Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14499 Vaccinium macrocarpon HOM05D007197 ORTHO05D009064 5.5e-167 590.9 297 100.0
Rhsim01G0224100 Rhododendron simsii HOM05D007197 ORTHO05D009064 6.0e-73 278.5 281 58.0
CSS0011816 Camellia sinensis var. sinensis HOM05D007197 ORTHO05D009064 9.0e-69 264.6 268 57.5
Actinidia03776 Actinidia chinensis HOM05D007197 ORTHO05D009064 1.3e-67 260.8 269 56.9
Dinv32855 Davidia involucrata HOM05D007197 ORTHO05D009064 1.3e-59 234.2 268 53.0
Hma1.2p1_0846F.1_g227730 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 9.7e-55 218.0 263 49.8
CiPaw.13G100300 Carya illinoinensis HOM05D007197 ORTHO05D009064 8.5e-51 204.9 272 48.5
TAR636G0394 Trochodendron aralioides HOM05D007197 ORTHO05D009064 4.2e-50 202.6 272 48.2
Prupe.6G086100 Prunus persica HOM05D007197 ORTHO05D009064 3.0e-48 196.4 273 45.1
QL01p033595 Quercus lobata HOM05D007197 ORTHO05D009064 1.5e-47 194.1 272 46.3
Nitab4.5_0000610g0220 Nicotiana tabacum HOM05D007197 ORTHO05D009064 3.3e-47 193.0 270 43.7
Cc01_g12210 Coffea canephora HOM05D007197 ORTHO05D009064 4.4e-47 192.6 271 45.0
CAN.G764.13 Capsicum annuum HOM05D007197 ORTHO05D009064 5.7e-47 192.2 268 44.8
HanXRQChr11g0340311 Helianthus annuus HOM05D007197 ORTHO05D009064 5.7e-47 192.2 272 44.5
Oeu017383.1 Olea europaea HOM05D007197 ORTHO05D009064 5.7e-47 192.2 273 44.0
GSVIVG01025047001 Vitis vinifera HOM05D007197 ORTHO05D009064 7.4e-47 191.8 264 47.0
Atru.chr7.1106 Acer truncatum HOM05D007197 ORTHO05D009064 1.3e-46 191.0 276 45.3
ClCG02G020670 Citrullus lanatus HOM05D007197 ORTHO05D009064 2.2e-46 190.3 299 43.8
ECA248G2344 Erigeron canadensis HOM05D007197 ORTHO05D009064 2.2e-46 190.3 274 44.9
Sopen11g030850 Solanum pennellii HOM05D007197 ORTHO05D009064 6.3e-46 188.7 268 42.9
TPR.G1052 Trifolium pratense HOM05D007197 ORTHO05D009064 2.4e-45 186.8 270 42.2
Sed0002926 Sechium edule HOM05D007197 ORTHO05D009064 4.1e-45 186.0 274 44.5
Lsat_1_v5_gn_5_166580 Lactuca sativa HOM05D001223 ORTHO05D001058 7.0e-45 185.3 274 44.2
Solyc11g073220.3 Solanum lycopersicum HOM05D007197 ORTHO05D009064 1.2e-44 184.5 268 42.9
Gorai.009G102000 Gossypium raimondii HOM05D007197 ORTHO05D009064 2.0e-44 183.7 272 44.5
CsaV3_6G022120 Cucumis sativus L. HOM05D007197 ORTHO05D009064 3.5e-44 183.0 291 43.0
arahy.Tifrunner.gnm1.ann1.EBM8RS Arachis hypogaea HOM05D007197 ORTHO05D009064 4.5e-44 182.6 261 45.6
VMungo1127G0131 Vigna mungo HOM05D007197 ORTHO05D009064 5.9e-44 182.2 270 44.1
Medtr4g062540 Medicago truncatula HOM05D007197 ORTHO05D009064 7.7e-44 181.8 270 43.7
Lalb_Chr19g0137651 Lupinus albus HOM05D007197 ORTHO05D009064 1.3e-43 181.0 271 43.9
arahy.Tifrunner.gnm1.ann1.RPJA1V Arachis hypogaea HOM05D007197 ORTHO05D009064 1.7e-43 180.6 261 45.2
Phvul.011G067900 Phaseolus vulgaris HOM05D007197 ORTHO05D009064 2.2e-43 180.3 270 43.3
DCAR_018914 Daucus carota HOM05D007197 ORTHO05D009064 3.8e-43 179.5 269 42.0
RcHm_v2.0_Chr5g0062661 Rosa chinensis HOM05D007197 ORTHO05D009064 5.0e-43 179.1 271 43.5
COL.COLO4_15236 Corchorus olitorius HOM05D007197 ORTHO05D009064 6.5e-43 178.7 277 44.4
FAN11G2804 Fragaria x ananassa HOM05D007197 ORTHO05D009064 6.5e-43 178.7 271 42.4
Eucgr.J02088 Eucalyptus grandis HOM05D007197 ORTHO05D009064 8.5e-43 178.3 274 42.3
MBI14_g30584_MAGBIO Magnolia biondii HOM05D007197 ORTHO05D009064 8.5e-43 178.3 274 42.7
Nitab4.5_0003179g0070 Nicotiana tabacum HOM05D007197 ORTHO05D009064 1.5e-42 177.6 302 38.7
Aqoxy4G03051 Aquilegia oxysepala HOM05D007197 ORTHO05D009064 3.2e-42 176.4 272 42.6
Gohir.A05G098300 Gossypium hirsutum HOM05D007197 ORTHO05D009064 3.2e-42 176.4 272 42.6
Thecc.09G328900 Theobroma cacao HOM05D007197 ORTHO05D009064 3.2e-42 176.4 265 44.5
Migut.N02658 Erythranthe guttata HOM05D007197 ORTHO05D009064 4.2e-42 176.0 261 42.1
MD11G1115100 Malus domestica HOM05D007197 ORTHO05D009064 9.4e-42 174.9 275 41.5
MELO3C013672.2 Cucumis melo HOM05D007197 ORTHO05D009064 1.2e-41 174.5 160 59.4
Nn2g10506 Nelumbo nucifera HOM05D007197 ORTHO05D009064 1.6e-41 174.1 274 44.2
AUR62041290 Chenopodium quinoa HOM05D007197 ORTHO05D009064 2.1e-41 173.7 271 41.7
Lj3g0013433 Lotus japonicus HOM05D007197 ORTHO05D009064 3.6e-41 172.9 270 42.6
Cfa011437 Carpinus fangiana HOM05D007197 ORTHO05D009064 4.7e-41 172.6 265 45.7
Duzib168G0795 Durio zibethinus HOM05D007197 ORTHO05D009064 4.7e-41 172.6 262 44.3
Manes.11G135500 Manihot esculenta HOM05D007197 ORTHO05D009064 4.7e-41 172.6 204 48.5
AUR62034127 Chenopodium quinoa HOM05D007197 ORTHO05D009064 4.0e-40 169.5 271 41.3
Glyma.11G143900 Glycine max HOM05D007197 ORTHO05D009064 4.0e-40 169.5 266 42.9
Haze_24013 Corylus avellana HOM05D007197 ORTHO05D009064 8.8e-40 168.3 313 41.2
FAN21G2562 Fragaria x ananassa HOM05D007197 ORTHO05D009064 1.5e-39 167.5 293 38.6
Haze_24019 Corylus avellana HOM05D007197 ORTHO05D009064 5.7e-39 165.6 308 41.2
TWI79G0955 Tripterygium wilfordii HOM05D007197 ORTHO05D009064 1.7e-38 164.1 266 42.1
Sc12g0001730 Simmondsia chinensis HOM05D007197 ORTHO05D009064 2.2e-38 163.7 272 38.6
EL10Ac7g15954 Beta vulgaris HOM05D007197 ORTHO05D009064 6.3e-38 162.2 276 40.2
PSO206G0023 Papaver somniferum HOM05D007197 ORTHO05D009064 8.3e-38 161.8 268 42.5
ATR0033G040 Amborella trichopoda HOM05D007197 ORTHO05D009064 1.8e-37 160.6 275 40.0
AT1G07745 Arabidopsis thaliana HOM05D007197 ORTHO05D009064 7.0e-37 158.7 271 39.9
BcaB03g13374 Brassica carinata HOM05D007197 ORTHO05D009064 1.2e-36 157.9 273 39.6
Os09g0104200 Oryza sativa ssp. japonica HOM05D007197 ORTHO05D009064 1.6e-36 157.5 275 38.9
Zm00001eb329200 Zea mays HOM05D007197 ORTHO05D009064 2.0e-36 157.1 166 50.0
AL1G17970 Arabidopsis lyrata HOM05D007197 ORTHO05D009064 5.9e-36 155.6 272 38.6
Sp1g06430 Schrenkiella parvula HOM05D007197 ORTHO05D009064 1.0e-35 154.8 273 39.2
A08p35470 Brassica napus HOM05D007197 ORTHO05D009064 1.3e-35 154.5 273 39.2
BraA08t35453Z Brassica rapa HOM05D007197 ORTHO05D009064 1.3e-35 154.5 273 39.2
Peaxi162Scf00406g00019 Petunia axillaris HOM05D007197 ORTHO05D009064 2.2e-35 153.7 257 38.9
THA.LOC104800640 Tarenaya hassleriana HOM05D007197 ORTHO05D009064 3.8e-35 152.9 271 38.7
Carub.0001s0710 Capsella rubella HOM05D007197 ORTHO05D009064 8.5e-35 151.8 274 39.1
Ca_19199_v3 Cicer arietinum L. HOM05D007197 ORTHO05D009064 8.5e-35 151.8 239 43.5
SHI05980 Sapria himalayana HOM05D000723 ORTHO05D001626 1.5e-34 151.0 166 51.2
BolC8t47130H Brassica oleracea HOM05D007197 ORTHO05D009064 1.8e-32 144.1 273 37.4
C08p03340 Brassica napus HOM05D007197 ORTHO05D009064 4.0e-32 142.9 267 37.8
Prupe.6G066800 Prunus persica HOM05D007197 ORTHO05D009064 7.5e-31 138.7 228 42.5
Thhalv10008243m.g Eutrema salsugineum HOM05D007197 ORTHO05D009064 3.5e-28 129.8 248 37.9
HPP92_017953 Vanilla planifolia HOM05D007197 ORTHO05D009064 1.5e-26 124.4 140 48.6
Pp3c23_10930 Physcomitrium patens HOM05D007197 ORTHO05D009064 1.2e-25 121.3 152 45.4
COL.COLO4_29025 Corchorus olitorius HOM05D007197 ORTHO05D009064 3.6e-25 119.8 84 71.4
AagrBONN_evm.TU.Sc2ySwM_228.390 Anthoceros agrestis HOM05D007197 ORTHO05D009064 1.4e-24 117.9 273 30.0
Ah.08g214900 Amaranthus hybridus HOM05D007197 ORTHO05D009064 3.0e-24 116.7 113 56.6
SGA_v2.0_scaffold257G45723 Striga asiatica HOM05D007197 ORTHO05D009064 1.2e-23 114.8 218 39.4
Mapoly0014s0028 Marchantia polymorpha HOM05D007197 ORTHO05D009064 1.5e-23 114.4 155 41.3
Hma1.2p1_0846F.1_g227720 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 4.1e-21 106.3 167 41.9
Hma1.2p1_0056F.1_g031656 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 2.7e-20 103.6 166 42.2
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 7.8e-20 102.1 277 31.4
SMO358G0138 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 1.3e-19 101.3 160 36.9
Hund18943 Selenicereus undatus HOM05D007197 ORTHO05D009064 2.5e-18 97.1 215 39.1
PSO339G6612 Papaver somniferum HOM05D007197 ORTHO05D009064 6.1e-17 92.4 213 38.0
MCO16G347 Micromonas commoda HOM05D007197 ORTHO05D009064 1.0e-16 91.7 261 32.2
Nn2g16043 Nelumbo nucifera HOM05D007197 ORTHO05D009064 2.0e-15 87.4 210 37.6
FvH4_3g34810 Fragaria vesca HOM05D007197 ORTHO05D009064 4.4e-15 86.3 165 37.6
SEGI_26959 Sequoiadendron giganteum HOM05D007197 ORTHO05D009064 4.9e-14 82.8 78 50.0
Hma1.2p1_3525F.1_g336560 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 4.1e-13 79.7 46 73.9
SMO142G0018 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 3.9e-11 73.2 150 31.3
Gohir.D05G098400 Gossypium hirsutum HOM05D007197 ORTHO05D009064 6.6e-11 72.4 166 34.9
Nn2g16045 Nelumbo nucifera HOM05D007197 ORTHO05D009064 2.5e-10 70.5 168 37.5
Cre03.g184651 Chlamydomonas reinhardtii HOM05D007197 ORTHO05D009064 5.6e-10 69.3 308 26.0
unitig_0.g1024 Utricularia gibba HOM05D007197 ORTHO05D009064 7.3e-10 68.9 49 61.2
Actinidia20464 Actinidia chinensis HOM05D007197 ORTHO05D009064 1.2e-09 68.2 38 86.8
CARHR007550 Cardamine hirsuta HOM05D007197 ORTHO05D009064 8.0e-09 65.5 170 31.8
PRCOL_00004125 Prasinoderma coloniale HOM05D007197 ORTHO05D009064 1.5e-07 61.2 253 25.3
HPP92_018064 Vanilla planifolia HOM05D007197 ORTHO05D009064 4.9e-06 56.2 113 32.7


User provided reference genes

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