORTHO05D007036 2.8e-216 755.7 658 56.8
Carub.0007s1256 Capsella rubella HOM05D005402 ORTHO05D007036 2.4e-215 752.7 662 57.4
BcaC07g38316 Brassica carinata HOM05D005402 ORTHO05D007036 4.5e-214 748.4 650 57.7
C08p10670 Brassica napus HOM05D005402 ORTHO05D007036 4.5e-214 748.4 650 57.5
THA.LOC104806309 Tarenaya hassleriana HOM05D005402 ORTHO05D007036 5.8e-214 748.0 658 56.5
BolC8t48740H Brassica oleracea HOM05D005402 ORTHO05D007036 2.9e-213 745.7 650 57.5
AUR62015290 Chenopodium quinoa HOM05D005402 ORTHO05D007036 1.6e-211 740.0 648 57.1
A08p20200 Brassica napus HOM05D005402 ORTHO05D007036 2.3e-210 736.1 653 57.1
BraA08t33979Z Brassica rapa HOM05D005402 ORTHO05D007036 2.3e-210 736.1 653 57.1
CARHR235910 Cardamine hirsuta HOM05D005402 ORTHO05D007036 1.1e-209 733.8 655 57.6
Ah.10g032740 Amaranthus hybridus HOM05D005402 ORTHO05D007036 1.5e-209 733.4 654 56.1
TWI63G0339 Tripterygium wilfordii HOM05D005402 ORTHO05D007036 1.7e-205 719.9 654 56.0
Aqoxy1G03121 Aquilegia oxysepala HOM05D005402 ORTHO05D007036 6.5e-205 718.0 659 55.4
AUR62032734 Chenopodium quinoa HOM05D005402 ORTHO05D007036 3.9e-202 708.8 659 55.2
BcaB03g12558 Brassica carinata HOM05D005402 ORTHO05D007036 6.7e-202 708.0 654 55.2
MD15G1066800 Malus domestica HOM05D005402 ORTHO05D007036 2.2e-200 703.0 666 55.3
AT4G28200 Arabidopsis thaliana HOM05D005402 ORTHO05D007036 1.3e-197 693.7 658 54.3
Thhalv10024642m.g Eutrema salsugineum HOM05D005402 ORTHO05D007036 3.8e-197 692.2 653 54.2
Hma1.2p1_0412F.1_g147310 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.4e-196 690.3 492 70.3
unitig_748.g7549 Utricularia gibba HOM05D005402 ORTHO05D007036 8.8e-194 681.0 642 55.1
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 3.3e-193 679.1 510 67.1
MD08G1079900 Malus domestica HOM05D005402 ORTHO05D007036 4.4e-193 678.7 656 54.3
Os02g0103900 Oryza sativa ssp. japonica HOM05D005402 ORTHO05D007036 2.3e-186 656.4 688 50.1
CDE05G1008 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 7.4e-185 651.4 650 52.2
ATR0743G102 Amborella trichopoda HOM05D005402 ORTHO05D007036 2.2e-176 623.2 658 50.8
HPP92_012414 Vanilla planifolia HOM05D005402 ORTHO05D007036 2.3e-170 603.2 659 47.5
Zm00001eb118290 Zea mays HOM05D005402 ORTHO05D007036 1.7e-141 507.3 522 51.1
BcaB03g12559 Brassica carinata HOM05D005402 ORTHO05D007036 3.1e-138 496.5 416 60.6
SGA_v2.0_scaffold7G03813 Striga asiatica HOM05D005402 ORTHO05D007036 8.3e-136 488.4 474 51.1
Sc05g0009280 Simmondsia chinensis HOM05D005402 ORTHO05D007036 1.2e-134 484.6 348 68.4
SGA_v2.0_scaffold4G01907 Striga asiatica HOM05D005402 ORTHO05D007036 1.5e-132 477.6 608 45.9
EL10Ac3g06734 Beta vulgaris HOM05D005402 ORTHO05D007036 4.0e-130 469.5 330 68.2
Mapoly0165s0012 Marchantia polymorpha HOM05D005402 ORTHO05D007036 4.7e-123 446.0 658 38.8
SMO203G0067 Selaginella moellendorffii HOM05D005402 ORTHO05D007036 2.1e-107 394.0 637 35.8
Pp3c5_4450 Physcomitrium patens HOM05D005402 ORTHO05D007036 9.0e-98 362.1 660 34.4
AagrBONN_evm.TU.Sc2ySwM_228.882 Anthoceros agrestis HOM05D005402 ORTHO05D007036 6.3e-91 339.3 464 40.7
SEGI_35740 Sequoiadendron giganteum HOM05D005402 ORTHO05D007036 6.5e-88 329.3 349 47.9
Sc05g0009290 Simmondsia chinensis HOM05D005402 ORTHO05D007036 1.1e-87 328.6 288 55.9
Cpa.g.sc1199.5 Carica papaya HOM05D005402 ORTHO05D007036 2.0e-81 307.8 272 54.4
CBR_g31384 Chara braunii HOM05D005402 ORTHO05D007036 7.4e-68 262.7 743 28.0
EL10Ac3g06733 Beta vulgaris HOM05D005402 ORTHO05D007036 4.1e-66 256.9 360 41.9
CAN.G23.24 Capsicum annuum HOM05D005402 ORTHO05D007036 3.5e-65 253.8 271 48.0
Cre10.g442000 Chlamydomonas reinhardtii HOM05D005402 ORTHO05D007036 5.5e-63 246.5 704 27.4
RcHm_v2.0_Chr7g0223961 Rosa chinensis HOM05D005402 ORTHO05D007036 7.5e-60 236.1 278 46.0
RcHm_v2.0_Chr6g0291751 Rosa chinensis HOM05D005402 ORTHO05D007036 9.8e-44 182.6 226 47.8
RcHm_v2.0_Chr7g0223951 Rosa chinensis HOM05D005402 ORTHO05D007036 1.3e-32 145.6 128 60.2
SHI32968 Sapria himalayana HOM05D005402 ORTHO05D007036 2.3e-32 144.8 226 35.4
RcHm_v2.0_Chr7g0223941 Rosa chinensis HOM05D005402 ORTHO05D007036 6.6e-32 143.3 80 78.8
MCO01G148 Micromonas commoda HOM05D005402 ORTHO05D007036 1.0e-24 119.4 209 34.4
AagrBONN_evm.TU.Sc2ySwM_228.888 Anthoceros agrestis HOM05D005402 ORTHO05D007036 2.5e-23 114.8 101 50.5
SalBow7G0548 Salvia bowleyana HOM05D005402 ORTHO05D037500 1.2e-22 112.5 99 58.6
SalBow5G5666 Salvia bowleyana HOM05D005402 ORTHO05D037500 1.2e-20 105.9 76 68.4
Cfa022130 Carpinus fangiana HOM05D005402 ORTHO05D007036 2.0e-20 105.1 238 32.4
Zm00001eb129750 Zea mays HOM05D005402 ORTHO05D007036 2.6e-20 104.8 246 30.5
AagrBONN_evm.TU.Sc2ySwM_228.894 Anthoceros agrestis HOM05D005402 ORTHO05D007036 5.8e-20 103.6 86 50.0
SalBow1G2367 Salvia bowleyana HOM05D005402 ORTHO05D037500 5.8e-20 103.6 76 67.1
Hma1.2p1_0660F.1_g197590 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 6.4e-19 100.1 64 68.8
AagrBONN_evm.TU.Sc2ySwM_228.885 Anthoceros agrestis HOM05D005402 ORTHO05D007036 9.2e-18 96.3 117 43.6
CARHR228840 Cardamine hirsuta HOM05D005402 ORTHO05D007036 9.2e-18 96.3 62 77.4
Zm00001eb238100 Zea mays HOM05D005402 ORTHO05D007036 1.4e-13 82.4 96 44.8
A01p19620 Brassica napus HOM05D005402 ORTHO05D007036 2.2e-11 75.1 70 52.9
RcHm_v2.0_Chr6g0291761 Rosa chinensis HOM05D005402 ORTHO05D007036 9.3e-10 69.7 77 50.6
Dinv21729 Davidia involucrata HOM05D005402 ORTHO05D007036 3.6e-06 57.8 72 48.6


User provided reference genes

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