Gene: Os02g0103900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0103900
  • Transcript Identifier Os02t0103900-01
  • Gene Type Coding gene
  • Location chr02 : 187798-192041 : negative

Gene Family Information

  • ID HOM05D005402
  • #Genes/#Species 141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0103900-01
  • MSU-ID LOC_Os02g01350.1
  • uniprot Q6YPH2

Descriptions

  • Description U3 small nucleolar RNA-associated protein 6 domain containing protein.
  • Description Hypothetical conserved gene.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0000462
IBA
IEA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462
IEA
InterPromaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IBA
IEA
GOA DatabasesnoRNA binding
GO:0030515
IEA
InterProsnoRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034388
IBA
GOA DatabasePwp2p-containing subcomplex of 90S preribosome
GO:0032040
IBA
GOA Databasesmall-subunit processome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR013949 U3 small nucleolar RNA-associated protein 6
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
17.1.3.2.1.3.6 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (UTP6)