Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.6e-170 602.8 329 100.0
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 2.6e-69 266.5 229 58.1
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.9e-60 236.5 225 55.1
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.4e-57 227.6 235 54.0
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.3e-56 223.0 235 54.5
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 5.7e-56 222.2 227 50.2
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 1.2e-53 214.5 227 48.9
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 4.5e-53 212.6 224 50.0
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 6.5e-52 208.8 242 47.5
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 7.2e-51 205.3 224 48.2
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 1.6e-50 204.1 225 48.9
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 3.6e-50 203.0 227 46.3
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 8.0e-50 201.8 227 47.1
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.0e-49 201.4 208 51.4
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 1.8e-49 200.7 227 46.7
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 2.3e-49 200.3 241 47.3
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.2e-49 199.1 228 46.1
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 6.7e-49 198.7 227 46.3
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 1.5e-48 197.6 224 45.1
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 1.5e-48 197.6 227 46.3
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.6e-48 196.8 227 46.3
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 4.4e-48 196.1 229 45.0
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 5.7e-48 195.7 221 46.2
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 7.5e-48 195.3 243 45.3
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 7.5e-48 195.3 226 46.0
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 9.7e-48 194.9 227 45.8
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 9.7e-48 194.9 226 46.5
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.3e-47 194.5 215 48.8
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 1.3e-47 194.5 226 46.5
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 1.3e-47 194.5 226 46.5
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.3e-47 194.5 227 44.9
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 1.7e-47 194.1 225 44.0
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 2.2e-47 193.7 229 45.9
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 3.7e-47 193.0 227 45.4
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 3.7e-47 193.0 231 42.4
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 6.3e-47 192.2 230 43.5
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 8.2e-47 191.8 224 46.9
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 8.2e-47 191.8 227 45.8
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 1.4e-46 191.0 225 44.0
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 1.8e-46 190.7 229 44.5
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 2.4e-46 190.3 224 47.3
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 2.4e-46 190.3 227 44.1
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 2.4e-46 190.3 227 43.6
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 4.1e-46 189.5 227 45.4
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 9.1e-46 188.3 240 43.3
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 9.1e-46 188.3 225 44.9
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 1.2e-45 188.0 228 44.3
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 1.2e-45 188.0 226 46.0
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.6e-45 187.6 243 44.0
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 2.7e-45 186.8 227 44.5
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 3.5e-45 186.4 227 43.6
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 4.5e-45 186.0 227 44.9
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 4.5e-45 186.0 227 44.1
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 7.7e-45 185.3 224 47.3
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.0e-44 184.9 225 44.9
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 1.0e-44 184.9 223 44.4
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 1.3e-44 184.5 227 44.9
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 1.3e-44 184.5 224 44.2
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 1.7e-44 184.1 227 43.2
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 1.7e-44 184.1 226 44.2
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 2.2e-44 183.7 227 44.5
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.2e-44 183.7 228 44.7
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 2.9e-44 183.3 227 44.1
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 3.8e-44 183.0 228 45.6
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.0e-44 182.6 228 45.6
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.5e-43 181.0 228 44.7
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 1.5e-43 181.0 227 43.6
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 1.5e-43 181.0 225 42.2
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 2.5e-43 180.3 227 42.7
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.2e-43 179.9 224 45.5
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 4.2e-43 179.5 228 42.1
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 4.2e-43 179.5 224 44.6
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 7.2e-43 178.7 224 41.1
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 9.4e-43 178.3 226 44.2
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 1.6e-42 177.6 223 44.4
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 2.7e-42 176.8 226 41.6
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 2.7e-42 176.8 223 42.6
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 6.1e-42 175.6 227 41.9
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.4e-41 174.5 225 42.7
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.8e-41 171.8 225 41.3
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.5e-40 171.0 230 41.7
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 2.0e-40 170.6 228 40.8
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 3.4e-40 169.9 237 40.9
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 5.7e-40 169.1 226 39.4
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 7.5e-40 168.7 194 45.4
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 7.5e-40 168.7 228 42.5
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 1.7e-39 167.5 226 42.5
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 3.7e-39 166.4 229 40.6
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 3.1e-38 163.3 226 41.6
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 7.0e-38 162.2 208 40.4
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 9.1e-38 161.8 228 38.2
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 2.0e-37 160.6 227 37.4
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 4.5e-37 159.5 229 37.6
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 7.7e-37 158.7 230 37.8
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 1.3e-36 157.9 205 42.4
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.7e-36 157.5 228 39.9
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 2.9e-36 156.8 223 37.7
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 2.9e-36 156.8 228 36.4
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 2.9e-36 156.8 340 34.4
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 3.8e-36 156.4 227 37.0
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 3.8e-36 156.4 236 40.7
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 5.0e-36 156.0 224 39.7
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 8.6e-36 155.2 204 40.2
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 1.1e-35 154.8 228 36.8
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 1.1e-35 154.8 223 38.6
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 1.9e-35 154.1 241 38.6
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 2.5e-35 153.7 224 37.9
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 3.3e-35 153.3 227 36.1
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 4.2e-35 152.9 224 36.2
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 7.2e-35 152.1 228 35.5
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 9.5e-35 151.8 224 37.5
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 2.1e-34 150.6 224 37.5
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 2.8e-34 150.2 226 36.7
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 2.8e-34 150.2 230 35.7
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 6.1e-34 149.1 226 36.7
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 1.0e-33 148.3 292 32.9
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 1.4e-33 147.9 226 36.7
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 5.2e-33 146.0 227 35.7
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 5.2e-33 146.0 229 37.1
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.2e-33 146.0 301 33.6
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 6.8e-33 145.6 231 35.1
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 2.0e-32 144.1 235 33.6
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.6e-32 143.7 298 32.9
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 3.4e-32 143.3 217 38.7
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 7.5e-32 142.1 227 34.8
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 1.3e-31 141.4 236 35.2
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 8.3e-31 138.7 234 34.6
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 1.8e-30 137.5 151 52.3
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 9.2e-30 135.2 227 33.9
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 1.2e-29 134.8 227 33.9
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 2.7e-29 133.7 341 29.3
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 3.8e-28 129.8 273 33.0
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 1.9e-27 127.5 170 37.6
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 5.6e-27 125.9 112 50.9
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.0e-25 121.7 217 31.8
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 4.4e-24 116.3 235 32.3
Rhsim01G0258900 Rhododendron simsii HOM05D004427 ORTHO05D005381 1.3e-23 114.8 71 74.6
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 1.4e-22 111.3 176 36.9
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 7.0e-22 109.0 208 32.7
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 7.0e-22 109.0 196 33.2
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 9.2e-22 108.6 198 32.3
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 9.2e-22 108.6 198 32.3
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 1.2e-21 108.2 272 30.1
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 1.6e-21 107.8 143 37.8
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 2.0e-21 107.5 193 34.2
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.1e-19 101.7 171 37.4
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 1.1e-19 101.7 195 39.0
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 1.9e-19 100.9 234 30.8
AUR62008635 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.6e-18 97.8 98 52.0
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 1.4e-17 94.7 136 38.2
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 5.2e-17 92.8 155 38.7
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 1.2e-16 91.7 136 37.5
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 2.0e-16 90.9 251 25.9
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 2.6e-16 90.5 134 38.8
FAN09G1397 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.3e-15 88.2 210 32.4
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 5.4e-14 82.8 149 36.9
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 6.0e-13 79.3 128 38.3
AUR62037167 Chenopodium quinoa HOM05D004427 ORTHO05D005381 5.1e-12 76.3 69 55.1
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 1.1e-11 75.1 129 34.9
AUR62002202 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.5e-11 74.7 164 30.5
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.2e-10 71.6 63 54.0
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.7e-10 69.7 63 54.0
AUR62015500 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.4e-09 68.2 80 45.0
FAN17G0076 Fragaria x ananassa HOM05D028185 ORTHO05D025555 9.2e-06 55.5 81 40.7


User provided reference genes

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