Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13880 Vaccinium macrocarpon HOM05D063747 ORTHO05D006854 9.7e-309 1062.8 584 100.0
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 2.0e-67 261.2 367 47.1
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 4.6e-24 117.1 338 31.7
vmacro14895 Vaccinium macrocarpon HOM05D063747 ORTHO05D426615 7.3e-22 109.8 64 82.8
Actinidia32115 Actinidia chinensis HOM05D000428 ORTHO05D000582 5.3e-12 77.0 91 48.4
Dinv30422 Davidia involucrata HOM05D000428 ORTHO05D000582 6.9e-12 76.6 90 47.8
Oeu049962.1 Olea europaea HOM05D000428 ORTHO05D000582 1.2e-11 75.9 90 45.6
Rhsim08G0228900 Rhododendron simsii HOM05D000428 ORTHO05D000582 2.0e-11 75.1 90 46.7
Actinidia21726 Actinidia chinensis HOM05D000428 ORTHO05D000582 5.8e-11 73.6 83 50.6
CSS0044217 Camellia sinensis var. sinensis HOM05D000428 ORTHO05D000582 7.6e-11 73.2 90 46.7
CSS0046140 Camellia sinensis var. sinensis HOM05D000428 ORTHO05D000582 7.6e-11 73.2 90 46.7
vmacro18839 Vaccinium macrocarpon HOM05D000428 ORTHO05D000582 9.9e-11 72.8 90 45.6
GSVIVG01016951001 Vitis vinifera HOM05D000428 ORTHO05D000582 1.7e-10 72.0 88 44.3
EL10Ac9g21178 Beta vulgaris HOM05D000428 ORTHO05D000582 6.4e-10 70.1 81 46.9
Hma1.2p1_0430F.1_g151210 Hydrangea macrophylla HOM05D000428 ORTHO05D000582 6.4e-10 70.1 90 45.6
Cpa.g.sc25.32 Carica papaya HOM05D000428 ORTHO05D000582 8.4e-10 69.7 96 39.6
Thecc.06G102400 Theobroma cacao HOM05D000428 ORTHO05D000582 8.4e-10 69.7 125 35.2
Manes.04G135800 Manihot esculenta HOM05D000428 ORTHO05D000582 4.2e-09 67.4 88 43.2
Eucgr.F03089 Eucalyptus grandis HOM05D000428 ORTHO05D000582 5.4e-09 67.0 96 37.5
TAR624G0720 Trochodendron aralioides HOM05D000428 ORTHO05D000582 7.1e-09 66.6 90 42.2
COL.COLO4_30537 Corchorus olitorius HOM05D000428 ORTHO05D004798 9.3e-09 66.2 88 42.0
Rhsim01G0083200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-08 65.5 84 41.7
Manes.11G031300 Manihot esculenta HOM05D000428 ORTHO05D000582 2.7e-08 64.7 90 41.1
Duzib235G0459 Durio zibethinus HOM05D000428 ORTHO05D000582 3.5e-08 64.3 88 40.9
Lalb_Chr19g0129981 Lupinus albus HOM05D000428 ORTHO05D000582 3.5e-08 64.3 86 37.2
MD09G1199800 Malus domestica HOM05D000428 ORTHO05D000582 3.5e-08 64.3 98 37.8
Ah.08g211200 Amaranthus hybridus HOM05D000428 ORTHO05D000582 4.6e-08 63.9 111 37.8
CDE09G0107 Ceratophyllum demersum HOM05D000428 ORTHO05D000582 4.6e-08 63.9 97 35.1
Gorai.011G070100 Gossypium raimondii HOM05D000428 ORTHO05D000582 4.6e-08 63.9 127 34.6
MD17G1180400 Malus domestica HOM05D000428 ORTHO05D000582 4.6e-08 63.9 100 36.0
PGR102G2370 Punica granatum HOM05D000428 ORTHO05D000582 4.6e-08 63.9 83 42.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 7.9e-08 63.2 378 25.4
Gohir.D10G066100 Gossypium hirsutum HOM05D000428 ORTHO05D000582 1.0e-07 62.8 127 33.9
Gohir.A10G064600 Gossypium hirsutum HOM05D000428 ORTHO05D000582 1.3e-07 62.4 127 33.1
Nn8g39004 Nelumbo nucifera HOM05D000428 ORTHO05D000582 1.7e-07 62.0 90 42.2
Prupe.3G056300 Prunus persica HOM05D000428 ORTHO05D000582 2.3e-07 61.6 90 38.9
Migut.C00155 Erythranthe guttata HOM05D000428 ORTHO05D000582 3.0e-07 61.2 88 37.5
Potri.005G198500 Populus trichocarpa HOM05D000428 ORTHO05D000582 3.9e-07 60.8 86 34.9
Rhsim01G0051500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.9e-07 60.8 68 45.6
Sabra04G0148900 Salix brachista HOM05D000428 ORTHO05D000582 5.1e-07 60.5 130 30.8
TAR633G2340 Trochodendron aralioides HOM05D000428 ORTHO05D000582 5.1e-07 60.5 92 34.8
vmacro01504 Vaccinium macrocarpon HOM05D000428 ORTHO05D000582 5.1e-07 60.5 86 34.9
Atru.chr3.3429 Acer truncatum HOM05D000428 ORTHO05D000582 8.7e-07 59.7 103 33.0
Lsat_1_v5_gn_1_36661 Lactuca sativa HOM05D000428 ORTHO05D000582 8.7e-07 59.7 80 38.8
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 8.7e-07 59.7 65 44.6
AT3G16380 Arabidopsis thaliana HOM05D000428 ORTHO05D000582 1.1e-06 59.3 130 28.5
MD12G1102400 Malus domestica HOM05D000428 ORTHO05D000582 1.1e-06 59.3 93 36.6
AL1G36300 Arabidopsis lyrata HOM05D000428 ORTHO05D000582 1.5e-06 58.9 81 37.0
AT1G22760 Arabidopsis thaliana HOM05D000428 ORTHO05D000582 1.5e-06 58.9 81 37.0
CiPaw.15G011500 Carya illinoinensis HOM05D000428 ORTHO05D000582 1.5e-06 58.9 86 33.7
Nitab4.5_0006709g0050 Nicotiana tabacum HOM05D000428 ORTHO05D000582 1.5e-06 58.9 93 30.1
Potri.001G191500 Populus trichocarpa HOM05D000428 ORTHO05D000582 1.5e-06 58.9 82 42.7
SalBow2G0533 Salvia bowleyana HOM05D000428 ORTHO05D000582 1.5e-06 58.9 89 40.4
Sp5g26790 Schrenkiella parvula HOM05D000428 ORTHO05D000582 1.5e-06 58.9 81 37.0
SpUn0095_0020 Schrenkiella parvula HOM05D000428 ORTHO05D000582 1.5e-06 58.9 81 37.0
Aqoxy6G00439 Aquilegia oxysepala HOM05D000428 ORTHO05D000582 1.9e-06 58.5 81 35.8
Oeu026721.2 Olea europaea HOM05D000428 ORTHO05D000582 1.9e-06 58.5 75 42.7
QL02p036527 Quercus lobata HOM05D000428 ORTHO05D000582 1.9e-06 58.5 86 33.7
QL02p037048 Quercus lobata HOM05D000428 ORTHO05D000582 1.9e-06 58.5 86 33.7
vmacro07352 Vaccinium macrocarpon HOM05D000428 ORTHO05D000582 1.9e-06 58.5 133 27.8
AT1G71770 Arabidopsis thaliana HOM05D000428 ORTHO05D000582 2.5e-06 58.2 81 37.0
CDE02G4710 Ceratophyllum demersum HOM05D000428 ORTHO05D000582 2.5e-06 58.2 93 32.3
Lalb_Chr03g0035711 Lupinus albus HOM05D000428 ORTHO05D000582 2.5e-06 58.2 86 33.7
QL02p056192 Quercus lobata HOM05D000428 ORTHO05D000582 2.5e-06 58.2 98 34.7
QL05p018767 Quercus lobata HOM05D000428 ORTHO05D000582 2.5e-06 58.2 98 34.7
AL2G31340 Arabidopsis lyrata HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 37.0
Carub.0001s2227 Capsella rubella HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 35.8
CARHR023120 Cardamine hirsuta HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 35.8
Cfa018263 Carpinus fangiana HOM05D000428 ORTHO05D000582 3.3e-06 57.8 86 33.7
CsaV3_6G004880 Cucumis sativus L. HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 35.8
Thhalv10018219m.g Eutrema salsugineum HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 35.8
Sp1g20270 Schrenkiella parvula HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 37.0
Zm00001eb386170 Zea mays HOM05D000428 ORTHO05D000582 3.3e-06 57.8 81 35.8
arahy.Tifrunner.gnm1.ann1.684WH3 Arachis hypogaea HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 33.0
arahy.Tifrunner.gnm1.ann1.PX9GP5 Arachis hypogaea HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 33.0
Glyma.20G171200 Glycine max HOM05D000428 ORTHO05D000582 4.3e-06 57.4 119 29.4
Lj5g0020239 Lotus japonicus HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 31.8
Medtr6g040070 Medicago truncatula HOM05D000428 ORTHO05D000582 4.3e-06 57.4 86 36.0
PSO063G4038 Papaver somniferum HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 34.1
PSO339G4509 Papaver somniferum HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 34.1
Rhsim11G0088700 Rhododendron simsii HOM05D000428 ORTHO05D000582 4.3e-06 57.4 86 33.7
vmacro22533 Vaccinium macrocarpon HOM05D000428 ORTHO05D000582 4.3e-06 57.4 86 32.6
vmacro22648 Vaccinium macrocarpon HOM05D000428 ORTHO05D000582 4.3e-06 57.4 86 32.6
Zm00001eb078040 Zea mays HOM05D000428 ORTHO05D000582 4.3e-06 57.4 88 33.0
BcaB03g15616 Brassica carinata HOM05D000428 ORTHO05D000582 5.6e-06 57.0 81 34.6
BolC6t38644H Brassica oleracea HOM05D000428 ORTHO05D000582 5.6e-06 57.0 81 35.8
MBI04_g13682_MAGBIO Magnolia biondii HOM05D000428 ORTHO05D000582 5.6e-06 57.0 93 30.1
Sabra01G0150100 Salix brachista HOM05D000428 ORTHO05D000582 5.6e-06 57.0 83 39.8
PGSC0003DMG400025074 Solanum tuberosum HOM05D000428 ORTHO05D000582 5.6e-06 57.0 135 27.4
unitig_0.g676 Utricularia gibba HOM05D000428 ORTHO05D000582 5.6e-06 57.0 74 39.2
VMungo0464G0774 Vigna mungo HOM05D000428 ORTHO05D000582 5.6e-06 57.0 86 32.6
Zm00001eb095540 Zea mays HOM05D000428 ORTHO05D000582 5.6e-06 57.0 88 31.8
Ah.05g168240 Amaranthus hybridus HOM05D000428 ORTHO05D000582 7.4e-06 56.6 89 34.8
arahy.Tifrunner.gnm1.ann1.KR97Y0 Arachis hypogaea HOM05D000428 ORTHO05D000582 7.4e-06 56.6 93 31.2
arahy.Tifrunner.gnm1.ann1.TXX6G9 Arachis hypogaea HOM05D000428 ORTHO05D000582 7.4e-06 56.6 93 31.2
Carub.0003s1613 Capsella rubella HOM05D000428 ORTHO05D000582 7.4e-06 56.6 93 35.5
DCAR_007593 Daucus carota HOM05D000428 ORTHO05D000582 7.4e-06 56.6 90 36.7
HanXRQChr02g0032061 Helianthus annuus HOM05D000428 ORTHO05D000582 7.4e-06 56.6 77 39.0
MBI14_g45619_MAGBIO Magnolia biondii HOM05D000428 ORTHO05D011602 7.4e-06 56.6 81 32.1
Nn5g28870 Nelumbo nucifera HOM05D000428 ORTHO05D000582 7.4e-06 56.6 86 31.4
Nn6g35117 Nelumbo nucifera HOM05D000428 ORTHO05D000582 7.4e-06 56.6 93 33.3
PSO170G0575 Papaver somniferum HOM05D000428 ORTHO05D000582 7.4e-06 56.6 88 33.0
PSO210G4416 Papaver somniferum HOM05D000428 ORTHO05D000582 7.4e-06 56.6 88 33.0
PSO541G3509 Papaver somniferum HOM05D000428 ORTHO05D000582 7.4e-06 56.6 87 35.6
PSO675G6601 Papaver somniferum HOM05D000428 ORTHO05D000582 7.4e-06 56.6 87 35.6
Rhsim03G0085400 Rhododendron simsii HOM05D000428 ORTHO05D000582 7.4e-06 56.6 93 33.3
THA.LOC104800094 Tarenaya hassleriana HOM05D000428 ORTHO05D000582 7.4e-06 56.6 81 34.6
HPP92_014154 Vanilla planifolia HOM05D000428 ORTHO05D000582 7.4e-06 56.6 88 35.2
MSTRG.26664 Avicennia marina HOM05D000428 ORTHO05D000582 9.6e-06 56.2 93 34.4
BcaC03g15299 Brassica carinata HOM05D000428 ORTHO05D000582 9.6e-06 56.2 86 33.7
C02p29100 Brassica napus HOM05D000428 ORTHO05D000582 9.6e-06 56.2 86 33.7
BolC2t08957H Brassica oleracea HOM05D000428 ORTHO05D000582 9.6e-06 56.2 86 33.7
BolC6t39634H Brassica oleracea HOM05D000428 ORTHO05D000582 9.6e-06 56.2 81 35.8
CAN.G766.1 Capsicum annuum HOM05D000428 ORTHO05D000582 9.6e-06 56.2 93 34.4
Cc04_g02410 Coffea canephora HOM05D000428 ORTHO05D000582 9.6e-06 56.2 82 39.0
Lalb_Chr06g0161831 Lupinus albus HOM05D000428 ORTHO05D000582 9.6e-06 56.2 88 31.8
MD14G1096300 Malus domestica HOM05D000428 ORTHO05D000582 9.6e-06 56.2 84 36.9
Nitab4.5_0001979g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 9.6e-06 56.2 93 31.2
Os09g0115400 Oryza sativa ssp. japonica HOM05D000428 ORTHO05D000582 9.6e-06 56.2 88 33.0


User provided reference genes

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