Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 4.2e-128 461.5 247 100.0
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.3e-97 360.1 249 79.5
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 6.8e-94 347.8 248 77.4
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 6.3e-92 341.3 249 76.7
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 3.5e-90 335.5 248 73.4
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 2.9e-89 332.4 246 73.2
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 3.4e-85 318.9 247 70.9
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 3.4e-85 318.9 251 70.5
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 2.8e-84 315.8 247 69.2
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 1.8e-83 313.2 255 69.4
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.8e-83 313.2 239 71.5
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.2e-82 310.5 254 69.3
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.2e-82 310.5 239 70.7
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 2.0e-82 309.7 238 71.4
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 2.0e-82 309.7 244 68.4
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 3.5e-82 308.9 247 69.2
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 3.5e-82 308.9 235 73.2
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 5.9e-82 308.1 236 71.6
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.0e-81 305.1 253 69.2
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 5.0e-81 305.1 254 66.5
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 5.0e-81 305.1 251 69.7
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 8.6e-81 304.3 253 69.2
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 1.1e-80 303.9 247 69.2
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-80 302.0 246 67.9
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-80 302.0 253 68.4
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 4.2e-80 302.0 252 68.7
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 5.5e-80 301.6 248 67.3
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 9.5e-80 300.8 247 68.4
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 1.6e-79 300.1 254 66.5
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.1e-79 299.7 241 68.9
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.8e-79 299.3 241 68.9
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 3.6e-79 298.9 235 70.6
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 3.6e-79 298.9 255 65.9
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 8.0e-79 297.7 251 67.3
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 1.4e-78 297.0 251 67.3
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.8e-78 296.6 254 67.7
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 2.3e-78 296.2 250 68.8
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 3.0e-78 295.8 238 69.3
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 3.0e-78 295.8 231 70.1
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 2.0e-77 293.1 246 64.6
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 1.7e-76 290.0 250 66.4
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 3.7e-76 288.9 245 66.1
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 4.9e-76 288.5 244 66.4
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 6.3e-76 288.1 238 66.8
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 4.1e-75 285.4 254 65.0
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 4.1e-75 285.4 239 65.7
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 5.4e-75 285.0 254 64.6
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 7.0e-75 284.6 246 66.7
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 7.0e-75 284.6 249 63.9
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.6e-74 283.5 249 63.5
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 5.9e-74 281.6 251 64.9
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 7.8e-74 281.2 252 65.9
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 7.8e-74 281.2 231 66.2
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 1.0e-73 280.8 252 63.5
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 1.0e-73 280.8 248 64.1
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 2.3e-73 279.6 228 67.1
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 2.3e-73 279.6 250 63.6
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 3.9e-73 278.9 253 64.4
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 3.9e-73 278.9 249 63.5
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 6.6e-73 278.1 249 63.1
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 6.6e-73 278.1 239 66.1
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 8.6e-73 277.7 247 63.2
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 1.9e-72 276.6 247 62.8
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 2.5e-72 276.2 247 62.8
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 2.5e-72 276.2 251 64.1
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 4.3e-72 275.4 233 65.7
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 7.3e-72 274.6 248 62.1
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 1.6e-71 273.5 242 64.0
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 2.1e-71 273.1 233 65.2
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.4e-70 270.4 247 63.6
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.3e-70 269.6 247 63.2
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 6.8e-70 268.1 231 64.1
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 6.8e-70 268.1 250 62.0
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 3.4e-69 265.8 251 61.0
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.3e-68 263.8 222 66.2
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.7e-68 263.5 252 61.9
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 2.2e-68 263.1 253 61.7
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.4e-67 259.6 248 61.7
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 3.2e-67 259.2 234 65.4
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 7.0e-67 258.1 250 61.2
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.2e-66 257.3 250 58.8
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 1.2e-66 257.3 244 59.4
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 2.0e-66 256.5 247 59.5
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 6.0e-66 255.0 251 59.8
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 6.0e-66 255.0 251 59.8
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 6.0e-66 255.0 233 63.9
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 1.7e-65 253.4 248 58.9
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.3e-65 253.1 257 57.6
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 8.6e-65 251.1 241 59.3
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 1.1e-64 250.8 258 57.8
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 1.5e-64 250.4 238 61.8
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 5.6e-64 248.4 254 56.7
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 2.1e-63 246.5 256 55.9
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 2.8e-63 246.1 251 55.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 2.8e-63 246.1 251 55.8
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 4.7e-63 245.4 257 56.0
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 4.7e-63 245.4 249 57.4
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.7e-63 245.4 257 55.3
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.4e-62 243.8 253 56.5
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 4.0e-62 242.3 257 55.6
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 7.5e-61 238.0 257 54.5
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 9.8e-61 237.7 177 70.6
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.1e-59 234.2 216 62.0
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.4e-59 233.0 237 56.1
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 7.3e-56 221.5 258 52.7
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 7.3e-56 221.5 252 54.0
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 6.2e-55 218.4 251 51.8
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.4e-54 217.2 252 51.6
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 2.3e-54 216.5 251 51.4
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 2.3e-54 216.5 251 51.4
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 4.0e-54 215.7 240 51.7
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 5.2e-54 215.3 179 65.9
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.1e-50 203.4 200 60.5
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 4.4e-45 185.7 117 84.6
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 8.4e-36 154.8 246 44.3
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.5e-32 144.1 116 62.9
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.3e-31 141.0 144 56.2
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 6.4e-28 128.6 131 57.3
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 7.1e-27 125.2 220 38.2
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.3e-25 120.2 75 82.7
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 7.4e-24 115.2 79 81.0
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 9.6e-24 114.8 127 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 2.4e-22 110.2 245 33.9
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 2.5e-19 100.1 87 59.8
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 3.5e-18 96.3 102 55.9
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 5.1e-17 92.4 149 44.3
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 1.4e-14 84.3 117 47.0
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.4e-13 79.7 87 51.7
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 2.2e-12 77.0 69 62.3
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 1.6e-10 70.9 46 73.9
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 1.6e-10 70.9 63 60.3


User provided reference genes

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