Gene: Solyc11g073220.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g073220.3
  • Transcript Identifier Solyc11g073220.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 54316880-54322197 : positive

Gene Family Information

  • ID HOM05D007197
  • #Genes/#Species 110/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g073220.3.1
  • uniprot A0A3Q7J286
  • gene_id Solyc11g073220

Descriptions

  • Description DNA repair protein RAD51-like protein 4 (AHRD V3.3 *** A0A2G2V833_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0042148
IBA
GOA Databasestrand invasion
GO:0007131
IBA
GOA Databasereciprocal meiotic recombination
GO:0000723
IBA
GOA Databasetelomere maintenance
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0016444
ISO
PLAZA Integrative Orthologysomatic cell DNA recombination AT1G07745
GO:1900426
ISO
PLAZA Integrative Orthologypositive regulation of defense response to bacterium AT1G07745

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0008094
IBA
IEA
GOA DatabaseATPase, acting on DNA
GO:0005524
IEA
GOA DatabaseATP binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0000400
IBA
GOA Databasefour-way junction DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033063
IBA
GOA DatabaseRad51B-Rad51C-Rad51D-XRCC2 complex
GO:0005657
IBA
GOA Databasereplication fork

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
Mapman id Description
14.3.8.2 DNA damage response.homologous recombination repair (HR).single-strand annealing (SSA) pathway.protein factor (RAD51D)