Gene: AT3G16380

General Information

Computational description poly(A) binding protein 6 (PAB6); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 47895 Blast hits to 20906 proteins in 826 species: Archae - 26; Bacteria - 3385; Metazoa - 25529; Fungi - 5704; Plants - 8252; Viruses - 0; Other Eukaryotes - 4999 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006413	TAS	Gene Ontology	translational initiation	1
GO:0016071	TAS	Gene Ontology	mRNA metabolic process	1
GO:0006417	IEA	GOA Database	regulation of translation

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003743	ISS	Gene Ontology	translation initiation factor activity
GO:0003723	IEA	GOA Database	RNA binding
GO:0003723	IBA	Gene Ontology	RNA binding	2
GO:0008266	IBA	Gene Ontology	poly(U) RNA binding	2
GO:0008143	IBA	Gene Ontology	poly(A) binding	2
GO:0003730	IBA	Gene Ontology	mRNA 3'-UTR binding	2
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus
GO:0005634	IBA	Gene Ontology	nucleus	2
GO:0005829	IBA	Gene Ontology	cytosol	2
GO:1990904	IBA	Gene Ontology	ribonucleoprotein complex	2
GO:0005737	IEA	GOA Database	cytoplasm

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily

Mapman id	Description
17.4.2.5	Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP)