Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 5.2e-38 160.6 84 100.0
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.3e-33 145.2 77 97.4
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.2e-29 132.9 81 88.9
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.2e-29 132.9 81 88.9
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.5e-29 132.5 80 88.8
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.5e-29 132.5 80 88.8
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 2.6e-29 131.7 74 91.9
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 5.8e-29 130.6 75 88.0
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 5.8e-29 130.6 74 89.2
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.3e-28 129.4 74 87.8
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.3e-28 129.4 74 90.5
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.3e-28 129.4 82 84.1
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.3e-28 129.4 82 84.1
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.3e-28 129.4 78 87.2
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.7e-28 129.0 74 87.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.7e-28 129.0 82 84.1
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 2.9e-28 128.3 80 86.2
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.7e-28 127.9 80 85.0
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 4.9e-28 127.5 74 89.2
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 4.9e-28 127.5 81 84.0
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 6.4e-28 127.1 74 86.5
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.1e-27 126.3 74 89.2
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 1.4e-27 125.9 82 82.9
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 1.4e-27 125.9 79 81.0
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.9e-27 125.6 72 87.5
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.4e-27 125.2 72 88.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 4.1e-27 124.4 72 90.3
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 4.1e-27 124.4 74 83.8
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 5.4e-27 124.0 73 83.6
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 5.4e-27 124.0 74 87.8
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 7.0e-27 123.6 72 90.3
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 7.0e-27 123.6 74 87.8
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 9.2e-27 123.2 74 86.5
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 9.2e-27 123.2 74 87.8
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.2e-26 122.9 74 86.5
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.0e-26 122.1 72 84.7
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 4.6e-26 120.9 74 82.4
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.0e-26 120.6 74 82.4
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 6.0e-26 120.6 74 82.4
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 7.8e-26 120.2 78 83.3
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.0e-25 119.8 81 80.2
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.0e-25 119.8 81 80.2
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.0e-25 119.8 75 82.7
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.3e-25 119.4 81 79.0
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 1.3e-25 119.4 74 83.8
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.7e-25 119.0 74 85.1
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 2.3e-25 118.6 74 83.8
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 5.0e-25 117.5 74 81.1
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.0e-25 117.5 74 83.8
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.0e-25 117.5 78 78.2
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 6.6e-25 117.1 72 84.7
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 6.6e-25 117.1 74 83.8
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.6e-25 116.7 80 76.2
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.6e-25 116.7 80 76.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 8.6e-25 116.7 73 82.2
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.6e-25 116.7 72 84.7
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.1e-24 116.3 80 78.8
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.5e-24 115.9 74 79.7
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.9e-24 115.5 74 81.1
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.9e-24 115.5 78 78.2
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 2.5e-24 115.2 75 76.0
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 3.3e-24 114.8 79 75.9
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.3e-24 114.8 74 81.1
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 4.3e-24 114.4 74 82.4
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 7.3e-24 113.6 74 81.1
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 7.3e-24 113.6 72 80.6
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.2e-23 112.8 74 78.4
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 1.2e-23 112.8 81 76.5
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.2e-23 112.8 74 81.1
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 1.2e-23 112.8 74 81.1
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.6e-23 112.5 81 75.3
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.6e-23 112.5 79 75.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.6e-23 112.5 72 83.3
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.8e-23 111.7 74 79.7
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 4.7e-23 110.9 72 83.3
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 4.7e-23 110.9 72 81.9
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.1e-22 109.8 72 81.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.1e-22 108.2 72 77.8
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 4.0e-22 107.8 74 75.7
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 5.2e-22 107.5 60 90.0
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 5.2e-22 107.5 74 78.4
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 5.2e-22 107.5 74 77.0
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 6.8e-22 107.1 60 88.3
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.5e-21 105.9 60 86.7
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 2.6e-21 105.1 79 77.2
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 4.4e-21 104.4 74 79.7
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 4.4e-21 104.4 67 79.1
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 4.4e-21 104.4 69 78.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.4e-21 104.4 80 72.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.3e-20 102.8 74 71.6
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.7e-20 102.4 74 71.6
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 2.2e-20 102.1 74 73.0
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.2e-20 102.1 74 70.3
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.2e-20 102.1 74 70.3
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 8.3e-20 100.1 74 70.3
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.1e-19 99.8 72 68.1
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.9e-19 99.0 60 81.7
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 2.4e-19 98.6 60 85.0
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.1e-19 97.8 90 66.7
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 5.4e-19 97.4 72 76.4
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 7.1e-19 97.1 81 65.4
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 7.1e-19 97.1 78 65.4
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 9.2e-19 96.7 74 70.3
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 9.2e-19 96.7 74 66.2
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.6e-18 95.9 74 67.6
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.7e-18 95.1 79 64.6
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.7e-18 95.1 79 64.6
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.7e-18 95.1 79 64.6
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.7e-18 95.1 79 64.6
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 4.6e-18 94.4 75 64.0
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 2.3e-17 92.0 67 70.1
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 3.0e-17 91.7 67 70.1
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 3.0e-17 91.7 57 89.5
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 5.1e-17 90.9 74 63.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 5.1e-17 90.9 77 58.4
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 6.6e-17 90.5 74 63.5
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 6.6e-17 90.5 74 63.5
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 6.6e-17 90.5 74 63.5
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.1e-16 89.7 78 57.7
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 5.6e-16 87.4 56 80.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.2e-15 86.3 74 60.8
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.2e-15 86.3 51 86.3
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.6e-15 85.9 52 84.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 4.7e-15 84.3 76 55.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.0e-13 79.0 106 47.2
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 5.8e-13 77.4 51 80.4
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.9e-12 75.1 61 59.0
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 6.4e-12 73.9 72 56.9
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 7.3e-08 60.5 33 93.9
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 3.6e-07 58.2 51 60.8
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 6.2e-07 57.4 51 60.8
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 2.4e-06 55.5 67 50.7
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 6.9e-06 53.9 50 64.0


User provided reference genes

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