Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 0.0e+00 1704.5 848 100.0
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 2.6e-302 1042.0 852 65.3
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 5.6e-297 1024.2 949 61.4
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 2.4e-292 1008.8 850 63.9
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 1.8e-287 992.6 853 63.0
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 3.7e-285 984.9 528 89.4
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 2.4e-284 982.2 528 89.0
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 3.0e-282 975.3 528 88.1
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.5e-281 973.0 528 88.3
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 2.5e-281 972.2 528 88.6
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 3.3e-281 971.8 528 88.8
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 8.1e-280 967.2 528 86.7
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 3.1e-279 965.3 517 88.8
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 6.8e-279 964.1 528 86.7
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 1.5e-278 963.0 528 87.5
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 2.0e-278 962.6 528 86.9
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 2.6e-278 962.2 517 87.8
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 5.8e-278 961.1 537 85.3
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 9.9e-278 960.3 528 86.2
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.7e-277 959.5 517 88.6
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 2.4e-276 955.7 528 86.4
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 4.1e-276 954.9 528 85.8
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 5.4e-276 954.5 528 85.6
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 7.1e-276 954.1 528 86.7
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 1.6e-275 953.0 528 86.4
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 1.6e-275 953.0 528 86.6
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 1.6e-275 953.0 528 85.4
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.6e-275 953.0 528 85.6
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 2.1e-275 952.6 528 86.0
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 2.7e-275 952.2 528 86.4
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 2.7e-275 952.2 528 85.8
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 2.3e-274 949.1 517 86.1
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 2.3e-274 949.1 528 86.2
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 3.0e-274 948.7 528 86.0
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 3.0e-274 948.7 528 85.2
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 3.9e-274 948.3 528 85.8
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 5.1e-274 948.0 528 85.8
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 8.6e-274 947.2 517 87.2
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 1.5e-273 946.4 528 85.8
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.5e-273 946.4 517 87.6
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 1.5e-273 946.4 528 87.1
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 1.9e-273 946.0 528 86.0
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 3.3e-273 945.3 520 86.7
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 4.3e-273 944.9 528 85.0
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 7.3e-273 944.1 528 85.4
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 9.6e-273 943.7 517 86.5
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 1.6e-272 943.0 578 79.4
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 2.8e-272 942.2 528 85.8
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.4e-271 939.9 528 85.0
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 1.4e-271 939.9 517 85.5
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 3.1e-271 938.7 528 85.0
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 4.0e-271 938.3 528 84.3
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 4.0e-271 938.3 528 84.8
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 5.2e-271 937.9 526 85.7
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.8e-271 937.6 528 85.2
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 8.9e-271 937.2 528 85.0
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.4e-270 935.3 517 85.1
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 5.8e-270 934.5 528 83.9
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 7.6e-270 934.1 528 85.2
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.3e-269 933.3 528 83.7
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 2.2e-269 932.6 517 85.3
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 8.4e-269 930.6 528 83.9
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 8.4e-269 930.6 528 84.8
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 1.4e-268 929.9 517 85.7
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 1.9e-268 929.5 517 85.1
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 4.2e-268 928.3 528 83.1
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 5.4e-268 927.9 528 82.6
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 5.4e-268 927.9 528 83.7
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 7.1e-268 927.5 528 82.8
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 9.3e-268 927.2 553 81.6
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 1.6e-267 926.4 528 82.4
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 1.6e-267 926.4 517 84.5
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 2.1e-267 926.0 528 85.2
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 2.7e-267 925.6 529 83.0
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 4.6e-267 924.9 517 83.9
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 7.8e-267 924.1 840 58.8
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 7.8e-267 924.1 517 86.1
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 7.8e-267 924.1 528 82.6
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 3.9e-266 921.8 519 84.6
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 8.7e-266 920.6 528 82.0
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 8.7e-266 920.6 528 81.4
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 8.7e-266 920.6 528 81.6
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 8.7e-266 920.6 528 83.0
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 1.1e-265 920.2 519 84.0
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.9e-265 919.5 529 82.6
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 2.5e-265 919.1 528 82.8
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 4.3e-265 918.3 518 83.4
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 5.6e-265 917.9 524 83.4
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 7.3e-265 917.5 528 81.6
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 7.3e-265 917.5 518 83.4
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 7.3e-265 917.5 518 83.4
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 2.8e-264 915.6 518 83.4
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 1.4e-263 913.3 528 81.8
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 9.0e-263 910.6 521 81.6
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 7.6e-262 907.5 517 82.8
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 9.9e-262 907.1 508 83.9
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 2.9e-261 905.6 829 60.3
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 4.2e-260 901.7 517 82.0
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 1.0e-258 897.1 528 81.2
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.3e-258 896.7 517 82.0
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 2.3e-258 896.0 528 81.1
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 6.6e-258 894.4 529 80.0
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 1.4e-255 886.7 530 80.6
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 2.4e-255 885.9 531 79.8
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 3.1e-255 885.6 530 80.4
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 3.4e-254 882.1 838 58.6
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.7e-253 879.8 531 79.3
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 1.1e-252 877.1 518 79.7
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 6.2e-248 861.3 517 79.1
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 3.2e-244 849.0 530 77.0
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 3.0e-242 842.4 448 90.4
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 3.3e-241 839.0 521 77.2
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 2.1e-240 836.3 518 76.6
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 1.3e-237 827.0 448 87.9
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 1.3e-234 817.0 528 76.1
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 6.7e-234 814.7 560 73.2
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.6e-232 810.1 439 87.5
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 6.3e-232 808.1 432 88.2
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 3.4e-222 775.8 521 69.9
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 3.4e-222 775.8 486 78.0
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.2e-219 767.3 520 70.8
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 1.3e-216 757.3 521 67.9
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 4.0e-210 735.7 515 69.9
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.7e-192 677.2 452 72.3
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.0e-190 670.2 752 52.4
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 5.9e-182 642.1 659 51.3
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.5e-177 627.5 361 82.3
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 1.4e-170 604.4 344 83.7
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 2.7e-150 537.0 517 56.9
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 8.7e-149 531.9 417 66.9
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 3.1e-146 523.5 278 90.6
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 5.6e-140 502.7 280 84.3
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 2.4e-138 497.3 545 49.2
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 1.1e-135 488.4 274 85.0
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.1e-132 478.4 491 56.2
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 2.4e-122 444.1 249 85.1
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 6.5e-112 409.5 288 68.4
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 3.0e-109 400.6 551 44.1
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.3e-91 342.0 614 36.6
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 1.7e-91 341.7 184 86.4
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 2.8e-91 340.9 263 67.7
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 1.2e-86 325.5 179 86.6
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 5.7e-84 316.6 179 86.0
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 1.2e-81 308.9 167 89.2
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 5.0e-80 303.5 188 74.5
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 3.0e-77 294.3 499 37.1
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 1.5e-76 292.0 549 36.4
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.2e-75 288.1 585 34.5
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 1.0e-72 279.3 321 52.0
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.4e-66 258.8 140 87.1
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 3.6e-62 244.2 202 61.4
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 1.1e-61 242.7 580 32.4
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 5.8e-60 236.9 594 30.1
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.9e-51 208.0 117 83.8
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 4.9e-51 207.2 120 85.0
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 2.0e-44 185.3 98 87.8
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 4.4e-44 184.1 107 81.3
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 1.1e-39 169.5 155 56.8
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 1.3e-30 139.4 77 79.2
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 2.4e-29 135.2 67 91.0
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 9.9e-28 129.8 65 90.8
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 4.2e-26 124.4 137 49.6
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.8e-22 111.7 60 85.0
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 2.4e-21 108.6 63 77.8
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 3.7e-14 84.7 58 63.8
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.0e-13 81.3 47 80.9
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 5.8e-12 77.4 119 41.2
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.7e-11 75.9 54 70.4
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 4.9e-11 74.3 48 75.0
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 1.2e-09 69.7 38 78.9
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 2.3e-08 65.5 64 50.0


User provided reference genes

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