Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13076 Vaccinium macrocarpon HOM05D000086 ORTHO05D000983 6.7e-196 687.2 351 100.0
Dinv43318 Davidia involucrata HOM05D000086 ORTHO05D000983 4.5e-59 232.6 234 60.3
CSS0017807 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000983 3.8e-58 229.6 247 55.5
Actinidia20960 Actinidia chinensis HOM05D000086 ORTHO05D000983 3.3e-54 216.5 251 55.8
Cc06_g13960 Coffea canephora HOM05D000086 ORTHO05D000983 4.8e-53 212.6 242 55.4
Dinv41302 Davidia involucrata HOM05D000086 ORTHO05D000983 2.4e-52 210.3 237 56.5
QL02p095731 Quercus lobata HOM05D000086 ORTHO05D000983 3.1e-52 209.9 293 50.2
Prupe.1G097100 Prunus persica HOM05D000086 ORTHO05D000983 1.0e-47 194.9 254 50.4
MSTRG.6180 Avicennia marina HOM05D000086 ORTHO05D000983 1.8e-47 194.1 252 50.0
CiPaw.08G040100 Carya illinoinensis HOM05D000086 ORTHO05D000983 2.3e-47 193.7 264 50.8
Oeu031849.1 Olea europaea HOM05D000086 ORTHO05D000983 2.3e-47 193.7 238 53.4
Potri.018G098500 Populus trichocarpa HOM05D000086 ORTHO05D000983 4.0e-47 193.0 251 49.4
Rhsim03G0262000 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.5e-46 191.0 276 50.0
Duzib168G0865 Durio zibethinus HOM05D000086 ORTHO05D000983 7.4e-46 188.7 252 49.6
Hma1.2p1_0921F.1_g236840 Hydrangea macrophylla HOM05D000086 ORTHO05D000983 7.4e-46 188.7 244 49.6
CiPaw.07G186900 Carya illinoinensis HOM05D000086 ORTHO05D000983 1.7e-45 187.6 255 51.4
FvH4_4g09580 Fragaria vesca HOM05D000086 ORTHO05D000983 1.7e-45 187.6 238 52.9
FAN07G0727 Fragaria x ananassa HOM05D000086 ORTHO05D000983 1.7e-45 187.6 238 52.5
FAN12G1188 Fragaria x ananassa HOM05D000086 ORTHO05D000983 1.7e-45 187.6 238 52.9
FAN12G2657 Fragaria x ananassa HOM05D000086 ORTHO05D000983 1.7e-45 187.6 238 52.9
Potri.006G176700 Populus trichocarpa HOM05D000086 ORTHO05D000983 1.7e-45 187.6 237 51.1
Sabra18G0085300 Salix brachista HOM05D000086 ORTHO05D000983 2.2e-45 187.2 246 48.8
MSTRG.19680 Avicennia marina HOM05D000086 ORTHO05D000983 3.7e-45 186.4 246 50.0
FAN22G0098 Fragaria x ananassa HOM05D000086 ORTHO05D000983 6.3e-45 185.7 238 52.5
Sabra06G0134900 Salix brachista HOM05D000086 ORTHO05D000983 6.3e-45 185.7 247 46.6
RcHm_v2.0_Chr4g0404881 Rosa chinensis HOM05D000086 ORTHO05D000983 8.2e-45 185.3 227 54.6
Oeu058829.1 Olea europaea HOM05D000086 ORTHO05D000983 1.1e-44 184.9 241 49.4
Haze_22162 Corylus avellana HOM05D000086 ORTHO05D000983 2.4e-44 183.7 252 49.6
MD13G1260900 Malus domestica HOM05D000086 ORTHO05D000983 2.4e-44 183.7 256 49.6
FAN26G1607 Fragaria x ananassa HOM05D000086 ORTHO05D000983 3.1e-44 183.3 238 52.1
Medtr4g129420 Medicago truncatula HOM05D000086 ORTHO05D000983 7.0e-44 182.2 238 51.7
Thecc.09G161200 Theobroma cacao HOM05D000086 ORTHO05D000983 9.1e-44 181.8 256 46.9
Cfa013544 Carpinus fangiana HOM05D000086 ORTHO05D000983 2.0e-43 180.6 256 48.8
Ciclev10008104m.g Citrus clementina HOM05D000086 ORTHO05D000983 2.6e-43 180.3 233 51.5
TAR626G0492 Trochodendron aralioides HOM05D000086 ORTHO05D000983 7.7e-43 178.7 243 51.0
COL.COLO4_09212 Corchorus olitorius HOM05D000086 ORTHO05D000983 1.3e-42 177.9 254 47.6
Eucgr.C01247 Eucalyptus grandis HOM05D000086 ORTHO05D000983 6.5e-42 175.6 255 47.8
DCAR_017945 Daucus carota HOM05D000086 ORTHO05D000983 1.1e-41 174.9 241 46.9
VMungo1215G1534 Vigna mungo HOM05D000086 ORTHO05D000983 1.1e-41 174.9 232 50.0
Cpa.g.sc75.18 Carica papaya HOM05D000086 ORTHO05D000983 1.5e-41 174.5 235 49.8
Duzib187G1434 Durio zibethinus HOM05D000086 ORTHO05D000983 2.5e-41 173.7 251 46.2
Glyma.13G092000 Glycine max HOM05D000086 ORTHO05D000983 2.5e-41 173.7 240 48.3
TWI63G0768 Tripterygium wilfordii HOM05D000086 ORTHO05D000983 7.2e-41 172.2 241 48.1
Gohir.D08G096950 Gossypium hirsutum HOM05D000086 ORTHO05D000983 9.4e-41 171.8 250 46.4
Phvul.003G150800 Phaseolus vulgaris HOM05D000086 ORTHO05D000983 9.4e-41 171.8 231 50.2
Glyma.17G068300 Glycine max HOM05D000086 ORTHO05D000983 1.6e-40 171.0 270 45.6
Gohir.A08G087300 Gossypium hirsutum HOM05D000086 ORTHO05D000983 1.6e-40 171.0 250 46.4
Gorai.004G103200 Gossypium raimondii HOM05D000086 ORTHO05D000983 2.7e-40 170.2 250 46.4
Manes.06G025000 Manihot esculenta HOM05D000086 ORTHO05D000983 2.7e-40 170.2 260 44.6
Actinidia38651 Actinidia chinensis HOM05D000086 ORTHO05D000983 4.7e-40 169.5 222 50.5
Ca_21186_v3 Cicer arietinum L. HOM05D000086 ORTHO05D000983 4.7e-40 169.5 292 43.2
Manes.14G148300 Manihot esculenta HOM05D000086 ORTHO05D000983 1.4e-39 167.9 264 46.6
TPR.G5329 Trifolium pratense HOM05D000086 ORTHO05D000983 1.4e-39 167.9 236 47.9
Lj7P467T12 Lonicera japonica HOM05D000086 ORTHO05D000983 1.8e-39 167.5 263 48.3
Lalb_Chr07g0180101 Lupinus albus HOM05D000086 ORTHO05D000983 3.0e-39 166.8 228 50.9
Lalb_Chr12g0199091 Lupinus albus HOM05D000086 ORTHO05D000983 1.5e-38 164.5 224 52.7
Atru.chr7.497 Acer truncatum HOM05D000086 ORTHO05D000983 2.6e-38 163.7 245 46.5
CANSAT11G1003 Cannabis sativa HOM05D000086 ORTHO05D000983 3.4e-38 163.3 262 45.4
arahy.Tifrunner.gnm1.ann1.11SGI5 Arachis hypogaea HOM05D000086 ORTHO05D000983 5.7e-38 162.5 277 44.8
TWI34G0467 Tripterygium wilfordii HOM05D000086 ORTHO05D000983 3.1e-36 156.8 238 45.8
vmacro06038 Vaccinium macrocarpon HOM05D000086 ORTHO05D000983 5.4e-36 156.0 237 48.1
MBI15_g34418_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D000983 9.1e-36 155.2 228 47.4
Lj4g0015174 Lotus japonicus HOM05D000086 ORTHO05D000983 3.5e-35 153.3 238 46.2
ECA240G1695 Erigeron canadensis HOM05D000086 ORTHO05D000983 4.5e-35 152.9 249 42.6
Peaxi162Scf00457g00052 Petunia axillaris HOM05D000086 ORTHO05D000983 7.7e-35 152.1 248 44.4
Lsat_1_v5_gn_5_52300 Lactuca sativa HOM05D000086 ORTHO05D000983 3.8e-34 149.8 238 43.3
Oeu038131.1 Olea europaea HOM05D000086 ORTHO05D000983 5.0e-34 149.4 189 48.7
DCAR_020105 Daucus carota HOM05D000086 ORTHO05D000983 1.5e-33 147.9 238 44.5
Nitab4.5_0010802g0010 Nicotiana tabacum HOM05D000086 ORTHO05D000983 1.9e-33 147.5 246 45.1
Gorai.004G273000 Gossypium raimondii HOM05D000086 ORTHO05D000983 7.2e-33 145.6 348 35.3
MBI14_g08078_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D000983 1.6e-32 144.4 234 44.4
MD16G1263000 Malus domestica HOM05D000086 ORTHO05D000983 6.1e-32 142.5 209 47.8
Gohir.D08G255700 Gossypium hirsutum HOM05D000086 ORTHO05D000983 3.0e-31 140.2 245 42.4
Migut.J01421 Erythranthe guttata HOM05D000086 ORTHO05D000983 6.8e-31 139.0 188 50.0
Actinidia33375 Actinidia chinensis HOM05D000086 ORTHO05D000983 8.8e-31 138.7 221 45.7
Gohir.A08G235300 Gossypium hirsutum HOM05D000086 ORTHO05D000983 1.2e-30 138.3 245 42.4
Aqoxy7G03233 Aquilegia oxysepala HOM05D000086 ORTHO05D000983 1.5e-30 137.9 277 39.4
PSO782G4041 Papaver somniferum HOM05D000086 ORTHO05D000983 2.0e-30 137.5 249 43.0
ECA236G1765 Erigeron canadensis HOM05D000086 ORTHO05D000983 2.6e-30 137.1 183 45.9
Nitab4.5_0005985g0070 Nicotiana tabacum HOM05D000086 ORTHO05D000983 2.6e-30 137.1 260 41.9
HanXRQChr09g0244351 Helianthus annuus HOM05D000086 ORTHO05D000983 5.7e-30 136.0 212 44.8
PSO063G6927 Papaver somniferum HOM05D000086 ORTHO05D000983 1.7e-29 134.4 252 42.1
HanXRQChr05g0136501 Helianthus annuus HOM05D000086 ORTHO05D000983 4.9e-29 132.9 180 47.2
Sc18g0003320 Simmondsia chinensis HOM05D000086 ORTHO05D000983 1.1e-28 131.7 251 39.4
HanXRQChr03g0066331 Helianthus annuus HOM05D000086 ORTHO05D000983 1.8e-28 131.0 252 38.1
HanXRQChr06g0179421 Helianthus annuus HOM05D000086 ORTHO05D000983 1.6e-27 127.9 253 38.7
Psat4g010640 Pisum sativum HOM05D000086 ORTHO05D000983 1.6e-27 127.9 214 42.5
ClCG06G012920 Citrullus lanatus HOM05D000086 ORTHO05D000983 7.7e-27 125.6 265 41.9
Peaxi162Scf00297g00082 Petunia axillaris HOM05D000086 ORTHO05D000983 1.7e-26 124.4 249 37.3
Lsat_1_v5_gn_8_65840 Lactuca sativa HOM05D000086 ORTHO05D000983 6.6e-26 122.5 179 43.6
Nn8g40250 Nelumbo nucifera HOM05D000086 ORTHO05D000983 8.6e-26 122.1 184 50.0
Solyc07g006360.1 Solanum lycopersicum HOM05D000086 ORTHO05D000983 2.5e-25 120.6 215 42.3
Ah.14g084070 Amaranthus hybridus HOM05D000086 ORTHO05D000983 4.2e-25 119.8 170 43.5
PGSC0003DMG400043193 Solanum tuberosum HOM05D000086 ORTHO05D000983 5.6e-25 119.4 218 44.0
Eucgr.C00207 Eucalyptus grandis HOM05D000086 ORTHO05D000983 7.2e-25 119.0 237 36.7
PGR102G2274 Punica granatum HOM05D000086 ORTHO05D000983 2.1e-24 117.5 266 36.5
Migut.K00273 Erythranthe guttata HOM05D000086 ORTHO05D000983 3.6e-24 116.7 198 42.4
Sopen07g002450 Solanum pennellii HOM05D000086 ORTHO05D000983 3.0e-23 113.6 215 42.8
Oeu031851.1 Olea europaea HOM05D000086 ORTHO05D000983 8.9e-23 112.1 185 44.3
CsaV3_1G029490 Cucumis sativus L. HOM05D000086 ORTHO05D000983 7.5e-22 109.0 224 40.2
DCAR_014718 Daucus carota HOM05D000086 ORTHO05D000983 7.5e-22 109.0 140 47.9
SHI02983 Sapria himalayana HOM05D000086 ORTHO05D000983 9.8e-22 108.6 256 37.5
MELO3C010166.2 Cucumis melo HOM05D000086 ORTHO05D000983 1.3e-21 108.2 222 39.2
GSVIVG01023776001 Vitis vinifera HOM05D000086 ORTHO05D000983 6.4e-21 105.9 150 47.3
Medtr6g012765 Medicago truncatula HOM05D000086 ORTHO05D000983 1.4e-20 104.8 151 50.3
Ah.09g229540 Amaranthus hybridus HOM05D000086 ORTHO05D000983 4.1e-20 103.2 183 40.4
THA.LOC104803517 Tarenaya hassleriana HOM05D000086 ORTHO05D000983 2.7e-19 100.5 177 45.8
CDE02G0829 Ceratophyllum demersum HOM05D000086 ORTHO05D000983 4.6e-19 99.8 296 32.8
SGA_v2.0_scaffold66G22513 Striga asiatica HOM05D000086 ORTHO05D000983 1.3e-18 98.2 195 43.1
AL7G21750 Arabidopsis lyrata HOM05D000086 ORTHO05D000983 1.7e-18 97.8 188 43.1
CDE05G2929 Ceratophyllum demersum HOM05D000086 ORTHO05D000983 5.0e-18 96.3 244 36.5
ClCG11G012580 Citrullus lanatus HOM05D000086 ORTHO05D000983 2.5e-17 94.0 199 38.7
EL10Ac8g18865 Beta vulgaris HOM05D000086 ORTHO05D000983 5.6e-17 92.8 266 35.0
Lj9P729T20 Lonicera japonica HOM05D000086 ORTHO05D000983 7.3e-17 92.4 96 57.3
TAR383G1101 Trochodendron aralioides HOM05D000086 ORTHO05D000983 7.3e-17 92.4 143 46.2
CsaV3_2G007910 Cucumis sativus L. HOM05D000086 ORTHO05D000983 9.5e-17 92.0 157 43.3
AT4G30400 Arabidopsis thaliana HOM05D000086 ORTHO05D000983 1.2e-16 91.7 185 42.7
ATR0580G125 Amborella trichopoda HOM05D000086 ORTHO05D000983 2.1e-16 90.9 158 42.4
Carub.0007s1020 Capsella rubella HOM05D000086 ORTHO05D000983 2.1e-16 90.9 183 41.5
MELO3C004094.2 Cucumis melo HOM05D000086 ORTHO05D000983 6.2e-16 89.4 157 43.3
Sp7g28280 Schrenkiella parvula HOM05D000086 ORTHO05D000983 8.0e-16 89.0 185 42.2
Zm00001eb177000 Zea mays HOM05D000086 ORTHO05D000983 1.8e-15 87.8 166 38.6
Actinidia33313 Actinidia chinensis HOM05D000086 ORTHO05D000983 2.3e-15 87.4 416 29.1
BcaNung02992 Brassica carinata HOM05D000086 ORTHO05D000983 2.3e-15 87.4 179 43.6
A03p59810 Brassica napus HOM05D000086 ORTHO05D000983 2.3e-15 87.4 179 42.5
THA.LOC104819986 Tarenaya hassleriana HOM05D000086 ORTHO05D000983 2.3e-15 87.4 143 44.1
HPP92_017445 Vanilla planifolia HOM05D000086 ORTHO05D000983 5.2e-15 86.3 158 39.2
BraA03t15034Z Brassica rapa HOM05D000086 ORTHO05D000983 6.8e-15 85.9 179 42.5
BcaB07g31650 Brassica carinata HOM05D000086 ORTHO05D000983 8.9e-15 85.5 213 37.6
BcaC04g22890 Brassica carinata HOM05D000086 ORTHO05D000983 8.9e-15 85.5 155 42.6
C09p14160 Brassica napus HOM05D000086 ORTHO05D000983 8.9e-15 85.5 155 42.6
BolC9t54313H Brassica oleracea HOM05D000086 ORTHO05D000983 8.9e-15 85.5 155 42.6
HPP92_017455 Vanilla planifolia HOM05D000086 ORTHO05D000983 8.9e-15 85.5 158 39.2
BolC7t46245H Brassica oleracea HOM05D000086 ORTHO05D000983 1.2e-14 85.1 179 40.2
unitig_21.g20646 Utricularia gibba HOM05D000086 ORTHO05D000983 2.0e-14 84.3 144 42.4
C01p08660 Brassica napus HOM05D000086 ORTHO05D000983 3.4e-14 83.6 180 42.8
A09p12030 Brassica napus HOM05D000086 ORTHO05D000983 4.4e-14 83.2 155 41.3
BraA09t36846Z Brassica rapa HOM05D000086 ORTHO05D000983 4.4e-14 83.2 155 41.3
BraA01t00721Z Brassica rapa HOM05D000086 ORTHO05D000983 5.8e-14 82.8 178 41.0
Thhalv10025087m.g Eutrema salsugineum HOM05D000086 ORTHO05D000983 7.5e-14 82.4 185 41.6
BcaC09g51829 Brassica carinata HOM05D000086 ORTHO05D000983 9.8e-14 82.0 181 41.4
BolC1t00848H Brassica oleracea HOM05D000086 ORTHO05D000983 9.8e-14 82.0 181 41.4
TAR383G0802 Trochodendron aralioides HOM05D000086 ORTHO05D000983 9.8e-14 82.0 68 61.8
A01p07770 Brassica napus HOM05D000086 ORTHO05D000983 1.3e-13 81.6 178 41.6
CDE05G2846 Ceratophyllum demersum HOM05D000086 ORTHO05D000983 1.3e-13 81.6 239 31.4
C07p57850 Brassica napus HOM05D000086 ORTHO05D000983 2.2e-13 80.9 158 41.8
HPP92_017162 Vanilla planifolia HOM05D000086 ORTHO05D000983 2.9e-13 80.5 166 43.4
BcaB03g16655 Brassica carinata HOM05D000086 ORTHO05D000983 3.7e-13 80.1 157 39.5
Sed0025626 Sechium edule HOM05D000086 ORTHO05D000983 4.9e-13 79.7 157 40.1
Aa31LG2G20130 Aethionema arabicum HOM05D000086 ORTHO05D000983 6.4e-13 79.3 185 37.8
BcaNung00545 Brassica carinata HOM05D000086 ORTHO05D000983 8.3e-13 79.0 176 40.3
CARHR238300 Cardamine hirsuta HOM05D000086 ORTHO05D000983 1.4e-12 78.2 186 40.9
Sed0019328 Sechium edule HOM05D000086 ORTHO05D000983 1.4e-12 78.2 161 39.1
A07p01970 Brassica napus HOM05D000086 ORTHO05D000983 4.1e-12 76.6 153 40.5
BraA07t27996Z Brassica rapa HOM05D000086 ORTHO05D000983 4.1e-12 76.6 153 40.5
C07p04100 Brassica napus HOM05D000086 ORTHO05D000983 5.4e-12 76.3 131 42.0
BolC7t40805H Brassica oleracea HOM05D000086 ORTHO05D000983 5.4e-12 76.3 131 42.0
THA.LOC104811822 Tarenaya hassleriana HOM05D000086 ORTHO05D000983 5.4e-12 76.3 168 38.1
BcaC06g36442 Brassica carinata HOM05D000086 ORTHO05D000983 7.0e-12 75.9 131 42.0
Thhalv10022703m.g Eutrema salsugineum HOM05D000086 ORTHO05D000983 3.5e-11 73.6 160 40.0
Os08g0445000 Oryza sativa ssp. japonica HOM05D000086 ORTHO05D000983 7.8e-11 72.4 175 37.7
Carub.0003s3291 Capsella rubella HOM05D000086 ORTHO05D000983 1.0e-10 72.0 155 39.4
SEGI_24048 Sequoiadendron giganteum HOM05D000086 ORTHO05D000983 1.3e-10 71.6 218 29.8
CARHR109240 Cardamine hirsuta HOM05D000086 ORTHO05D000983 2.3e-10 70.9 155 37.4
AT2G18650 Arabidopsis thaliana HOM05D000086 ORTHO05D000983 1.9e-09 67.8 168 36.9
Os06g0187300 Oryza sativa ssp. japonica HOM05D000086 ORTHO05D000983 4.3e-09 66.6 192 32.3
Aa31LG3G13580 Aethionema arabicum HOM05D000086 ORTHO05D000983 8.1e-08 62.4 137 32.1
Gohir.A09G025500 Gossypium hirsutum HOM05D000086 ORTHO05D000983 8.1e-08 62.4 119 38.7
Os02g0790600 Oryza sativa ssp. japonica HOM05D000086 ORTHO05D000983 1.4e-07 61.6 180 35.0
Zm00001eb192670 Zea mays HOM05D000086 ORTHO05D000983 1.4e-07 61.6 281 28.1
Zm00001eb257520 Zea mays HOM05D000086 ORTHO05D000983 2.3e-07 60.8 210 31.4
Sp3g32140 Schrenkiella parvula HOM05D000086 ORTHO05D000983 5.2e-07 59.7 155 38.1
Sed0018113 Sechium edule HOM05D000086 ORTHO05D000983 6.8e-07 59.3 51 54.9
Aqoxy3G03045 Aquilegia oxysepala HOM05D000086 ORTHO05D000983 8.9e-07 58.9 138 35.5
Sp6g19430 Schrenkiella parvula HOM05D000086 ORTHO05D000983 1.2e-06 58.5 81 42.0
Migut.E00151 Erythranthe guttata HOM05D000086 ORTHO05D000983 2.6e-06 57.4 151 31.8
Oeu001751.1 Olea europaea HOM05D000086 ORTHO05D000983 3.4e-06 57.0 158 31.0
Aa31LG8G15430 Aethionema arabicum HOM05D000086 ORTHO05D000983 5.8e-06 56.2 159 35.2
Zm00001eb374390 Zea mays HOM05D000086 ORTHO05D000983 5.8e-06 56.2 181 32.6
AL3G52030 Arabidopsis lyrata HOM05D000086 ORTHO05D000983 7.5e-06 55.8 154 34.4
CANSAT64G2955 Cannabis sativa HOM05D000086 ORTHO05D000983 7.5e-06 55.8 167 32.3


User provided reference genes

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