Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 7.5e-186 653.7 322 100.0
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 9.6e-157 557.0 323 87.9
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 6.0e-135 484.6 319 77.1
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 1.8e-134 483.0 322 76.1
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 2.5e-133 479.2 318 76.4
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.2e-127 460.3 317 73.2
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 6.0e-127 458.0 319 73.4
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.5e-125 453.4 324 71.9
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.5e-125 452.6 317 71.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.3e-124 450.3 322 70.2
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 1.3e-124 450.3 324 68.8
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 2.8e-124 449.1 323 71.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 2.8e-124 449.1 317 70.3
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 1.1e-123 447.2 319 69.0
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 5.3e-123 444.9 312 72.4
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 4.5e-122 441.8 318 69.2
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.0e-121 438.3 313 70.0
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 4.2e-120 435.3 324 67.6
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.5e-120 434.9 324 68.5
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 9.3e-120 434.1 317 68.8
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 2.7e-119 432.6 307 70.7
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 4.6e-119 431.8 312 68.3
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 4.6e-119 431.8 316 68.0
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.0e-118 430.6 314 67.5
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.3e-118 430.3 316 67.1
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.3e-118 429.5 327 67.0
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 2.3e-118 429.5 320 68.1
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 2.5e-117 426.0 321 67.0
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 2.5e-117 426.0 317 65.6
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.3e-117 425.6 311 68.5
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 5.7e-117 424.9 312 67.3
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 5.7e-117 424.9 322 67.1
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 9.7e-117 424.1 307 67.8
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.3e-116 423.7 319 65.5
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.6e-116 423.3 316 66.8
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.6e-116 423.3 311 68.2
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.2e-116 422.9 320 66.9
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 2.2e-116 422.9 323 64.7
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 2.8e-116 422.5 321 67.0
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 3.7e-116 422.2 317 66.2
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 3.7e-116 422.2 320 67.2
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 4.8e-116 421.8 317 65.0
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 8.2e-116 421.0 323 65.9
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 8.2e-116 421.0 320 66.9
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.1e-115 420.6 317 65.0
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.4e-115 420.2 327 67.6
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 1.4e-115 420.2 315 67.9
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 1.4e-115 420.2 321 66.7
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.8e-115 419.9 321 66.0
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 1.8e-115 419.9 319 66.5
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 3.1e-115 419.1 325 64.9
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 5.3e-115 418.3 315 65.1
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.2e-114 417.2 319 66.5
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.5e-114 416.8 319 66.5
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.5e-114 416.8 317 65.9
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.5e-114 416.8 312 67.9
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 2.0e-114 416.4 321 66.0
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 4.5e-114 415.2 319 65.5
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 5.9e-114 414.8 310 67.1
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 5.9e-114 414.8 312 66.7
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 5.9e-114 414.8 317 67.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 7.7e-114 414.5 317 66.2
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 2.2e-113 412.9 317 64.7
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 8.5e-113 411.0 319 63.6
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 1.4e-112 410.2 311 66.6
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 9.4e-112 407.5 312 65.7
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.1e-111 406.4 318 64.2
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.1e-111 404.8 318 63.8
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-109 400.6 325 64.3
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 2.0e-109 399.8 317 64.7
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 3.3e-109 399.1 320 64.1
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 9.7e-109 397.5 310 63.5
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 2.2e-108 396.4 312 63.8
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 2.4e-107 392.9 318 62.9
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.1e-107 392.5 314 63.7
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 4.5e-106 388.7 311 63.7
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 3.8e-105 385.6 313 62.6
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 8.8e-102 374.4 309 59.9
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 1.8e-99 366.7 322 60.9
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.6e-98 362.8 308 63.0
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 1.0e-97 360.9 311 56.6
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.3e-97 360.5 325 56.6
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 2.2e-97 359.8 317 57.7
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 6.1e-95 351.7 273 64.5
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-90 337.4 317 59.0
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 2.7e-90 336.3 257 66.5
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 9.4e-88 327.8 239 66.9
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.3e-84 315.1 317 55.5
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 4.5e-82 308.9 291 55.7
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 6.5e-81 305.1 256 62.5
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 8.5e-81 304.7 254 63.0
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 6.8e-78 295.0 411 41.1
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 5.9e-74 282.0 220 69.1
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.3e-73 280.0 270 54.8
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.2e-69 267.7 205 64.4
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.4e-69 266.2 252 58.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.3e-68 261.5 324 47.5
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.9e-65 252.7 310 45.8
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.3e-64 248.4 213 59.2
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.2e-59 233.0 177 61.6
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 4.1e-59 232.6 197 66.0
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.0e-57 226.5 271 49.4
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.6e-57 224.9 322 42.9
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 3.6e-55 219.5 170 65.9
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 1.4e-54 217.6 169 66.3
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 3.4e-53 213.0 147 70.1
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 5.8e-53 212.2 169 63.3
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 4.1e-51 206.1 166 61.4
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 9.2e-51 204.9 157 63.7
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-46 191.4 148 62.8
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-46 191.4 148 62.8
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-46 191.4 148 62.8
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.4e-45 186.4 103 79.6
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 8.4e-44 181.8 134 63.4
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.9e-41 172.9 166 58.4
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 2.5e-40 170.2 123 73.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.3e-33 147.1 136 53.7
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 4.5e-29 132.9 106 67.0
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.9e-22 109.0 105 59.0
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.9e-21 105.1 117 49.6
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.9e-20 103.6 117 48.7
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.9e-20 103.6 117 48.7
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 3.8e-20 103.2 202 36.1
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 7.1e-19 99.0 118 48.3
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.1e-17 92.8 102 52.0
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 5.3e-14 82.8 80 53.8
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 6.9e-14 82.4 155 33.5
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 3.0e-09 67.0 67 50.7
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 1.5e-08 64.7 67 49.3


User provided reference genes

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